RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 TNIP1Q15025 636 aa26.21■■□□□ 1.79
CIRBP-226ENST00000590171 MAP1SQ66K74 1059 aaPredicted RBP26.21■■□□□ 1.79
CIRBP-226ENST00000590171 MYH3P11055 1940 aa26.2■■□□□ 1.79
CIRBP-226ENST00000590171 SLFN5Q08AF3 891 aa26.2■■□□□ 1.78
CIRBP-226ENST00000590171 GGA1Q9UJY5 639 aa26.2■■□□□ 1.78
CIRBP-226ENST00000590171 DOK7Q18PE1 504 aa26.19■■□□□ 1.78
CIRBP-226ENST00000590171 USP50Q70EL3 339 aaPredicted RBP26.19■■□□□ 1.78
CIRBP-226ENST00000590171 XDHP47989 1333 aa26.18■■□□□ 1.78
CIRBP-226ENST00000590171 ECE2O60344 883 aa26.18■■□□□ 1.78
CIRBP-226ENST00000590171 CNTROBQ8N137 903 aa26.18■■□□□ 1.78
CIRBP-226ENST00000590171 CDCA7LQ96GN5 454 aa26.18■■□□□ 1.78
CIRBP-226ENST00000590171 ZC3H12CQ9C0D7 883 aaKnown RBP26.18■■□□□ 1.78
CIRBP-226ENST00000590171 CREBZFQ9NS37 354 aa26.18■■□□□ 1.78
CIRBP-226ENST00000590171 ADARB2Q9NS39 739 aaKnown RBP26.18■■□□□ 1.78
CIRBP-226ENST00000590171 BSDC1Q9NW68 430 aaPredicted RBP26.18■■□□□ 1.78
CIRBP-226ENST00000590171 CSF1RP07333 972 aa26.17■■□□□ 1.78
CIRBP-226ENST00000590171 FAM161AQ3B820 660 aa26.17■■□□□ 1.78
CIRBP-226ENST00000590171 BCL2L13Q9BXK5 485 aa26.17■■□□□ 1.78
CIRBP-226ENST00000590171 PSMD14O00487 310 aa26.16■■□□□ 1.78
CIRBP-226ENST00000590171 ITGA6P23229 1130 aa26.16■■□□□ 1.78
CIRBP-226ENST00000590171 MRPL50Q8N5N7 158 aaKnown RBP26.16■■□□□ 1.78
CIRBP-226ENST00000590171 JMYQ8N9B5 988 aa26.16■■□□□ 1.78
CIRBP-226ENST00000590171 KCNQ5Q9NR82 932 aa26.16■■□□□ 1.78
CIRBP-226ENST00000590171 MINPP1Q9UNW1 487 aa26.16■■□□□ 1.78
CIRBP-226ENST00000590171 ZBTB12Q9Y330 459 aaPredicted RBP26.15■■□□□ 1.78
CIRBP-226ENST00000590171 SPEF2Q9C093 1822 aa26.14■■□□□ 1.78
CIRBP-226ENST00000590171 ATP2B4P23634 1241 aa26.14■■□□□ 1.78
CIRBP-226ENST00000590171 FOXO4P98177 505 aa26.14■■□□□ 1.78
CIRBP-226ENST00000590171 SLC4A10Q6U841 1118 aa26.14■■□□□ 1.78
CIRBP-226ENST00000590171 SHTN1A0MZ66 631 aa26.13■■□□□ 1.77
CIRBP-226ENST00000590171 WTIPA6NIX2 430 aaPredicted RBP26.13■■□□□ 1.77
CIRBP-226ENST00000590171 GRM8O00222 908 aa26.13■■□□□ 1.77
CIRBP-226ENST00000590171 IGHMBP2P38935 993 aaKnown RBP26.13■■□□□ 1.77
CIRBP-226ENST00000590171 ALDH1L1O75891 902 aa26.12■■□□□ 1.77
CIRBP-226ENST00000590171 SSH1Q8WYL5 1049 aa26.12■■□□□ 1.77
CIRBP-226ENST00000590171 SRCIN1Q9C0H9 1055 aa26.12■■□□□ 1.77
CIRBP-226ENST00000590171 CNOT7Q9UIV1 285 aaKnown RBP26.12■■□□□ 1.77
CIRBP-226ENST00000590171 G3V3G9 751 aa26.11■■□□□ 1.77
CIRBP-226ENST00000590171 DCAF8Q5TAQ9 597 aa26.11■■□□□ 1.77
CIRBP-226ENST00000590171 MICALL2Q8IY33 904 aa26.11■■□□□ 1.77
CIRBP-226ENST00000590171 TRMT2AQ8IZ69 625 aaKnown RBP26.11■■□□□ 1.77
CIRBP-226ENST00000590171 TRPM4Q8TD43 1214 aa26.11■■□□□ 1.77
CIRBP-226ENST00000590171 DPF2Q92785 391 aa26.11■■□□□ 1.77
CIRBP-226ENST00000590171 TMEM88BA6NKF7 163 aa26.1■■□□□ 1.77
CIRBP-226ENST00000590171 CCT4P50991 539 aaKnown RBP26.1■■□□□ 1.77
CIRBP-226ENST00000590171 HIRAP54198 1017 aaPredicted RBP26.1■■□□□ 1.77
CIRBP-226ENST00000590171 EPHA10Q5JZY3 1008 aa26.1■■□□□ 1.77
CIRBP-226ENST00000590171 MED23Q9ULK4 1368 aa26.09■■□□□ 1.77
CIRBP-226ENST00000590171 ANKRD18BA2A2Z9 1011 aa26.09■■□□□ 1.77
CIRBP-226ENST00000590171 FMR1Q06787 632 aaKnown RBP eCLIP26.09■■□□□ 1.77
CIRBP-226ENST00000590171 C9orf78Q9NZ63 289 aaPredicted RBP26.09■■□□□ 1.77
CIRBP-226ENST00000590171 MKRN1Q9UHC7 482 aaKnown RBP26.09■■□□□ 1.77
CIRBP-226ENST00000590171 SCN9AQ15858 1988 aa26.08■■□□□ 1.77
CIRBP-226ENST00000590171 H7C1D1 291 aa26.08■■□□□ 1.77
CIRBP-226ENST00000590171 RPS12P25398 132 aaKnown RBP26.08■■□□□ 1.77
CIRBP-226ENST00000590171 MPHOSPH8Q99549 860 aa26.08■■□□□ 1.77
CIRBP-226ENST00000590171 PTPRCP08575 1304 aa26.08■■□□□ 1.77
CIRBP-226ENST00000590171 VIL1P09327 827 aaKnown RBP26.07■■□□□ 1.76
CIRBP-226ENST00000590171 LMBR1LQ6UX01 489 aa26.07■■□□□ 1.76
CIRBP-226ENST00000590171 CHMP3Q9Y3E7 222 aa26.07■■□□□ 1.76
CIRBP-226ENST00000590171 TRAF5O00463 557 aa26.06■■□□□ 1.76
CIRBP-226ENST00000590171 IFIT5Q13325 482 aaKnown RBP26.06■■□□□ 1.76
CIRBP-226ENST00000590171 PGAP2Q9UHJ9 254 aa26.06■■□□□ 1.76
CIRBP-226ENST00000590171 LEMD3Q9Y2U8 911 aa26.06■■□□□ 1.76
CIRBP-226ENST00000590171 CNTNAP1P78357 1384 aa26.06■■□□□ 1.76
CIRBP-226ENST00000590171 ALDH1L2Q3SY69 923 aa26.05■■□□□ 1.76
CIRBP-226ENST00000590171 SAMD7Q7Z3H4 446 aa26.05■■□□□ 1.76
CIRBP-226ENST00000590171 ZC3H15Q8WU90 426 aaKnown RBP26.05■■□□□ 1.76
CIRBP-226ENST00000590171 ANKRD2Q9GZV1 360 aa26.05■■□□□ 1.76
CIRBP-226ENST00000590171 EGFRP00533 1210 aa26.04■■□□□ 1.76
CIRBP-226ENST00000590171 NBPF7P0C2Y1 421 aaPredicted RBP26.04■■□□□ 1.76
CIRBP-226ENST00000590171 CHRNDQ07001 517 aa26.04■■□□□ 1.76
CIRBP-226ENST00000590171 PODNQ7Z5L7 613 aa26.04■■□□□ 1.76
CIRBP-226ENST00000590171 SUCLG2Q96I99 432 aa26.04■■□□□ 1.76
CIRBP-226ENST00000590171 ZNF804BA4D1E1 1349 aa26.04■■□□□ 1.76
CIRBP-226ENST00000590171 ZNF609O15014 1411 aa26.04■■□□□ 1.76
CIRBP-226ENST00000590171 TBC1D10BQ4KMP7 808 aaPredicted RBP26.03■■□□□ 1.76
CIRBP-226ENST00000590171 RSBN1LQ6PCB5 846 aaPredicted RBP26.03■■□□□ 1.76
CIRBP-226ENST00000590171 TXNRD3Q86VQ6 643 aa26.03■■□□□ 1.76
CIRBP-226ENST00000590171 KAZALD1Q96I82 304 aa26.03■■□□□ 1.76
CIRBP-226ENST00000590171 GLIS2Q9BZE0 524 aaPredicted RBP26.03■■□□□ 1.76
CIRBP-226ENST00000590171 SMC4Q9NTJ3 1288 aa26.03■■□□□ 1.76
CIRBP-226ENST00000590171 UTYO14607 1347 aa26.03■■□□□ 1.76
CIRBP-226ENST00000590171 KLRK1P26718 216 aa26.02■■□□□ 1.76
CIRBP-226ENST00000590171 DIEXFQ68CQ4 756 aaKnown RBP26.02■■□□□ 1.76
CIRBP-226ENST00000590171 MIER1Q8N108 512 aa26.02■■□□□ 1.76
CIRBP-226ENST00000590171 CCDC57Q2TAC2 916 aa26.01■■□□□ 1.75
CIRBP-226ENST00000590171 ZNF594Q96JF6 807 aaPredicted RBP26.01■■□□□ 1.75
CIRBP-226ENST00000590171 PSME4Q14997 1843 aa26■■□□□ 1.75
CIRBP-226ENST00000590171 USP17L3A6NCW0 530 aa26■■□□□ 1.75
CIRBP-226ENST00000590171 USP17L4A6NCW7 530 aa26■■□□□ 1.75
CIRBP-226ENST00000590171 CT47B1P0C2W7 299 aaPredicted RBP26■■□□□ 1.75
CIRBP-226ENST00000590171 RBM26Q5T8P6 1007 aaKnown RBP26■■□□□ 1.75
CIRBP-226ENST00000590171 CST9Q5W186 159 aa26■■□□□ 1.75
CIRBP-226ENST00000590171 USP17L1Q7RTZ2 530 aa26■■□□□ 1.75
CIRBP-226ENST00000590171 AGBL3Q8NEM8 1001 aa26■■□□□ 1.75
CIRBP-226ENST00000590171 COA1Q9GZY4 146 aa26■■□□□ 1.75
CIRBP-226ENST00000590171 RASSF10A6NK89 507 aa25.99■■□□□ 1.75
CIRBP-226ENST00000590171 SNAP23O00161 211 aa25.99■■□□□ 1.75
CIRBP-226ENST00000590171 TAF5LO75529 589 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms