RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ZNRF3Q9ULT6 936 aa23.09■■□□□ 1.29
DDX39A-212ENST00000590260 RIMBP2O15034 1052 aa23.08■■□□□ 1.29
DDX39A-212ENST00000590260 SCNN1DP51172 638 aa23.08■■□□□ 1.29
DDX39A-212ENST00000590260 EIF6P56537 245 aaKnown RBP23.08■■□□□ 1.29
DDX39A-212ENST00000590260 WASHC4Q2M389 1173 aa23.08■■□□□ 1.29
DDX39A-212ENST00000590260 LMBR1LQ6UX01 489 aa23.08■■□□□ 1.29
DDX39A-212ENST00000590260 USP44Q9H0E7 712 aa23.08■■□□□ 1.29
DDX39A-212ENST00000590260 TNNQ9UQP3 1299 aa23.08■■□□□ 1.29
DDX39A-212ENST00000590260 SCN9AQ15858 1988 aa23.08■■□□□ 1.29
DDX39A-212ENST00000590260 C6orf229H3BNL8 230 aa23.07■■□□□ 1.28
DDX39A-212ENST00000590260 TAF1DQ9H5J8 278 aaPredicted RBP23.07■■□□□ 1.28
DDX39A-212ENST00000590260 KCNQ5Q9NR82 932 aa23.07■■□□□ 1.28
DDX39A-212ENST00000590260 GJA3Q9Y6H8 435 aa23.07■■□□□ 1.28
DDX39A-212ENST00000590260 BCAR3O75815 825 aa23.06■■□□□ 1.28
DDX39A-212ENST00000590260 UFL1O94874 794 aa23.06■■□□□ 1.28
DDX39A-212ENST00000590260 C16orf71Q8IYS4 520 aaPredicted RBP23.06■■□□□ 1.28
DDX39A-212ENST00000590260 ANKRD44Q8N8A2 993 aa23.06■■□□□ 1.28
DDX39A-212ENST00000590260 DBNDD1Q9H9R9 158 aa23.06■■□□□ 1.28
DDX39A-212ENST00000590260 XDHP47989 1333 aa23.06■■□□□ 1.28
DDX39A-212ENST00000590260 ZNF646O15015 1829 aaPredicted RBP23.05■■□□□ 1.28
DDX39A-212ENST00000590260 HSPA6P17066 643 aa23.05■■□□□ 1.28
DDX39A-212ENST00000590260 DOK7Q18PE1 504 aa23.05■■□□□ 1.28
DDX39A-212ENST00000590260 ZNF594Q96JF6 807 aaPredicted RBP23.05■■□□□ 1.28
DDX39A-212ENST00000590260 ANKIB1Q9P2G1 1089 aa23.05■■□□□ 1.28
DDX39A-212ENST00000590260 GGA1Q9UJY5 639 aa23.05■■□□□ 1.28
DDX39A-212ENST00000590260 RAD17O75943 681 aa23.04■■□□□ 1.28
DDX39A-212ENST00000590260 BICC1Q9H694 974 aaKnown RBP23.04■■□□□ 1.28
DDX39A-212ENST00000590260 ANKRD18BA2A2Z9 1011 aa23.03■■□□□ 1.28
DDX39A-212ENST00000590260 EPS15P42566 896 aa23.03■■□□□ 1.28
DDX39A-212ENST00000590260 FSTL1Q12841 308 aa23.03■■□□□ 1.28
DDX39A-212ENST00000590260 RABL6Q3YEC7 729 aaPredicted RBP23.03■■□□□ 1.28
DDX39A-212ENST00000590260 HACL1Q9UJ83 578 aa23.03■■□□□ 1.28
DDX39A-212ENST00000590260 IQCA1LA6NCM1 817 aa23.02■■□□□ 1.28
DDX39A-212ENST00000590260 ECE2O60344 883 aa23.02■■□□□ 1.28
DDX39A-212ENST00000590260 EPHX2P34913 555 aa23.02■■□□□ 1.28
DDX39A-212ENST00000590260 IGHMBP2P38935 993 aaKnown RBP23.02■■□□□ 1.28
DDX39A-212ENST00000590260 CCT4P50991 539 aaKnown RBP23.02■■□□□ 1.28
DDX39A-212ENST00000590260 CIAPIN1Q6FI81 312 aa23.02■■□□□ 1.28
DDX39A-212ENST00000590260 TXNRD3Q86VQ6 643 aa23.02■■□□□ 1.28
DDX39A-212ENST00000590260 CHMP3Q9Y3E7 222 aa23.02■■□□□ 1.28
DDX39A-212ENST00000590260 PSME4Q14997 1843 aa23.02■■□□□ 1.28
DDX39A-212ENST00000590260 IRS2Q9Y4H2 1338 aa23.02■■□□□ 1.28
DDX39A-212ENST00000590260 SNAP23O00161 211 aa23.01■■□□□ 1.27
DDX39A-212ENST00000590260 ATP2B4P23634 1241 aa23.01■■□□□ 1.27
DDX39A-212ENST00000590260 KLRK1P26718 216 aa23.01■■□□□ 1.27
DDX39A-212ENST00000590260 CHRNDQ07001 517 aa23.01■■□□□ 1.27
DDX39A-212ENST00000590260 IFIT5Q13325 482 aaKnown RBP23.01■■□□□ 1.27
DDX39A-212ENST00000590260 SMC1BQ8NDV3 1235 aa23.01■■□□□ 1.27
DDX39A-212ENST00000590260 EYA3Q99504 573 aa23.01■■□□□ 1.27
DDX39A-212ENST00000590260 API5Q9BZZ5 524 aaKnown RBP23.01■■□□□ 1.27
DDX39A-212ENST00000590260 SHTN1A0MZ66 631 aa23■■□□□ 1.27
DDX39A-212ENST00000590260 GMPSP49915 693 aaPredicted RBP23■■□□□ 1.27
DDX39A-212ENST00000590260 ARHGAP45Q92619 1136 aa23■■□□□ 1.27
DDX39A-212ENST00000590260 ZC3H12CQ9C0D7 883 aaKnown RBP23■■□□□ 1.27
DDX39A-212ENST00000590260 KIF16BQ96L93 1317 aa23■■□□□ 1.27
DDX39A-212ENST00000590260 MED23Q9ULK4 1368 aa23■■□□□ 1.27
DDX39A-212ENST00000590260 PSMD14O00487 310 aa22.99■■□□□ 1.27
DDX39A-212ENST00000590260 TRIM27P14373 513 aa22.99■■□□□ 1.27
DDX39A-212ENST00000590260 PUS3Q9BZE2 481 aaKnown RBP22.99■■□□□ 1.27
DDX39A-212ENST00000590260 HELBQ8NG08 1087 aaPredicted RBP22.98■■□□□ 1.27
DDX39A-212ENST00000590260 MPHOSPH8Q99549 860 aa22.98■■□□□ 1.27
DDX39A-212ENST00000590260 GPRC5DQ9NZD1 345 aa22.98■■□□□ 1.27
DDX39A-212ENST00000590260 ZBTB12Q9Y330 459 aaPredicted RBP22.98■■□□□ 1.27
DDX39A-212ENST00000590260 CEP350Q5VT06 3117 aa22.97■■□□□ 1.27
DDX39A-212ENST00000590260 TAF5LO75529 589 aa22.97■■□□□ 1.27
DDX39A-212ENST00000590260 CCDC57Q2TAC2 916 aa22.97■■□□□ 1.27
DDX39A-212ENST00000590260 CHADLQ6NUI6 762 aa22.97■■□□□ 1.27
DDX39A-212ENST00000590260 HTRA3P83110 453 aa22.96■■□□□ 1.27
DDX39A-212ENST00000590260 EAPPQ56P03 285 aaPredicted RBP22.96■■□□□ 1.27
DDX39A-212ENST00000590260 INTS3Q68E01 1043 aaKnown RBP22.96■■□□□ 1.27
DDX39A-212ENST00000590260 LDHDQ86WU2 507 aa22.96■■□□□ 1.27
DDX39A-212ENST00000590260 LEMD3Q9Y2U8 911 aa22.96■■□□□ 1.27
DDX39A-212ENST00000590260 ZNF804BA4D1E1 1349 aa22.96■■□□□ 1.27
DDX39A-212ENST00000590260 RFX5P48382 616 aaPredicted RBP22.95■■□□□ 1.26
DDX39A-212ENST00000590260 TNIP1Q15025 636 aa22.95■■□□□ 1.26
DDX39A-212ENST00000590260 MEIS3Q99687 375 aa22.95■■□□□ 1.26
DDX39A-212ENST00000590260 ANKRD2Q9GZV1 360 aa22.95■■□□□ 1.26
DDX39A-212ENST00000590260 ITGBL1O95965 494 aaPredicted RBP22.94■■□□□ 1.26
DDX39A-212ENST00000590260 HIRAP54198 1017 aaPredicted RBP22.94■■□□□ 1.26
DDX39A-212ENST00000590260 ATF7IPQ6VMQ6 1270 aa22.94■■□□□ 1.26
DDX39A-212ENST00000590260 LDHAL6AQ6ZMR3 332 aa22.94■■□□□ 1.26
DDX39A-212ENST00000590260 KLHDC4Q8TBB5 520 aa22.94■■□□□ 1.26
DDX39A-212ENST00000590260 FRAT1Q92837 279 aaPredicted RBP22.94■■□□□ 1.26
DDX39A-212ENST00000590260 RIPOR2Q9Y4F9 1068 aa22.94■■□□□ 1.26
DDX39A-212ENST00000590260 VIL1P09327 827 aaKnown RBP22.93■■□□□ 1.26
DDX39A-212ENST00000590260 ZNF609O15014 1411 aa22.92■■□□□ 1.26
DDX39A-212ENST00000590260 PASKQ96RG2 1323 aa22.92■■□□□ 1.26
DDX39A-212ENST00000590260 LMOD1P29536 600 aaPredicted RBP22.92■■□□□ 1.26
DDX39A-212ENST00000590260 LRRC24Q50LG9 513 aa22.92■■□□□ 1.26
DDX39A-212ENST00000590260 PNMA8AQ86V59 439 aaPredicted RBP22.92■■□□□ 1.26
DDX39A-212ENST00000590260 TRPM4Q8TD43 1214 aa22.92■■□□□ 1.26
DDX39A-212ENST00000590260 EGFRP00533 1210 aa22.91■■□□□ 1.26
DDX39A-212ENST00000590260 APLP1P51693 650 aa22.91■■□□□ 1.26
DDX39A-212ENST00000590260 MAP1SQ66K74 1059 aaPredicted RBP22.91■■□□□ 1.26
DDX39A-212ENST00000590260 CLUAP1Q96AJ1 413 aa22.91■■□□□ 1.26
DDX39A-212ENST00000590260 GMLQ99445 158 aa22.91■■□□□ 1.26
DDX39A-212ENST00000590260 ADARB2Q9NS39 739 aaKnown RBP22.91■■□□□ 1.26
DDX39A-212ENST00000590260 CNOT7Q9UIV1 285 aaKnown RBP22.91■■□□□ 1.26
DDX39A-212ENST00000590260 LRRFIP2Q9Y608 721 aaKnown RBP22.91■■□□□ 1.26
DDX39A-212ENST00000590260 UBTFL1P0CB47 393 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms