RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 ADM5C9JUS6 153 aa18.06■□□□□ 0.48
SF3A2-205ENST00000590034 RIC3Q7Z5B4 369 aa18.06■□□□□ 0.48
SF3A2-205ENST00000590034 ZBTB38Q8NAP3 1195 aaPredicted RBP18.06■□□□□ 0.48
SF3A2-205ENST00000590034 ELL2O00472 640 aaPredicted RBP18.05■□□□□ 0.48
SF3A2-205ENST00000590034 RPS12P25398 132 aaKnown RBP18.05■□□□□ 0.48
SF3A2-205ENST00000590034 HUNKP57058 714 aa18.05■□□□□ 0.48
SF3A2-205ENST00000590034 KRT26Q7Z3Y9 468 aa18.05■□□□□ 0.48
SF3A2-205ENST00000590034 EYA3Q99504 573 aa18.05■□□□□ 0.48
SF3A2-205ENST00000590034 MYD88Q99836 296 aa18.05■□□□□ 0.48
SF3A2-205ENST00000590034 APAF1O14727 1248 aa18.04■□□□□ 0.48
SF3A2-205ENST00000590034 CA12O43570 354 aa18.04■□□□□ 0.48
SF3A2-205ENST00000590034 GOLGA2Q08379 1002 aa18.04■□□□□ 0.48
SF3A2-205ENST00000590034 FAM161AQ3B820 660 aa18.04■□□□□ 0.48
SF3A2-205ENST00000590034 RBM26Q5T8P6 1007 aaKnown RBP18.04■□□□□ 0.48
SF3A2-205ENST00000590034 JARID2Q92833 1246 aaPredicted RBP18.04■□□□□ 0.48
SF3A2-205ENST00000590034 IFT57Q9NWB7 429 aa18.04■□□□□ 0.48
SF3A2-205ENST00000590034 PODXL2Q9NZ53 605 aa18.04■□□□□ 0.48
SF3A2-205ENST00000590034 ASTN2O75129 1339 aaPredicted RBP18.03■□□□□ 0.48
SF3A2-205ENST00000590034 SPEF2Q9C093 1822 aa18.03■□□□□ 0.48
SF3A2-205ENST00000590034 FAM155AB1AL88 458 aaPredicted RBP18.03■□□□□ 0.48
SF3A2-205ENST00000590034 NOGQ13253 232 aa18.03■□□□□ 0.48
SF3A2-205ENST00000590034 KIF4BQ2VIQ3 1234 aa18.03■□□□□ 0.48
SF3A2-205ENST00000590034 C8orf58Q8NAV2 365 aa18.03■□□□□ 0.48
SF3A2-205ENST00000590034 PRKRIP1Q9H875 184 aaPredicted RBP18.03■□□□□ 0.48
SF3A2-205ENST00000590034 ZNF646O15015 1829 aaPredicted RBP18.02■□□□□ 0.48
SF3A2-205ENST00000590034 MYH3P11055 1940 aa18.02■□□□□ 0.48
SF3A2-205ENST00000590034 CCDC85CA6NKD9 419 aa18.02■□□□□ 0.48
SF3A2-205ENST00000590034 UFL1O94874 794 aa18.02■□□□□ 0.48
SF3A2-205ENST00000590034 VIL1P09327 827 aaKnown RBP18.02■□□□□ 0.48
SF3A2-205ENST00000590034 CCDC85AQ96PX6 553 aaPredicted RBP18.02■□□□□ 0.48
SF3A2-205ENST00000590034 GBA2Q9HCG7 927 aaPredicted RBP18.02■□□□□ 0.48
SF3A2-205ENST00000590034 ZNF609O15014 1411 aa18.01■□□□□ 0.47
SF3A2-205ENST00000590034 PCCAP05165 728 aaPredicted RBP18.01■□□□□ 0.47
SF3A2-205ENST00000590034 GNAI1P63096 354 aa18.01■□□□□ 0.47
SF3A2-205ENST00000590034 CCDC191Q8NCU4 936 aa18.01■□□□□ 0.47
SF3A2-205ENST00000590034 ZC3H12CQ9C0D7 883 aaKnown RBP18.01■□□□□ 0.47
SF3A2-205ENST00000590034 MCOLN1Q9GZU1 580 aa18.01■□□□□ 0.47
SF3A2-205ENST00000590034 GGA3Q9NZ52 723 aa18.01■□□□□ 0.47
SF3A2-205ENST00000590034 ANKIB1Q9P2G1 1089 aa18.01■□□□□ 0.47
SF3A2-205ENST00000590034 PDE8AO60658 829 aa18■□□□□ 0.47
SF3A2-205ENST00000590034 CCDC152Q4G0S7 254 aa18■□□□□ 0.47
SF3A2-205ENST00000590034 RGMBQ6NW40 437 aa18■□□□□ 0.47
SF3A2-205ENST00000590034 DCPSQ96C86 337 aaKnown RBP18■□□□□ 0.47
SF3A2-205ENST00000590034 METTL22Q9BUU2 404 aaPredicted RBP18■□□□□ 0.47
SF3A2-205ENST00000590034 CWC25Q9NXE8 425 aaPredicted RBP18■□□□□ 0.47
SF3A2-205ENST00000590034 GGA1Q9UJY5 639 aa18■□□□□ 0.47
SF3A2-205ENST00000590034 WTIPA6NIX2 430 aaPredicted RBP17.99■□□□□ 0.47
SF3A2-205ENST00000590034 TSPYL6Q8N831 410 aa17.99■□□□□ 0.47
SF3A2-205ENST00000590034 AKAP11Q9UKA4 1901 aa17.99■□□□□ 0.47
SF3A2-205ENST00000590034 RGS19P49795 217 aa17.98■□□□□ 0.47
SF3A2-205ENST00000590034 ZNF280AP59817 542 aaPredicted RBP17.98■□□□□ 0.47
SF3A2-205ENST00000590034 GMLQ99445 158 aa17.98■□□□□ 0.47
SF3A2-205ENST00000590034 IGKV5-2P06315 115 aa17.97■□□□□ 0.47
SF3A2-205ENST00000590034 HSP90B1P14625 803 aaKnown RBP17.97■□□□□ 0.47
SF3A2-205ENST00000590034 RSBN1LQ6PCB5 846 aaPredicted RBP17.97■□□□□ 0.47
SF3A2-205ENST00000590034 SULF1Q8IWU6 871 aa17.97■□□□□ 0.47
SF3A2-205ENST00000590034 C2orf69Q8N8R5 385 aa17.97■□□□□ 0.47
SF3A2-205ENST00000590034 CDCA5Q96FF9 252 aa17.97■□□□□ 0.47
SF3A2-205ENST00000590034 MAP3K2Q9Y2U5 619 aa17.97■□□□□ 0.47
SF3A2-205ENST00000590034 XDHP47989 1333 aa17.97■□□□□ 0.47
SF3A2-205ENST00000590034 ZNF157P51786 506 aaPredicted RBP17.96■□□□□ 0.47
SF3A2-205ENST00000590034 KIF23Q02241 960 aaPredicted RBP17.96■□□□□ 0.47
SF3A2-205ENST00000590034 CALD1Q05682 793 aaKnown RBP17.96■□□□□ 0.47
SF3A2-205ENST00000590034 DGKZQ13574 1117 aa17.96■□□□□ 0.47
SF3A2-205ENST00000590034 ANGEL2Q5VTE6 544 aaKnown RBP17.96■□□□□ 0.47
SF3A2-205ENST00000590034 AGBL3Q8NEM8 1001 aa17.96■□□□□ 0.47
SF3A2-205ENST00000590034 PAPPA2Q9BXP8 1791 aa17.95■□□□□ 0.46
SF3A2-205ENST00000590034 G3V3G9 751 aa17.95■□□□□ 0.46
SF3A2-205ENST00000590034 SLC10A3P09131 477 aa17.95■□□□□ 0.46
SF3A2-205ENST00000590034 CTSWP56202 376 aa17.95■□□□□ 0.46
SF3A2-205ENST00000590034 SCARF1Q14162 830 aa17.95■□□□□ 0.46
SF3A2-205ENST00000590034 DCAF8Q5TAQ9 597 aa17.95■□□□□ 0.46
SF3A2-205ENST00000590034 CCDC30Q5VVM6 783 aa17.95■□□□□ 0.46
SF3A2-205ENST00000590034 ANKRD18AQ8IVF6 992 aa17.95■□□□□ 0.46
SF3A2-205ENST00000590034 CCDC102AQ96A19 550 aa17.95■□□□□ 0.46
SF3A2-205ENST00000590034 PI4KAP2A4QPH2 592 aa17.94■□□□□ 0.46
SF3A2-205ENST00000590034 DDX58O95786 925 aaKnown RBP17.94■□□□□ 0.46
SF3A2-205ENST00000590034 MLLT1Q03111 559 aaPredicted RBP17.94■□□□□ 0.46
SF3A2-205ENST00000590034 KSR2Q6VAB6 950 aa17.94■□□□□ 0.46
SF3A2-205ENST00000590034 PI4KAP1Q8N8J0 262 aa17.94■□□□□ 0.46
SF3A2-205ENST00000590034 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
SF3A2-205ENST00000590034 SAGE1Q9NXZ1 904 aa17.94■□□□□ 0.46
SF3A2-205ENST00000590034 SCAF8Q9UPN6 1271 aaKnown RBP17.94■□□□□ 0.46
SF3A2-205ENST00000590034 USP17L8P0C7I0 530 aa17.93■□□□□ 0.46
SF3A2-205ENST00000590034 ATP2B4P23634 1241 aa17.93■□□□□ 0.46
SF3A2-205ENST00000590034 CWF19L2Q2TBE0 894 aaKnown RBP17.93■□□□□ 0.46
SF3A2-205ENST00000590034 TTLL11Q8NHH1 800 aa17.93■□□□□ 0.46
SF3A2-205ENST00000590034 GREM2Q9H772 168 aa17.93■□□□□ 0.46
SF3A2-205ENST00000590034 MYOZ2Q9NPC6 264 aa17.93■□□□□ 0.46
SF3A2-205ENST00000590034 RNF186Q9NXI6 227 aa17.93■□□□□ 0.46
SF3A2-205ENST00000590034 MED23Q9ULK4 1368 aa17.92■□□□□ 0.46
SF3A2-205ENST00000590034 TNRC18O15417 2968 aaPredicted RBP17.92■□□□□ 0.46
SF3A2-205ENST00000590034 USP17L3A6NCW0 530 aa17.92■□□□□ 0.46
SF3A2-205ENST00000590034 USP17L4A6NCW7 530 aa17.92■□□□□ 0.46
SF3A2-205ENST00000590034 TRPA1O75762 1119 aa17.92■□□□□ 0.46
SF3A2-205ENST00000590034 USP17L1Q7RTZ2 530 aa17.92■□□□□ 0.46
SF3A2-205ENST00000590034 PODNQ7Z5L7 613 aa17.92■□□□□ 0.46
SF3A2-205ENST00000590034 RASAL3Q86YV0 1011 aa17.92■□□□□ 0.46
SF3A2-205ENST00000590034 CSRNP1Q96S65 589 aa17.92■□□□□ 0.46
SF3A2-205ENST00000590034 CDC5LQ99459 802 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms