RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 CCDC136Q96JN2 1154 aa11.09□□□□□ -0.63
NPC1-211ENST00000591075 RWDD1Q9H446 243 aaPredicted RBP11.09□□□□□ -0.63
NPC1-211ENST00000591075 SLX4Q8IY92 1834 aa11.09□□□□□ -0.63
NPC1-211ENST00000591075 RIC1Q4ADV7 1423 aa11.09□□□□□ -0.63
NPC1-211ENST00000591075 IARSP41252 1262 aaKnown RBP11.08□□□□□ -0.64
NPC1-211ENST00000591075 EIF6P56537 245 aaKnown RBP11.08□□□□□ -0.64
NPC1-211ENST00000591075 BEND3Q5T5X7 828 aa11.08□□□□□ -0.64
NPC1-211ENST00000591075 SLC4A10Q6U841 1118 aa11.08□□□□□ -0.64
NPC1-211ENST00000591075 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
NPC1-211ENST00000591075 TMC4Q7Z404 712 aa11.08□□□□□ -0.64
NPC1-211ENST00000591075 LARGE2Q8N3Y3 721 aa11.08□□□□□ -0.64
NPC1-211ENST00000591075 ZBTB38Q8NAP3 1195 aaPredicted RBP11.08□□□□□ -0.64
NPC1-211ENST00000591075 PSMD1Q99460 953 aa11.08□□□□□ -0.64
NPC1-211ENST00000591075 ATP6V0A2Q9Y487 856 aa11.08□□□□□ -0.64
NPC1-211ENST00000591075 COL11A2P13942 1736 aaPredicted RBP11.08□□□□□ -0.64
NPC1-211ENST00000591075 PRELPP51888 382 aa11.07□□□□□ -0.64
NPC1-211ENST00000591075 GRAPQ13588 217 aa11.07□□□□□ -0.64
NPC1-211ENST00000591075 DPP8Q6V1X1 898 aaPredicted RBP11.07□□□□□ -0.64
NPC1-211ENST00000591075 RBM46Q8TBY0 533 aaKnown RBP11.07□□□□□ -0.64
NPC1-211ENST00000591075 GRAPLQ8TC17 118 aaPredicted RBP11.07□□□□□ -0.64
NPC1-211ENST00000591075 IQCA1LA6NCM1 817 aa11.06□□□□□ -0.64
NPC1-211ENST00000591075 PPIP5K2O43314 1243 aa11.06□□□□□ -0.64
NPC1-211ENST00000591075 HMMRO75330 724 aa11.06□□□□□ -0.64
NPC1-211ENST00000591075 GNAI2P04899 355 aa11.06□□□□□ -0.64
NPC1-211ENST00000591075 PCCAP05165 728 aaPredicted RBP11.06□□□□□ -0.64
NPC1-211ENST00000591075 IRX6P78412 446 aaPredicted RBP11.06□□□□□ -0.64
NPC1-211ENST00000591075 HDAC1Q13547 482 aaPredicted RBP11.06□□□□□ -0.64
NPC1-211ENST00000591075 CCDC152Q4G0S7 254 aa11.06□□□□□ -0.64
NPC1-211ENST00000591075 SP8Q8IXZ3 490 aa11.06□□□□□ -0.64
NPC1-211ENST00000591075 NIM1KQ8IY84 436 aa11.06□□□□□ -0.64
NPC1-211ENST00000591075 MPNDQ8N594 471 aa11.06□□□□□ -0.64
NPC1-211ENST00000591075 C9orf78Q9NZ63 289 aaPredicted RBP11.06□□□□□ -0.64
NPC1-211ENST00000591075 CACNA1SQ13698 1873 aa11.06□□□□□ -0.64
NPC1-211ENST00000591075 UTYO14607 1347 aa11.06□□□□□ -0.64
NPC1-211ENST00000591075 F6X3S4 739 aa11.05□□□□□ -0.64
NPC1-211ENST00000591075 PDE8AO60658 829 aa11.05□□□□□ -0.64
NPC1-211ENST00000591075 DDNO94850 711 aaPredicted RBP11.05□□□□□ -0.64
NPC1-211ENST00000591075 SBF1O95248 1867 aa11.05□□□□□ -0.64
NPC1-211ENST00000591075 UBTFL1P0CB47 393 aaPredicted RBP11.05□□□□□ -0.64
NPC1-211ENST00000591075 HSPA6P17066 643 aa11.05□□□□□ -0.64
NPC1-211ENST00000591075 FSTL1Q12841 308 aa11.05□□□□□ -0.64
NPC1-211ENST00000591075 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
NPC1-211ENST00000591075 SF3B3Q15393 1217 aaKnown RBP11.05□□□□□ -0.64
NPC1-211ENST00000591075 CENPQQ7L2Z9 268 aaPredicted RBP11.05□□□□□ -0.64
NPC1-211ENST00000591075 SMC1BQ8NDV3 1235 aa11.05□□□□□ -0.64
NPC1-211ENST00000591075 GJA3Q9Y6H8 435 aa11.05□□□□□ -0.64
NPC1-211ENST00000591075 G3V3G9 751 aa11.04□□□□□ -0.64
NPC1-211ENST00000591075 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
NPC1-211ENST00000591075 RPS8P62241 208 aaKnown RBP11.04□□□□□ -0.64
NPC1-211ENST00000591075 DCAF8Q5TAQ9 597 aa11.04□□□□□ -0.64
NPC1-211ENST00000591075 JARID2Q92833 1246 aaPredicted RBP11.04□□□□□ -0.64
NPC1-211ENST00000591075 CCDC85AQ96PX6 553 aaPredicted RBP11.04□□□□□ -0.64
NPC1-211ENST00000591075 USP44Q9H0E7 712 aa11.04□□□□□ -0.64
NPC1-211ENST00000591075 VPS33BQ9H267 617 aa11.04□□□□□ -0.64
NPC1-211ENST00000591075 TNRC6CQ9HCJ0 1690 aaKnown RBP11.04□□□□□ -0.64
NPC1-211ENST00000591075 ANKRD36CQ5JPF3 1778 aa11.03□□□□□ -0.64
NPC1-211ENST00000591075 NEURL1BA8MQ27 555 aa11.03□□□□□ -0.64
NPC1-211ENST00000591075 C6orf229H3BNL8 230 aa11.03□□□□□ -0.64
NPC1-211ENST00000591075 GRM8O00222 908 aa11.03□□□□□ -0.64
NPC1-211ENST00000591075 APLP1P51693 650 aa11.03□□□□□ -0.64
NPC1-211ENST00000591075 GCKRQ14397 625 aa11.03□□□□□ -0.64
NPC1-211ENST00000591075 GCC1Q96CN9 775 aa11.03□□□□□ -0.64
NPC1-211ENST00000591075 CDC5LQ99459 802 aaKnown RBP11.03□□□□□ -0.64
NPC1-211ENST00000591075 ANKIB1Q9P2G1 1089 aa11.03□□□□□ -0.64
NPC1-211ENST00000591075 NSFL1CQ9UNZ2 370 aaKnown RBP11.03□□□□□ -0.64
NPC1-211ENST00000591075 FER1L6Q2WGJ9 1857 aa11.03□□□□□ -0.64
NPC1-211ENST00000591075 CCDC88AQ3V6T2 1871 aa11.03□□□□□ -0.64
NPC1-211ENST00000591075 ARFGEF2Q9Y6D5 1785 aa11.03□□□□□ -0.64
NPC1-211ENST00000591075 AOC3Q16853 763 aa11.02□□□□□ -0.65
NPC1-211ENST00000591075 CWF19L2Q2TBE0 894 aaKnown RBP11.02□□□□□ -0.65
NPC1-211ENST00000591075 EAPPQ56P03 285 aaPredicted RBP11.02□□□□□ -0.65
NPC1-211ENST00000591075 UBE3BQ7Z3V4 1068 aa11.02□□□□□ -0.65
NPC1-211ENST00000591075 ANKRD18AQ8IVF6 992 aa11.02□□□□□ -0.65
NPC1-211ENST00000591075 CELF1Q92879 486 aaKnown RBP11.02□□□□□ -0.65
NPC1-211ENST00000591075 EYA3Q99504 573 aa11.02□□□□□ -0.65
NPC1-211ENST00000591075 HACL1Q9UJ83 578 aa11.02□□□□□ -0.65
NPC1-211ENST00000591075 TNNQ9UQP3 1299 aa11.02□□□□□ -0.65
NPC1-211ENST00000591075 H7C1W4 665 aa11.01□□□□□ -0.65
NPC1-211ENST00000591075 FZD9O00144 591 aa11.01□□□□□ -0.65
NPC1-211ENST00000591075 IGKV5-2P06315 115 aa11.01□□□□□ -0.65
NPC1-211ENST00000591075 CTSWP56202 376 aa11.01□□□□□ -0.65
NPC1-211ENST00000591075 ATP8B2P98198 1209 aa11.01□□□□□ -0.65
NPC1-211ENST00000591075 HSP90AB4PQ58FF6 505 aa11.01□□□□□ -0.65
NPC1-211ENST00000591075 GPC2Q8N158 579 aa11.01□□□□□ -0.65
NPC1-211ENST00000591075 ANKRD44Q8N8A2 993 aa11.01□□□□□ -0.65
NPC1-211ENST00000591075 CDHR2Q9BYE9 1310 aa11.01□□□□□ -0.65
NPC1-211ENST00000591075 ZNF541Q9H0D2 1346 aa11.01□□□□□ -0.65
NPC1-211ENST00000591075 IGHMBP2P38935 993 aaKnown RBP11□□□□□ -0.65
NPC1-211ENST00000591075 MTX1Q13505 466 aa11□□□□□ -0.65
NPC1-211ENST00000591075 TNIP1Q15025 636 aa11□□□□□ -0.65
NPC1-211ENST00000591075 WASHC4Q2M389 1173 aa11□□□□□ -0.65
NPC1-211ENST00000591075 PNMA8AQ86V59 439 aaPredicted RBP11□□□□□ -0.65
NPC1-211ENST00000591075 MEIS3Q99687 375 aa11□□□□□ -0.65
NPC1-211ENST00000591075 RTFDC1Q9BY42 306 aaPredicted RBP11□□□□□ -0.65
NPC1-211ENST00000591075 ZC3H12CQ9C0D7 883 aaKnown RBP11□□□□□ -0.65
NPC1-211ENST00000591075 SEC31BQ9NQW1 1179 aa11□□□□□ -0.65
NPC1-211ENST00000591075 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
NPC1-211ENST00000591075 GGA1Q9UJY5 639 aa11□□□□□ -0.65
NPC1-211ENST00000591075 ZNRF3Q9ULT6 936 aa11□□□□□ -0.65
NPC1-211ENST00000591075 CHMP3Q9Y3E7 222 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms