RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, human

Gene TREM1, Length 1,876 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TREM1-206	ENST00000589882	VWDE	Q8N2E2	1590 aa		13.63	□□□□□ -0.23
TREM1-206	ENST00000589882	RDX	P35241	583 aa	Known RBP	13.63	□□□□□ -0.23
TREM1-206	ENST00000589882	BPIFA3	Q9BQP9	254 aa		13.63	□□□□□ -0.23
TREM1-206	ENST00000589882	PNPLA6	Q8IY17	1366 aa		13.63	□□□□□ -0.23
TREM1-206	ENST00000589882	ANKRD26	Q9UPS8	1709 aa		13.63	□□□□□ -0.23
TREM1-206	ENST00000589882	RICTOR	Q6R327	1708 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882		H0YHG0	523 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	SARNP	P82979	210 aa	Known RBP	13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	DDR1	Q08345	913 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	TUBB2A	Q13885	445 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	CDC37L1	Q7L3B6	337 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	TUBB2B	Q9BVA1	445 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	CFAP45	Q9UL16	551 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	RAB21	Q9UL25	225 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	CYP46A1	Q9Y6A2	500 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	ADGRB1	O14514	1584 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	TET3	O43151	1660 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	EVC2	Q86UK5	1308 aa		13.62	□□□□□ -0.23
TREM1-206	ENST00000589882	KLHL33	A6NCF5	533 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	ELF1	P32519	619 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	MCM6	Q14566	821 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	ILDR1	Q86SU0	546 aa	Predicted RBP	13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	AOPEP	Q8N6M6	819 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	CTCFL	Q8NI51	663 aa	Predicted RBP	13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	MIEF2	Q96C03	454 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	FAM212A	Q96EL1	285 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	IFT172	Q9UG01	1749 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	ATXN2	Q99700	1313 aa	Known RBP	13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	NBPF10	Q6P3W6	841 aa	Known RBP	13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	CCDC73	Q6ZRK6	1079 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	NUTM1	Q86Y26	1132 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	AFAP1L1	Q8TED9	768 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	CABS1	Q96KC9	395 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	VEZT	Q9HBM0	779 aa		13.61	□□□□□ -0.23
TREM1-206	ENST00000589882	EBAG9	O00559	213 aa		13.6	□□□□□ -0.23
TREM1-206	ENST00000589882	KIN	O60870	393 aa	Known RBP	13.6	□□□□□ -0.23
TREM1-206	ENST00000589882	LARGE1	O95461	756 aa		13.6	□□□□□ -0.23
TREM1-206	ENST00000589882	NF2	P35240	595 aa		13.6	□□□□□ -0.23
TREM1-206	ENST00000589882	NBPF9	Q3BBW0	867 aa		13.6	□□□□□ -0.23
TREM1-206	ENST00000589882	CEP112	Q8N8E3	955 aa		13.6	□□□□□ -0.23
TREM1-206	ENST00000589882	KAT2B	Q92831	832 aa		13.6	□□□□□ -0.23
TREM1-206	ENST00000589882	PGBD1	Q96JS3	809 aa		13.6	□□□□□ -0.23
TREM1-206	ENST00000589882	LSG1	Q9H089	658 aa	Known RBP	13.6	□□□□□ -0.23
TREM1-206	ENST00000589882	BICC1	Q9H694	974 aa	Known RBP	13.6	□□□□□ -0.23
TREM1-206	ENST00000589882	ARHGAP5	Q13017	1502 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	CBFA2T2	O43439	604 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	GCFC2	P16383	781 aa	Known RBP	13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	GPT	P24298	496 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	PRKAR2B	P31323	418 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	KCNV1	Q6PIU1	500 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	TEX11	Q8IYF3	940 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	PRPF38A	Q8NAV1	312 aa	Known RBP	13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	MSANTD4	Q8NCY6	345 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	CCDC102A	Q96A19	550 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	SYTL4	Q96C24	671 aa	Predicted RBP	13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	MEIS3	Q99687	375 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	XPO4	Q9C0E2	1151 aa	Known RBP	13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	MCM8	Q9UJA3	840 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	L1RE1	Q9UN81	338 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	CHD2	O14647	1828 aa	Known RBP	13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	PTPRM	P28827	1452 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	ELL2	O00472	640 aa	Predicted RBP	13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	LIG3	P49916	1009 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	CHMP4BP1	P59074	171 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	GNG11	P61952	73 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	BIRC2	Q13490	618 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	CRYM	Q14894	314 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	ANKRD1	Q15327	319 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	CWC27	Q6UX04	472 aa	Known RBP	13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	SRGAP1	Q7Z6B7	1085 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	FERMT3	Q86UX7	667 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	C8orf58	Q8NAV2	365 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	EPC1	Q9H2F5	836 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	FAM204A	Q9H8W3	233 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	VIPAS39	Q9H9C1	493 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	ZSWIM6	Q9HCJ5	1215 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	IFNK	Q9P0W0	207 aa		13.59	□□□□□ -0.23
TREM1-206	ENST00000589882	ADGRF5	Q8IZF2	1346 aa		13.58	□□□□□ -0.23
TREM1-206	ENST00000589882	CHUK	O15111	745 aa		13.58	□□□□□ -0.24
TREM1-206	ENST00000589882	ARHGAP6	O43182	974 aa		13.58	□□□□□ -0.24
TREM1-206	ENST00000589882	RAPGEF3	O95398	923 aa		13.58	□□□□□ -0.24
TREM1-206	ENST00000589882	SCP2	P22307	547 aa		13.58	□□□□□ -0.24
TREM1-206	ENST00000589882	INPP5B	P32019	993 aa		13.58	□□□□□ -0.24
TREM1-206	ENST00000589882	CCT4	P50991	539 aa	Known RBP	13.58	□□□□□ -0.24
TREM1-206	ENST00000589882	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
TREM1-206	ENST00000589882	TFIP11	Q9UBB9	837 aa	Known RBP	13.58	□□□□□ -0.24
TREM1-206	ENST00000589882	EXOC5	O00471	708 aa		13.57	□□□□□ -0.24
TREM1-206	ENST00000589882	SPATS2	Q86XZ4	545 aa	Known RBP	13.57	□□□□□ -0.24
TREM1-206	ENST00000589882	RUFY2	Q8WXA3	655 aa		13.57	□□□□□ -0.24
TREM1-206	ENST00000589882	FAM169A	Q9Y6X4	670 aa		13.57	□□□□□ -0.24
TREM1-206	ENST00000589882	VWA3A	A6NCI4	1184 aa		13.57	□□□□□ -0.24
TREM1-206	ENST00000589882	ANKRD65	E5RJM6	399 aa		13.57	□□□□□ -0.24
TREM1-206	ENST00000589882	SHOX2	O60902	331 aa	Predicted RBP	13.57	□□□□□ -0.24
TREM1-206	ENST00000589882	GNAI2	P04899	355 aa		13.57	□□□□□ -0.24
TREM1-206	ENST00000589882	AARS	P49588	968 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
TREM1-206	ENST00000589882	TSHZ3	Q63HK5	1081 aa		13.57	□□□□□ -0.24
TREM1-206	ENST00000589882	TMED8	Q6PL24	325 aa	Predicted RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms