RNA–Protein interactions for RNA: ENST00000590118.5

CROCCP3-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 4 BASIC

Gene CROCCP3, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-204ENST00000590118 VIL1P09327 827 aaKnown RBP18.4■□□□□ 0.54
CROCCP3-204ENST00000590118 NECTIN2Q92692 538 aa18.4■□□□□ 0.54
CROCCP3-204ENST00000590118 ZNF428Q96B54 188 aa18.4■□□□□ 0.54
CROCCP3-204ENST00000590118 EYA3Q99504 573 aa18.4■□□□□ 0.54
CROCCP3-204ENST00000590118 PKN2Q16513 984 aaKnown RBP18.39■□□□□ 0.53
CROCCP3-204ENST00000590118 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
CROCCP3-204ENST00000590118 BABAM1Q9NWV8 329 aa18.39■□□□□ 0.53
CROCCP3-204ENST00000590118 MAPK8IP3Q9UPT6 1336 aa18.39■□□□□ 0.53
CROCCP3-204ENST00000590118 COL4A1P02462 1669 aa18.38■□□□□ 0.53
CROCCP3-204ENST00000590118 TBC1D16Q8TBP0 767 aa18.38■□□□□ 0.53
CROCCP3-204ENST00000590118 FAM89AQ96GI7 184 aa18.38■□□□□ 0.53
CROCCP3-204ENST00000590118 FKBP1BP68106 108 aa18.37■□□□□ 0.53
CROCCP3-204ENST00000590118 ZC3H12CQ9C0D7 883 aaKnown RBP18.37■□□□□ 0.53
CROCCP3-204ENST00000590118 HDAC9Q9UKV0 1011 aa18.37■□□□□ 0.53
CROCCP3-204ENST00000590118 ZNF280AP59817 542 aaPredicted RBP18.36■□□□□ 0.53
CROCCP3-204ENST00000590118 SCARF1Q14162 830 aa18.36■□□□□ 0.53
CROCCP3-204ENST00000590118 ANGEL2Q5VTE6 544 aaKnown RBP18.36■□□□□ 0.53
CROCCP3-204ENST00000590118 ZNF296Q8WUU4 475 aaPredicted RBP18.36■□□□□ 0.53
CROCCP3-204ENST00000590118 ISCA1Q9BUE6 129 aa18.36■□□□□ 0.53
CROCCP3-204ENST00000590118 PAPPA2Q9BXP8 1791 aa18.35■□□□□ 0.53
CROCCP3-204ENST00000590118 RIPK4P57078 832 aa18.35■□□□□ 0.53
CROCCP3-204ENST00000590118 RPS8P62241 208 aaKnown RBP18.35■□□□□ 0.53
CROCCP3-204ENST00000590118 PLBD2Q8NHP8 589 aa18.35■□□□□ 0.53
CROCCP3-204ENST00000590118 TBC1D8O95759 1140 aa18.34■□□□□ 0.53
CROCCP3-204ENST00000590118 AGBL3Q8NEM8 1001 aa18.34■□□□□ 0.53
CROCCP3-204ENST00000590118 PODXL2Q9NZ53 605 aa18.34■□□□□ 0.53
CROCCP3-204ENST00000590118 ZNF609O15014 1411 aa18.33■□□□□ 0.53
CROCCP3-204ENST00000590118 ATP5J2-PTCD1G3V325 749 aa18.33■□□□□ 0.52
CROCCP3-204ENST00000590118 G3V3G9 751 aa18.33■□□□□ 0.52
CROCCP3-204ENST00000590118 DCAF8Q5TAQ9 597 aa18.33■□□□□ 0.52
CROCCP3-204ENST00000590118 RSBN1LQ6PCB5 846 aaPredicted RBP18.33■□□□□ 0.52
CROCCP3-204ENST00000590118 ANKRD13DQ6ZTN6 518 aa18.33■□□□□ 0.52
CROCCP3-204ENST00000590118 MOB2Q70IA6 237 aa18.33■□□□□ 0.52
CROCCP3-204ENST00000590118 CHPF2Q9P2E5 772 aa18.33■□□□□ 0.52
CROCCP3-204ENST00000590118 PSME4Q14997 1843 aa18.33■□□□□ 0.52
CROCCP3-204ENST00000590118 PITPNM2Q9BZ72 1349 aa18.32■□□□□ 0.52
CROCCP3-204ENST00000590118 IRS4O14654 1257 aaPredicted RBP18.32■□□□□ 0.52
CROCCP3-204ENST00000590118 KRT24Q2M2I5 525 aa18.32■□□□□ 0.52
CROCCP3-204ENST00000590118 RTL5Q5HYW3 569 aaPredicted RBP18.32■□□□□ 0.52
CROCCP3-204ENST00000590118 UBE2Q2LH0YL09 131 aa18.31■□□□□ 0.52
CROCCP3-204ENST00000590118 GPR25O00155 361 aa18.31■□□□□ 0.52
CROCCP3-204ENST00000590118 UFL1O94874 794 aa18.31■□□□□ 0.52
CROCCP3-204ENST00000590118 TM4SF4P48230 202 aa18.31■□□□□ 0.52
CROCCP3-204ENST00000590118 NOM1Q5C9Z4 860 aaKnown RBP18.31■□□□□ 0.52
CROCCP3-204ENST00000590118 FBXO46Q6PJ61 603 aaPredicted RBP18.31■□□□□ 0.52
CROCCP3-204ENST00000590118 GMLQ99445 158 aa18.31■□□□□ 0.52
CROCCP3-204ENST00000590118 MYOZ2Q9NPC6 264 aa18.31■□□□□ 0.52
CROCCP3-204ENST00000590118 USP17L8P0C7I0 530 aa18.3■□□□□ 0.52
CROCCP3-204ENST00000590118 GCC1Q96CN9 775 aa18.3■□□□□ 0.52
CROCCP3-204ENST00000590118 ANKIB1Q9P2G1 1089 aa18.3■□□□□ 0.52
CROCCP3-204ENST00000590118 GGA1Q9UJY5 639 aa18.3■□□□□ 0.52
CROCCP3-204ENST00000590118 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
CROCCP3-204ENST00000590118 LMOD3Q0VAK6 560 aa18.29■□□□□ 0.52
CROCCP3-204ENST00000590118 TRIM28Q13263 835 aaKnown RBP18.29■□□□□ 0.52
CROCCP3-204ENST00000590118 SEC31BQ9NQW1 1179 aa18.29■□□□□ 0.52
CROCCP3-204ENST00000590118 SCAF8Q9UPN6 1271 aaKnown RBP18.29■□□□□ 0.52
CROCCP3-204ENST00000590118 CHL1O00533 1208 aa18.28■□□□□ 0.52
CROCCP3-204ENST00000590118 PRAMEF18Q5VWM3 479 aa18.28■□□□□ 0.52
CROCCP3-204ENST00000590118 KIAA0100Q14667 2235 aaKnown RBP18.27■□□□□ 0.52
CROCCP3-204ENST00000590118 HDGFL1Q5TGJ6 251 aa18.27■□□□□ 0.52
CROCCP3-204ENST00000590118 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
CROCCP3-204ENST00000590118 USP17L3A6NCW0 530 aa18.26■□□□□ 0.51
CROCCP3-204ENST00000590118 USP17L4A6NCW7 530 aa18.26■□□□□ 0.51
CROCCP3-204ENST00000590118 FKTNO75072 461 aa18.26■□□□□ 0.51
CROCCP3-204ENST00000590118 TTLL12Q14166 644 aaPredicted RBP18.26■□□□□ 0.51
CROCCP3-204ENST00000590118 USP17L1Q7RTZ2 530 aa18.26■□□□□ 0.51
CROCCP3-204ENST00000590118 PODNQ7Z5L7 613 aa18.26■□□□□ 0.51
CROCCP3-204ENST00000590118 ZBTB38Q8NAP3 1195 aaPredicted RBP18.26■□□□□ 0.51
CROCCP3-204ENST00000590118 CFHR5Q9BXR6 569 aa18.26■□□□□ 0.51
CROCCP3-204ENST00000590118 HOXB7P09629 217 aa18.25■□□□□ 0.51
CROCCP3-204ENST00000590118 MKRN3Q13064 507 aaKnown RBP18.25■□□□□ 0.51
CROCCP3-204ENST00000590118 NBPF9Q3BBW0 867 aa18.25■□□□□ 0.51
CROCCP3-204ENST00000590118 R3HDMLQ9H3Y0 253 aa18.25■□□□□ 0.51
CROCCP3-204ENST00000590118 HYPKQ9NX55 129 aa18.25■□□□□ 0.51
CROCCP3-204ENST00000590118 HSP90B1P14625 803 aaKnown RBP18.24■□□□□ 0.51
CROCCP3-204ENST00000590118 SREBF2Q12772 1141 aa18.24■□□□□ 0.51
CROCCP3-204ENST00000590118 LAS1LQ9Y4W2 734 aaKnown RBP18.24■□□□□ 0.51
CROCCP3-204ENST00000590118 XDHP47989 1333 aa18.23■□□□□ 0.51
CROCCP3-204ENST00000590118 NF2P35240 595 aa18.23■□□□□ 0.51
CROCCP3-204ENST00000590118 CCDC152Q4G0S7 254 aa18.23■□□□□ 0.51
CROCCP3-204ENST00000590118 HABP4Q5JVS0 413 aaKnown RBP18.23■□□□□ 0.51
CROCCP3-204ENST00000590118 WNT10BO00744 389 aa18.22■□□□□ 0.51
CROCCP3-204ENST00000590118 ATP2B4P23634 1241 aa18.22■□□□□ 0.51
CROCCP3-204ENST00000590118 PTPN12Q05209 780 aaKnown RBP18.22■□□□□ 0.51
CROCCP3-204ENST00000590118 NEUROD2Q15784 382 aa18.22■□□□□ 0.51
CROCCP3-204ENST00000590118 PDE8AO60658 829 aa18.21■□□□□ 0.51
CROCCP3-204ENST00000590118 RIC3Q7Z5B4 369 aa18.21■□□□□ 0.51
CROCCP3-204ENST00000590118 ANKRD18AQ8IVF6 992 aa18.21■□□□□ 0.51
CROCCP3-204ENST00000590118 CCDC85AQ96PX6 553 aaPredicted RBP18.21■□□□□ 0.51
CROCCP3-204ENST00000590118 DACT2Q5SW24 774 aa18.2■□□□□ 0.5
CROCCP3-204ENST00000590118 ARMC9Q7Z3E5 817 aa18.2■□□□□ 0.5
CROCCP3-204ENST00000590118 OGFOD1Q8N543 542 aa18.2■□□□□ 0.5
CROCCP3-204ENST00000590118 MXD3Q9BW11 206 aa18.2■□□□□ 0.5
CROCCP3-204ENST00000590118 TRIM35Q9UPQ4 493 aa18.2■□□□□ 0.5
CROCCP3-204ENST00000590118 WTIPA6NIX2 430 aaPredicted RBP18.19■□□□□ 0.5
CROCCP3-204ENST00000590118 ALDH1A1P00352 501 aa18.19■□□□□ 0.5
CROCCP3-204ENST00000590118 PCCAP05165 728 aaPredicted RBP18.19■□□□□ 0.5
CROCCP3-204ENST00000590118 DUSP27Q5VZP5 1158 aa18.19■□□□□ 0.5
CROCCP3-204ENST00000590118 SPRYD7Q5W111 196 aa18.19■□□□□ 0.5
CROCCP3-204ENST00000590118 CCDC191Q8NCU4 936 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms