RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 GRIPAP1Q4V328 841 aa14.53□□□□□ -0.08
VMP1-211ENST00000591315 ATF7IPQ6VMQ6 1270 aa14.53□□□□□ -0.08
VMP1-211ENST00000591315 ARHGAP45Q92619 1136 aa14.53□□□□□ -0.08
VMP1-211ENST00000591315 MEIS3Q99687 375 aa14.53□□□□□ -0.08
VMP1-211ENST00000591315 BSDC1Q9NW68 430 aaPredicted RBP14.53□□□□□ -0.08
VMP1-211ENST00000591315 KDM2BQ8NHM5 1336 aa14.52□□□□□ -0.08
VMP1-211ENST00000591315 ANKRD18BA2A2Z9 1011 aa14.52□□□□□ -0.09
VMP1-211ENST00000591315 YDJCA8MPS7 323 aa14.52□□□□□ -0.09
VMP1-211ENST00000591315 RLBP1P12271 317 aa14.52□□□□□ -0.09
VMP1-211ENST00000591315 KIAA2012Q0VF49 1180 aa14.52□□□□□ -0.09
VMP1-211ENST00000591315 DOK7Q18PE1 504 aa14.52□□□□□ -0.09
VMP1-211ENST00000591315 INTS3Q68E01 1043 aaKnown RBP14.52□□□□□ -0.09
VMP1-211ENST00000591315 HELBQ8NG08 1087 aaPredicted RBP14.52□□□□□ -0.09
VMP1-211ENST00000591315 JDP2Q8WYK2 163 aa14.52□□□□□ -0.09
VMP1-211ENST00000591315 DBNDD1Q9H9R9 158 aa14.52□□□□□ -0.09
VMP1-211ENST00000591315 KCNQ5Q9NR82 932 aa14.52□□□□□ -0.09
VMP1-211ENST00000591315 ANKIB1Q9P2G1 1089 aa14.52□□□□□ -0.09
VMP1-211ENST00000591315 KLRK1P26718 216 aa14.51□□□□□ -0.09
VMP1-211ENST00000591315 IGHMBP2P38935 993 aaKnown RBP14.51□□□□□ -0.09
VMP1-211ENST00000591315 IFIT5Q13325 482 aaKnown RBP14.51□□□□□ -0.09
VMP1-211ENST00000591315 RABL6Q3YEC7 729 aaPredicted RBP14.51□□□□□ -0.09
VMP1-211ENST00000591315 NIM1KQ8IY84 436 aa14.51□□□□□ -0.09
VMP1-211ENST00000591315 TMEM57Q8N5G2 664 aa14.51□□□□□ -0.09
VMP1-211ENST00000591315 SUPT20HQ8NEM7 779 aa14.51□□□□□ -0.09
VMP1-211ENST00000591315 KLHDC4Q8TBB5 520 aa14.51□□□□□ -0.09
VMP1-211ENST00000591315 PUS3Q9BZE2 481 aaKnown RBP14.51□□□□□ -0.09
VMP1-211ENST00000591315 PODXL2Q9NZ53 605 aa14.51□□□□□ -0.09
VMP1-211ENST00000591315 GGA1Q9UJY5 639 aa14.51□□□□□ -0.09
VMP1-211ENST00000591315 GJA3Q9Y6H8 435 aa14.51□□□□□ -0.09
VMP1-211ENST00000591315 IPO8O15397 1037 aaKnown RBP14.5□□□□□ -0.09
VMP1-211ENST00000591315 TAF5LO75529 589 aa14.5□□□□□ -0.09
VMP1-211ENST00000591315 RAD17O75943 681 aa14.5□□□□□ -0.09
VMP1-211ENST00000591315 CXCL9Q07325 125 aa14.5□□□□□ -0.09
VMP1-211ENST00000591315 WASHC4Q2M389 1173 aa14.5□□□□□ -0.09
VMP1-211ENST00000591315 ZKSCAN2Q63HK3 967 aa14.5□□□□□ -0.09
VMP1-211ENST00000591315 DPY19L2Q6NUT2 758 aa14.5□□□□□ -0.09
VMP1-211ENST00000591315 MPHOSPH8Q99549 860 aa14.5□□□□□ -0.09
VMP1-211ENST00000591315 LRRFIP2Q9Y608 721 aaKnown RBP14.5□□□□□ -0.09
VMP1-211ENST00000591315 SCN9AQ15858 1988 aa14.5□□□□□ -0.09
VMP1-211ENST00000591315 WDR90Q96KV7 1748 aa14.49□□□□□ -0.09
VMP1-211ENST00000591315 XDHP47989 1333 aa14.49□□□□□ -0.09
VMP1-211ENST00000591315 UBTFL1P0CB47 393 aaPredicted RBP14.49□□□□□ -0.09
VMP1-211ENST00000591315 CHRNDQ07001 517 aa14.49□□□□□ -0.09
VMP1-211ENST00000591315 CCDC57Q2TAC2 916 aa14.49□□□□□ -0.09
VMP1-211ENST00000591315 TXNRD3Q86VQ6 643 aa14.49□□□□□ -0.09
VMP1-211ENST00000591315 ZNRF3Q9ULT6 936 aa14.49□□□□□ -0.09
VMP1-211ENST00000591315 A0A1B0GUL6 1792 aa14.48□□□□□ -0.09
VMP1-211ENST00000591315 PLIN1O60240 522 aa14.48□□□□□ -0.09
VMP1-211ENST00000591315 POTEIP0CG38 1075 aa14.48□□□□□ -0.09
VMP1-211ENST00000591315 POTEJP0CG39 1038 aa14.48□□□□□ -0.09
VMP1-211ENST00000591315 EIF6P56537 245 aaKnown RBP14.48□□□□□ -0.09
VMP1-211ENST00000591315 TAF7LQ5H9L4 462 aa14.48□□□□□ -0.09
VMP1-211ENST00000591315 PANK1Q8TE04 598 aa14.48□□□□□ -0.09
VMP1-211ENST00000591315 ECE2O60344 883 aa14.47□□□□□ -0.09
VMP1-211ENST00000591315 VEGFAP15692 232 aaPredicted RBP14.47□□□□□ -0.09
VMP1-211ENST00000591315 ATP2B4P23634 1241 aa14.47□□□□□ -0.09
VMP1-211ENST00000591315 RFX5P48382 616 aaPredicted RBP14.47□□□□□ -0.09
VMP1-211ENST00000591315 C1QTNF8P60827 252 aa14.47□□□□□ -0.09
VMP1-211ENST00000591315 LRRC24Q50LG9 513 aa14.47□□□□□ -0.09
VMP1-211ENST00000591315 LDHAL6AQ6ZMR3 332 aa14.47□□□□□ -0.09
VMP1-211ENST00000591315 ZC3H12CQ9C0D7 883 aaKnown RBP14.47□□□□□ -0.09
VMP1-211ENST00000591315 VPS33BQ9H267 617 aa14.47□□□□□ -0.09
VMP1-211ENST00000591315 RCAN3Q9UKA8 241 aa14.47□□□□□ -0.09
VMP1-211ENST00000591315 SHTN1A0MZ66 631 aa14.46□□□□□ -0.09
VMP1-211ENST00000591315 DZIP1LQ8IYY4 767 aaKnown RBP14.46□□□□□ -0.09
VMP1-211ENST00000591315 GPC2Q8N158 579 aa14.46□□□□□ -0.09
VMP1-211ENST00000591315 L3MBTL3Q96JM7 780 aaPredicted RBP14.46□□□□□ -0.09
VMP1-211ENST00000591315 EYA3Q99504 573 aa14.46□□□□□ -0.09
VMP1-211ENST00000591315 CNNM1Q9NRU3 951 aa14.46□□□□□ -0.09
VMP1-211ENST00000591315 ZNF804BA4D1E1 1349 aa14.45□□□□□ -0.1
VMP1-211ENST00000591315 EPS15P42566 896 aa14.45□□□□□ -0.1
VMP1-211ENST00000591315 GMPSP49915 693 aaPredicted RBP14.45□□□□□ -0.1
VMP1-211ENST00000591315 SCNN1DP51172 638 aa14.45□□□□□ -0.1
VMP1-211ENST00000591315 CIAPIN1Q6FI81 312 aa14.45□□□□□ -0.1
VMP1-211ENST00000591315 ANKRD2Q9GZV1 360 aa14.45□□□□□ -0.1
VMP1-211ENST00000591315 TAF1DQ9H5J8 278 aaPredicted RBP14.45□□□□□ -0.1
VMP1-211ENST00000591315 ZBTB12Q9Y330 459 aaPredicted RBP14.45□□□□□ -0.1
VMP1-211ENST00000591315 RIPOR2Q9Y4F9 1068 aa14.45□□□□□ -0.1
VMP1-211ENST00000591315 CEP350Q5VT06 3117 aa14.45□□□□□ -0.1
VMP1-211ENST00000591315 IRS2Q9Y4H2 1338 aa14.44□□□□□ -0.1
VMP1-211ENST00000591315 PSMD14O00487 310 aa14.44□□□□□ -0.1
VMP1-211ENST00000591315 PTPN12Q05209 780 aaKnown RBP14.44□□□□□ -0.1
VMP1-211ENST00000591315 C1orf115Q9H7X2 142 aa14.44□□□□□ -0.1
VMP1-211ENST00000591315 PA2G4Q9UQ80 394 aaKnown RBP14.44□□□□□ -0.1
VMP1-211ENST00000591315 LEMD3Q9Y2U8 911 aa14.44□□□□□ -0.1
VMP1-211ENST00000591315 TOMM70O94826 608 aa14.43□□□□□ -0.1
VMP1-211ENST00000591315 KCNJ4P48050 445 aa14.43□□□□□ -0.1
VMP1-211ENST00000591315 C20orf194Q5TEA3 1177 aa14.43□□□□□ -0.1
VMP1-211ENST00000591315 ITPRIPQ8IWB1 547 aa14.43□□□□□ -0.1
VMP1-211ENST00000591315 FTSJ3Q8IY81 847 aaKnown RBP14.43□□□□□ -0.1
VMP1-211ENST00000591315 C16orf71Q8IYS4 520 aaPredicted RBP14.43□□□□□ -0.1
VMP1-211ENST00000591315 MXD3Q9BW11 206 aa14.43□□□□□ -0.1
VMP1-211ENST00000591315 SIL1Q9H173 461 aa14.43□□□□□ -0.1
VMP1-211ENST00000591315 HACL1Q9UJ83 578 aa14.43□□□□□ -0.1
VMP1-211ENST00000591315 MED23Q9ULK4 1368 aa14.43□□□□□ -0.1
VMP1-211ENST00000591315 SCN4AP35499 1836 aa14.43□□□□□ -0.1
VMP1-211ENST00000591315 G3V3G9 751 aa14.42□□□□□ -0.1
VMP1-211ENST00000591315 GNAI3P08754 354 aa14.42□□□□□ -0.1
VMP1-211ENST00000591315 EPHX2P34913 555 aa14.42□□□□□ -0.1
VMP1-211ENST00000591315 DCAF8Q5TAQ9 597 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms