RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 TAF1P21675 1872 aa17.68■□□□□ 0.42
SCAMP4-212ENST00000590266 CCT4P50991 539 aaKnown RBP17.68■□□□□ 0.42
SCAMP4-212ENST00000590266 CCDC57Q2TAC2 916 aa17.68■□□□□ 0.42
SCAMP4-212ENST00000590266 DCAF8Q5TAQ9 597 aa17.68■□□□□ 0.42
SCAMP4-212ENST00000590266 VPS33BQ9H267 617 aa17.68■□□□□ 0.42
SCAMP4-212ENST00000590266 BICC1Q9H694 974 aaKnown RBP17.68■□□□□ 0.42
SCAMP4-212ENST00000590266 MINPP1Q9UNW1 487 aa17.68■□□□□ 0.42
SCAMP4-212ENST00000590266 XDHP47989 1333 aa17.68■□□□□ 0.42
SCAMP4-212ENST00000590266 DUOX1Q9NRD9 1551 aa17.67■□□□□ 0.42
SCAMP4-212ENST00000590266 BRPF1P55201 1214 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-212ENST00000590266 DOK7Q18PE1 504 aa17.67■□□□□ 0.42
SCAMP4-212ENST00000590266 CLUAP1Q96AJ1 413 aa17.67■□□□□ 0.42
SCAMP4-212ENST00000590266 ZNF594Q96JF6 807 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-212ENST00000590266 DBNDD1Q9H9R9 158 aa17.67■□□□□ 0.42
SCAMP4-212ENST00000590266 ZNRF3Q9ULT6 936 aa17.67■□□□□ 0.42
SCAMP4-212ENST00000590266 POTECB2RU33 542 aa17.66■□□□□ 0.42
SCAMP4-212ENST00000590266 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-212ENST00000590266 RAD17O75943 681 aa17.66■□□□□ 0.42
SCAMP4-212ENST00000590266 GPC2Q8N158 579 aa17.66■□□□□ 0.42
SCAMP4-212ENST00000590266 ZC3H12CQ9C0D7 883 aaKnown RBP17.66■□□□□ 0.42
SCAMP4-212ENST00000590266 USP44Q9H0E7 712 aa17.66■□□□□ 0.42
SCAMP4-212ENST00000590266 PODXL2Q9NZ53 605 aa17.66■□□□□ 0.42
SCAMP4-212ENST00000590266 TNNQ9UQP3 1299 aa17.66■□□□□ 0.42
SCAMP4-212ENST00000590266 UTYO14607 1347 aa17.66■□□□□ 0.42
SCAMP4-212ENST00000590266 LRRC37AA6NMS7 1700 aa17.65■□□□□ 0.42
SCAMP4-212ENST00000590266 WTIPA6NIX2 430 aaPredicted RBP17.65■□□□□ 0.42
SCAMP4-212ENST00000590266 KAZALD1Q96I82 304 aa17.65■□□□□ 0.42
SCAMP4-212ENST00000590266 CACNA1FO60840 1977 aa17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 IQCA1LA6NCM1 817 aa17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 ECE2O60344 883 aa17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 UBTFL1P0CB47 393 aaPredicted RBP17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 TRIM27P14373 513 aa17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 ATP2B4P23634 1241 aa17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 KCNJ4P48050 445 aa17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 CXCL9Q07325 125 aa17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 EAPPQ56P03 285 aaPredicted RBP17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 ATF7IPQ6VMQ6 1270 aa17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 HELBQ8NG08 1087 aaPredicted RBP17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 ARHGAP45Q92619 1136 aa17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 CNNM1Q9NRU3 951 aa17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 HACL1Q9UJ83 578 aa17.64■□□□□ 0.41
SCAMP4-212ENST00000590266 CCDC88AQ3V6T2 1871 aa17.63■□□□□ 0.41
SCAMP4-212ENST00000590266 YDJCA8MPS7 323 aa17.63■□□□□ 0.41
SCAMP4-212ENST00000590266 PLIN1O60240 522 aa17.63■□□□□ 0.41
SCAMP4-212ENST00000590266 LMOD1P29536 600 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-212ENST00000590266 CHRNDQ07001 517 aa17.63■□□□□ 0.41
SCAMP4-212ENST00000590266 CIAPIN1Q6FI81 312 aa17.63■□□□□ 0.41
SCAMP4-212ENST00000590266 LDHAL6AQ6ZMR3 332 aa17.63■□□□□ 0.41
SCAMP4-212ENST00000590266 L3MBTL3Q96JM7 780 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-212ENST00000590266 YTHDC1Q96MU7 727 aaKnown RBP17.63■□□□□ 0.41
SCAMP4-212ENST00000590266 TAF5LO75529 589 aa17.62■□□□□ 0.41
SCAMP4-212ENST00000590266 ZKSCAN2Q63HK3 967 aa17.62■□□□□ 0.41
SCAMP4-212ENST00000590266 ANKRD44Q8N8A2 993 aa17.62■□□□□ 0.41
SCAMP4-212ENST00000590266 ANKRD2Q9GZV1 360 aa17.62■□□□□ 0.41
SCAMP4-212ENST00000590266 POTEIP0CG38 1075 aa17.61■□□□□ 0.41
SCAMP4-212ENST00000590266 POTEJP0CG39 1038 aa17.61■□□□□ 0.41
SCAMP4-212ENST00000590266 EPHX2P34913 555 aa17.61■□□□□ 0.41
SCAMP4-212ENST00000590266 HTRA3P83110 453 aa17.61■□□□□ 0.41
SCAMP4-212ENST00000590266 TNIP1Q15025 636 aa17.61■□□□□ 0.41
SCAMP4-212ENST00000590266 MEIS3Q99687 375 aa17.61■□□□□ 0.41
SCAMP4-212ENST00000590266 TAF1DQ9H5J8 278 aaPredicted RBP17.61■□□□□ 0.41
SCAMP4-212ENST00000590266 KCNQ5Q9NR82 932 aa17.61■□□□□ 0.41
SCAMP4-212ENST00000590266 WDR90Q96KV7 1748 aa17.61■□□□□ 0.41
SCAMP4-212ENST00000590266 SNAP23O00161 211 aa17.6■□□□□ 0.41
SCAMP4-212ENST00000590266 GMPSP49915 693 aaPredicted RBP17.6■□□□□ 0.41
SCAMP4-212ENST00000590266 RABL6Q3YEC7 729 aaPredicted RBP17.6■□□□□ 0.41
SCAMP4-212ENST00000590266 INTS3Q68E01 1043 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-212ENST00000590266 FTSJ3Q8IY81 847 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-212ENST00000590266 PUS3Q9BZE2 481 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-212ENST00000590266 CLEC11AQ9Y240 323 aa17.6■□□□□ 0.41
SCAMP4-212ENST00000590266 LEMD3Q9Y2U8 911 aa17.6■□□□□ 0.41
SCAMP4-212ENST00000590266 LRRFIP2Q9Y608 721 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-212ENST00000590266 ZNF804BA4D1E1 1349 aa17.6■□□□□ 0.41
SCAMP4-212ENST00000590266 DICER1Q9UPY3 1922 aaKnown RBP17.6■□□□□ 0.41
SCAMP4-212ENST00000590266 PSMD14O00487 310 aa17.59■□□□□ 0.41
SCAMP4-212ENST00000590266 KLRK1P26718 216 aa17.59■□□□□ 0.41
SCAMP4-212ENST00000590266 EPS15P42566 896 aa17.59■□□□□ 0.41
SCAMP4-212ENST00000590266 SCNN1DP51172 638 aa17.59■□□□□ 0.41
SCAMP4-212ENST00000590266 DNAJC5GQ8N7S2 189 aa17.59■□□□□ 0.41
SCAMP4-212ENST00000590266 KLHDC4Q8TBB5 520 aa17.59■□□□□ 0.41
SCAMP4-212ENST00000590266 FBXW7Q969H0 707 aa17.59■□□□□ 0.41
SCAMP4-212ENST00000590266 ZBTB12Q9Y330 459 aaPredicted RBP17.59■□□□□ 0.41
SCAMP4-212ENST00000590266 MED23Q9ULK4 1368 aa17.58■□□□□ 0.4
SCAMP4-212ENST00000590266 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.4
SCAMP4-212ENST00000590266 KLRG1Q96E93 195 aa17.58■□□□□ 0.4
SCAMP4-212ENST00000590266 LTBP1Q14766 1721 aa17.58■□□□□ 0.4
SCAMP4-212ENST00000590266 MYH3P11055 1940 aa17.57■□□□□ 0.4
SCAMP4-212ENST00000590266 TXNRD3Q86VQ6 643 aa17.57■□□□□ 0.4
SCAMP4-212ENST00000590266 SPEF2Q9C093 1822 aa17.56■□□□□ 0.4
SCAMP4-212ENST00000590266 GNAI3P08754 354 aa17.56■□□□□ 0.4
SCAMP4-212ENST00000590266 LRRC24Q50LG9 513 aa17.56■□□□□ 0.4
SCAMP4-212ENST00000590266 PNMA8AQ86V59 439 aaPredicted RBP17.56■□□□□ 0.4
SCAMP4-212ENST00000590266 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
SCAMP4-212ENST00000590266 GPRC5DQ9NZD1 345 aa17.56■□□□□ 0.4
SCAMP4-212ENST00000590266 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
SCAMP4-212ENST00000590266 SHTN1A0MZ66 631 aa17.55■□□□□ 0.4
SCAMP4-212ENST00000590266 METTL24Q5JXM2 366 aa17.55■□□□□ 0.4
SCAMP4-212ENST00000590266 CHADLQ6NUI6 762 aa17.55■□□□□ 0.4
SCAMP4-212ENST00000590266 LDHDQ86WU2 507 aa17.55■□□□□ 0.4
SCAMP4-212ENST00000590266 DZIP1LQ8IYY4 767 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms