RNA–Protein interactions for RNA: ENST00000591303.2

PCSK4-211, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-211ENST00000591303 TMC4Q7Z404 712 aa25.58■■□□□ 1.69
PCSK4-211ENST00000591303 CELF1Q92879 486 aaKnown RBP25.58■■□□□ 1.69
PCSK4-211ENST00000591303 R3HDMLQ9H3Y0 253 aa25.58■■□□□ 1.69
PCSK4-211ENST00000591303 PSME4Q14997 1843 aa25.58■■□□□ 1.68
PCSK4-211ENST00000591303 RBBP6Q7Z6E9 1792 aaKnown RBP25.57■■□□□ 1.68
PCSK4-211ENST00000591303 FKBP1BP68106 108 aa25.57■■□□□ 1.68
PCSK4-211ENST00000591303 ZNF428Q96B54 188 aa25.57■■□□□ 1.68
PCSK4-211ENST00000591303 SCAF8Q9UPN6 1271 aaKnown RBP25.57■■□□□ 1.68
PCSK4-211ENST00000591303 POTEFA5A3E0 1075 aa25.56■■□□□ 1.68
PCSK4-211ENST00000591303 TM4SF4P48230 202 aa25.56■■□□□ 1.68
PCSK4-211ENST00000591303 SCARF1Q14162 830 aa25.56■■□□□ 1.68
PCSK4-211ENST00000591303 TRMT112Q9UI30 125 aaKnown RBP25.56■■□□□ 1.68
PCSK4-211ENST00000591303 SH3TC1Q8TE82 1336 aa25.56■■□□□ 1.68
PCSK4-211ENST00000591303 UBE2Q2LH0YL09 131 aa25.55■■□□□ 1.68
PCSK4-211ENST00000591303 C6orf229H3BNL8 230 aa25.55■■□□□ 1.68
PCSK4-211ENST00000591303 ZNF280AP59817 542 aaPredicted RBP25.55■■□□□ 1.68
PCSK4-211ENST00000591303 ZNF609O15014 1411 aa25.54■■□□□ 1.68
PCSK4-211ENST00000591303 TBC1D16Q8TBP0 767 aa25.53■■□□□ 1.68
PCSK4-211ENST00000591303 FKTNO75072 461 aa25.51■■□□□ 1.67
PCSK4-211ENST00000591303 EIF2S2P20042 333 aaKnown RBP25.51■■□□□ 1.67
PCSK4-211ENST00000591303 TCIRG1Q13488 830 aa25.51■■□□□ 1.67
PCSK4-211ENST00000591303 PRAMEF18Q5VWM3 479 aa25.51■■□□□ 1.67
PCSK4-211ENST00000591303 COPS6Q7L5N1 327 aa25.51■■□□□ 1.67
PCSK4-211ENST00000591303 CFHR5Q9BXR6 569 aa25.51■■□□□ 1.67
PCSK4-211ENST00000591303 PPP2R1AP30153 589 aa25.5■■□□□ 1.67
PCSK4-211ENST00000591303 MKRN3Q13064 507 aaKnown RBP25.5■■□□□ 1.67
PCSK4-211ENST00000591303 HSP90AB3PQ58FF7 597 aa25.5■■□□□ 1.67
PCSK4-211ENST00000591303 KIAA0100Q14667 2235 aaKnown RBP25.49■■□□□ 1.67
PCSK4-211ENST00000591303 PITPNM2Q9BZ72 1349 aa25.49■■□□□ 1.67
PCSK4-211ENST00000591303 EYA3Q99504 573 aa25.49■■□□□ 1.67
PCSK4-211ENST00000591303 TRIM26Q12899 539 aaPredicted RBP25.48■■□□□ 1.67
PCSK4-211ENST00000591303 AIMP1Q12904 312 aaKnown RBP25.48■■□□□ 1.67
PCSK4-211ENST00000591303 SF3B3Q15393 1217 aaKnown RBP25.48■■□□□ 1.67
PCSK4-211ENST00000591303 XAGE3Q8WTP9 111 aa25.48■■□□□ 1.67
PCSK4-211ENST00000591303 GMLQ99445 158 aa25.48■■□□□ 1.67
PCSK4-211ENST00000591303 RSBN1LQ6PCB5 846 aaPredicted RBP25.47■■□□□ 1.67
PCSK4-211ENST00000591303 PCGF6Q9BYE7 350 aa25.47■■□□□ 1.67
PCSK4-211ENST00000591303 ZNF646O15015 1829 aaPredicted RBP25.47■■□□□ 1.67
PCSK4-211ENST00000591303 AGBL3Q8NEM8 1001 aa25.46■■□□□ 1.67
PCSK4-211ENST00000591303 PLEKHF1Q96S99 279 aa25.46■■□□□ 1.67
PCSK4-211ENST00000591303 MYOZ2Q9NPC6 264 aa25.46■■□□□ 1.67
PCSK4-211ENST00000591303 ZC3H12CQ9C0D7 883 aaKnown RBP25.45■■□□□ 1.66
PCSK4-211ENST00000591303 FAM89AQ96GI7 184 aa25.44■■□□□ 1.66
PCSK4-211ENST00000591303 PODXL2Q9NZ53 605 aa25.44■■□□□ 1.66
PCSK4-211ENST00000591303 NFE2L2Q16236 605 aa25.43■■□□□ 1.66
PCSK4-211ENST00000591303 OTOP1Q7RTM1 612 aa25.43■■□□□ 1.66
PCSK4-211ENST00000591303 NECTIN2Q92692 538 aa25.43■■□□□ 1.66
PCSK4-211ENST00000591303 SREBF2Q12772 1141 aa25.42■■□□□ 1.66
PCSK4-211ENST00000591303 NBPF9Q3BBW0 867 aa25.42■■□□□ 1.66
PCSK4-211ENST00000591303 INTS3Q68E01 1043 aaKnown RBP25.42■■□□□ 1.66
PCSK4-211ENST00000591303 TSPYL4Q9UJ04 414 aa25.42■■□□□ 1.66
PCSK4-211ENST00000591303 COLQQ9Y215 455 aaPredicted RBP25.42■■□□□ 1.66
PCSK4-211ENST00000591303 TRIM17Q9Y577 477 aa25.42■■□□□ 1.66
PCSK4-211ENST00000591303 LAMB1P07942 1786 aa25.41■■□□□ 1.66
PCSK4-211ENST00000591303 USP17L8P0C7I0 530 aa25.41■■□□□ 1.66
PCSK4-211ENST00000591303 EN2P19622 333 aaPredicted RBP25.41■■□□□ 1.66
PCSK4-211ENST00000591303 PTPN12Q05209 780 aaKnown RBP25.41■■□□□ 1.66
PCSK4-211ENST00000591303 UFL1O94874 794 aa25.4■■□□□ 1.66
PCSK4-211ENST00000591303 RPS8P62241 208 aaKnown RBP25.4■■□□□ 1.66
PCSK4-211ENST00000591303 TTLL12Q14166 644 aaPredicted RBP25.4■■□□□ 1.66
PCSK4-211ENST00000591303 TRIOBPQ9H2D6 2365 aa25.4■■□□□ 1.66
PCSK4-211ENST00000591303 RANBP2P49792 3224 aaKnown RBP25.4■■□□□ 1.66
PCSK4-211ENST00000591303 ISCA1Q9BUE6 129 aa25.39■■□□□ 1.66
PCSK4-211ENST00000591303 CEP290O15078 2479 aa25.39■■□□□ 1.65
PCSK4-211ENST00000591303 RTL5Q5HYW3 569 aaPredicted RBP25.38■■□□□ 1.65
PCSK4-211ENST00000591303 SPRYD7Q5W111 196 aa25.37■■□□□ 1.65
PCSK4-211ENST00000591303 SEC31BQ9NQW1 1179 aa25.37■■□□□ 1.65
PCSK4-211ENST00000591303 ATP5J2-PTCD1G3V325 749 aa25.36■■□□□ 1.65
PCSK4-211ENST00000591303 G3V3G9 751 aa25.36■■□□□ 1.65
PCSK4-211ENST00000591303 CAP1Q01518 475 aa25.36■■□□□ 1.65
PCSK4-211ENST00000591303 DCAF8Q5TAQ9 597 aa25.36■■□□□ 1.65
PCSK4-211ENST00000591303 LDLRAD1Q5T700 205 aa25.35■■□□□ 1.65
PCSK4-211ENST00000591303 ARMC5Q96C12 935 aa25.35■■□□□ 1.65
PCSK4-211ENST00000591303 GGA1Q9UJY5 639 aa25.35■■□□□ 1.65
PCSK4-211ENST00000591303 PTPN22Q9Y2R2 807 aa25.35■■□□□ 1.65
PCSK4-211ENST00000591303 COL6A3P12111 3177 aa25.35■■□□□ 1.65
PCSK4-211ENST00000591303 A0A0C4DFX4 3053 aa25.34■■□□□ 1.65
PCSK4-211ENST00000591303 PRKG1Q13976 671 aa25.34■■□□□ 1.65
PCSK4-211ENST00000591303 MXD3Q9BW11 206 aa25.34■■□□□ 1.65
PCSK4-211ENST00000591303 ANKIB1Q9P2G1 1089 aa25.34■■□□□ 1.65
PCSK4-211ENST00000591303 FZD1Q9UP38 647 aa25.34■■□□□ 1.65
PCSK4-211ENST00000591303 USP17L3A6NCW0 530 aa25.33■■□□□ 1.65
PCSK4-211ENST00000591303 USP17L4A6NCW7 530 aa25.33■■□□□ 1.65
PCSK4-211ENST00000591303 WTIPA6NIX2 430 aaPredicted RBP25.33■■□□□ 1.65
PCSK4-211ENST00000591303 WNT10BO00744 389 aa25.33■■□□□ 1.65
PCSK4-211ENST00000591303 IRS4O14654 1257 aaPredicted RBP25.33■■□□□ 1.65
PCSK4-211ENST00000591303 NEFMP07197 916 aa25.33■■□□□ 1.65
PCSK4-211ENST00000591303 KRT24Q2M2I5 525 aa25.33■■□□□ 1.65
PCSK4-211ENST00000591303 USP17L1Q7RTZ2 530 aa25.33■■□□□ 1.65
PCSK4-211ENST00000591303 IFNL1Q8IU54 200 aa25.33■■□□□ 1.65
PCSK4-211ENST00000591303 IGF2BP3O00425 579 aaKnown RBP eCLIP25.32■■□□□ 1.64
PCSK4-211ENST00000591303 ALDH1A1P00352 501 aa25.32■■□□□ 1.64
PCSK4-211ENST00000591303 PLBD2Q8NHP8 589 aa25.32■■□□□ 1.64
PCSK4-211ENST00000591303 CD99L2Q8TCZ2 262 aa25.31■■□□□ 1.64
PCSK4-211ENST00000591303 CHPF2Q9P2E5 772 aa25.31■■□□□ 1.64
PCSK4-211ENST00000591303 NF2P35240 595 aa25.3■■□□□ 1.64
PCSK4-211ENST00000591303 OTUD5Q96G74 571 aa25.3■■□□□ 1.64
PCSK4-211ENST00000591303 SASH1O94885 1247 aa25.29■■□□□ 1.64
PCSK4-211ENST00000591303 DACT2Q5SW24 774 aa25.29■■□□□ 1.64
PCSK4-211ENST00000591303 ANKRD13DQ6ZTN6 518 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms