RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 NEURL1BA8MQ27 555 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 H7C1D1 291 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 HSPA1AP0DMV8 641 aaKnown RBP9.71□□□□□ -0.86
NPC1-208ENST00000590301 HSPA1BP0DMV9 641 aaKnown RBP9.71□□□□□ -0.86
NPC1-208ENST00000590301 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
NPC1-208ENST00000590301 FLIIQ13045 1269 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 POLA2Q14181 598 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 ANKRD18AQ8IVF6 992 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 LINS1Q8NG48 757 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 ZNF428Q96B54 188 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 SEC31BQ9NQW1 1179 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 ANKIB1Q9P2G1 1089 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 POLLQ9UGP5 575 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 GGA1Q9UJY5 639 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 XDHP47989 1333 aa9.71□□□□□ -0.86
NPC1-208ENST00000590301 ANKRD36CQ5JPF3 1778 aa9.7□□□□□ -0.86
NPC1-208ENST00000590301 YDJCA8MPS7 323 aa9.7□□□□□ -0.86
NPC1-208ENST00000590301 G3V3G9 751 aa9.7□□□□□ -0.86
NPC1-208ENST00000590301 H7C1W4 665 aa9.7□□□□□ -0.86
NPC1-208ENST00000590301 VAMP4O75379 141 aa9.7□□□□□ -0.86
NPC1-208ENST00000590301 UFL1O94874 794 aa9.7□□□□□ -0.86
NPC1-208ENST00000590301 FKBP5Q13451 457 aaPredicted RBP9.7□□□□□ -0.86
NPC1-208ENST00000590301 DEFB115Q30KQ5 88 aa9.7□□□□□ -0.86
NPC1-208ENST00000590301 DCAF8Q5TAQ9 597 aa9.7□□□□□ -0.86
NPC1-208ENST00000590301 TTLL11Q8NHH1 800 aa9.7□□□□□ -0.86
NPC1-208ENST00000590301 BSDC1Q9NW68 430 aaPredicted RBP9.7□□□□□ -0.86
NPC1-208ENST00000590301 CNOT7Q9UIV1 285 aaKnown RBP9.7□□□□□ -0.86
NPC1-208ENST00000590301 DUOX1Q9NRD9 1551 aa9.7□□□□□ -0.86
NPC1-208ENST00000590301 ADAMTSL1Q8N6G6 1762 aa9.7□□□□□ -0.86
NPC1-208ENST00000590301 ECE2O60344 883 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 ATP2B4P23634 1241 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 ECE1P42892 770 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 VEGFBP49765 207 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 GCKRQ14397 625 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 CWF19L2Q2TBE0 894 aaKnown RBP9.69□□□□□ -0.86
NPC1-208ENST00000590301 CDC37L1Q7L3B6 337 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 G2E3Q7L622 706 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 UBE3BQ7Z3V4 1068 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 MICALL2Q8IY33 904 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 DNAAF4Q8WXU2 420 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 AIDAQ96BJ3 306 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 PLA2G12BQ9BX93 195 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 DBNDD1Q9H9R9 158 aa9.69□□□□□ -0.86
NPC1-208ENST00000590301 ABT1Q9ULW3 272 aaKnown RBP9.69□□□□□ -0.86
NPC1-208ENST00000590301 LRRC37AA6NMS7 1700 aa9.68□□□□□ -0.86
NPC1-208ENST00000590301 ZNF609O15014 1411 aa9.68□□□□□ -0.86
NPC1-208ENST00000590301 PSMD14O00487 310 aa9.68□□□□□ -0.86
NPC1-208ENST00000590301 RIMBP2O15034 1052 aa9.68□□□□□ -0.86
NPC1-208ENST00000590301 VIL1P09327 827 aaKnown RBP9.68□□□□□ -0.86
NPC1-208ENST00000590301 IGHMBP2P38935 993 aaKnown RBP9.68□□□□□ -0.86
NPC1-208ENST00000590301 MAP2K1Q02750 393 aaPredicted RBP9.68□□□□□ -0.86
NPC1-208ENST00000590301 EXOSC9Q06265 439 aaKnown RBP9.68□□□□□ -0.86
NPC1-208ENST00000590301 PODNQ7Z5L7 613 aa9.68□□□□□ -0.86
NPC1-208ENST00000590301 HHIPL1Q96JK4 782 aa9.68□□□□□ -0.86
NPC1-208ENST00000590301 CACNA1SQ13698 1873 aa9.68□□□□□ -0.86
NPC1-208ENST00000590301 MMP14P50281 582 aa9.67□□□□□ -0.86
NPC1-208ENST00000590301 DOK7Q18PE1 504 aa9.67□□□□□ -0.86
NPC1-208ENST00000590301 COL13A1Q5TAT6 717 aaPredicted RBP9.67□□□□□ -0.86
NPC1-208ENST00000590301 FAM9BQ8IZU0 186 aa9.67□□□□□ -0.86
NPC1-208ENST00000590301 AGBL3Q8NEM8 1001 aa9.67□□□□□ -0.86
NPC1-208ENST00000590301 TRPM4Q8TD43 1214 aa9.67□□□□□ -0.86
NPC1-208ENST00000590301 JARID2Q92833 1246 aaPredicted RBP9.67□□□□□ -0.86
NPC1-208ENST00000590301 CCDC85AQ96PX6 553 aaPredicted RBP9.67□□□□□ -0.86
NPC1-208ENST00000590301 ANKRD2Q9GZV1 360 aa9.67□□□□□ -0.86
NPC1-208ENST00000590301 GREM2Q9H772 168 aa9.67□□□□□ -0.86
NPC1-208ENST00000590301 MINPP1Q9UNW1 487 aa9.67□□□□□ -0.86
NPC1-208ENST00000590301 LEMD3Q9Y2U8 911 aa9.67□□□□□ -0.86
NPC1-208ENST00000590301 ZBTB12Q9Y330 459 aaPredicted RBP9.67□□□□□ -0.86
NPC1-208ENST00000590301 SALL2Q9Y467 1007 aaPredicted RBP9.67□□□□□ -0.86
NPC1-208ENST00000590301 TLL2Q9Y6L7 1015 aa9.67□□□□□ -0.86
NPC1-208ENST00000590301 MED23Q9ULK4 1368 aa9.66□□□□□ -0.86
NPC1-208ENST00000590301 WDR33Q9C0J8 1336 aaKnown RBP9.66□□□□□ -0.86
NPC1-208ENST00000590301 LTBP1Q14766 1721 aa9.66□□□□□ -0.86
NPC1-208ENST00000590301 TRAF5O00463 557 aa9.66□□□□□ -0.86
NPC1-208ENST00000590301 CSF1RP07333 972 aa9.66□□□□□ -0.86
NPC1-208ENST00000590301 CTCFP49711 727 aaPredicted RBP9.66□□□□□ -0.86
NPC1-208ENST00000590301 HIRAP54198 1017 aaPredicted RBP9.66□□□□□ -0.86
NPC1-208ENST00000590301 CASP7P55210 303 aa9.66□□□□□ -0.86
NPC1-208ENST00000590301 CST9Q5W186 159 aa9.66□□□□□ -0.86
NPC1-208ENST00000590301 RSBN1LQ6PCB5 846 aaPredicted RBP9.66□□□□□ -0.86
NPC1-208ENST00000590301 TNS4Q8IZW8 715 aa9.66□□□□□ -0.86
NPC1-208ENST00000590301 PRDM10Q9NQV6 1147 aa9.66□□□□□ -0.86
NPC1-208ENST00000590301 WBP1LQ9NX94 342 aa9.66□□□□□ -0.86
NPC1-208ENST00000590301 CCDC88AQ3V6T2 1871 aa9.66□□□□□ -0.86
NPC1-208ENST00000590301 DDX60Q8IY21 1712 aaKnown RBP9.65□□□□□ -0.86
NPC1-208ENST00000590301 ZNF521Q96K83 1311 aa9.65□□□□□ -0.86
NPC1-208ENST00000590301 USP17L3A6NCW0 530 aa9.65□□□□□ -0.86
NPC1-208ENST00000590301 USP17L4A6NCW7 530 aa9.65□□□□□ -0.86
NPC1-208ENST00000590301 CELF2O95319 508 aaKnown RBP9.65□□□□□ -0.86
NPC1-208ENST00000590301 ITGA6P23229 1130 aa9.65□□□□□ -0.86
NPC1-208ENST00000590301 MAP2K2P36507 400 aa9.65□□□□□ -0.86
NPC1-208ENST00000590301 CCT4P50991 539 aaKnown RBP9.65□□□□□ -0.86
NPC1-208ENST00000590301 ZNF280AP59817 542 aaPredicted RBP9.65□□□□□ -0.86
NPC1-208ENST00000590301 TBC1D10BQ4KMP7 808 aaPredicted RBP9.65□□□□□ -0.86
NPC1-208ENST00000590301 BEND3Q5T5X7 828 aa9.65□□□□□ -0.86
NPC1-208ENST00000590301 USP17L1Q7RTZ2 530 aa9.65□□□□□ -0.86
NPC1-208ENST00000590301 SAPCD2Q86UD0 394 aa9.65□□□□□ -0.86
NPC1-208ENST00000590301 DCPSQ96C86 337 aaKnown RBP9.65□□□□□ -0.86
NPC1-208ENST00000590301 CAPNS2Q96L46 248 aa9.65□□□□□ -0.86
NPC1-208ENST00000590301 GPR101Q96P66 508 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms