RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 CHMP3Q9Y3E7 222 aa12.55□□□□□ -0.4
APOC1-205ENST00000589781 FER1L6Q2WGJ9 1857 aa12.55□□□□□ -0.4
APOC1-205ENST00000589781 NPHP1O15259 732 aa12.54□□□□□ -0.4
APOC1-205ENST00000589781 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
APOC1-205ENST00000589781 RFX5P48382 616 aaPredicted RBP12.54□□□□□ -0.4
APOC1-205ENST00000589781 C1QTNF8P60827 252 aa12.54□□□□□ -0.4
APOC1-205ENST00000589781 FOXO4P98177 505 aa12.54□□□□□ -0.4
APOC1-205ENST00000589781 TRIM28Q13263 835 aaKnown RBP12.54□□□□□ -0.4
APOC1-205ENST00000589781 HSP90AB4PQ58FF6 505 aa12.54□□□□□ -0.4
APOC1-205ENST00000589781 TSHZ3Q63HK5 1081 aa12.54□□□□□ -0.4
APOC1-205ENST00000589781 KIF1BPQ96EK5 621 aa12.54□□□□□ -0.4
APOC1-205ENST00000589781 SIL1Q9H173 461 aa12.54□□□□□ -0.4
APOC1-205ENST00000589781 LTBP3Q9NS15 1303 aa12.54□□□□□ -0.4
APOC1-205ENST00000589781 COL4A5P29400 1685 aa12.54□□□□□ -0.4
APOC1-205ENST00000589781 POTECB2RU33 542 aa12.53□□□□□ -0.4
APOC1-205ENST00000589781 SEC24BO95487 1268 aa12.53□□□□□ -0.4
APOC1-205ENST00000589781 LMNB1P20700 586 aa12.53□□□□□ -0.4
APOC1-205ENST00000589781 LMBR1LQ6UX01 489 aa12.53□□□□□ -0.4
APOC1-205ENST00000589781 FAM89AQ96GI7 184 aa12.53□□□□□ -0.4
APOC1-205ENST00000589781 GPBP1L1Q9HC44 474 aaPredicted RBP12.53□□□□□ -0.4
APOC1-205ENST00000589781 CACNA1SQ13698 1873 aa12.53□□□□□ -0.4
APOC1-205ENST00000589781 MX1P20591 662 aa12.52□□□□□ -0.41
APOC1-205ENST00000589781 GTF2E1P29083 439 aaPredicted RBP12.52□□□□□ -0.41
APOC1-205ENST00000589781 PDE1AP54750 535 aa12.52□□□□□ -0.41
APOC1-205ENST00000589781 ZBTB38Q8NAP3 1195 aaPredicted RBP12.52□□□□□ -0.41
APOC1-205ENST00000589781 CRAMP1Q96RY5 1269 aa12.52□□□□□ -0.41
APOC1-205ENST00000589781 TRMT112Q9UI30 125 aaKnown RBP12.52□□□□□ -0.41
APOC1-205ENST00000589781 CDHR2Q9BYE9 1310 aa12.52□□□□□ -0.41
APOC1-205ENST00000589781 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
APOC1-205ENST00000589781 G3BP1Q13283 466 aaKnown RBP eCLIP12.51□□□□□ -0.41
APOC1-205ENST00000589781 ERC1Q8IUD2 1116 aa12.51□□□□□ -0.41
APOC1-205ENST00000589781 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.51□□□□□ -0.41
APOC1-205ENST00000589781 CDC45O75419 566 aa12.5□□□□□ -0.41
APOC1-205ENST00000589781 SASH1O94885 1247 aa12.5□□□□□ -0.41
APOC1-205ENST00000589781 NLRP3Q96P20 1036 aa12.5□□□□□ -0.41
APOC1-205ENST00000589781 CCDC85AQ96PX6 553 aaPredicted RBP12.5□□□□□ -0.41
APOC1-205ENST00000589781 PLA2G12BQ9BX93 195 aa12.5□□□□□ -0.41
APOC1-205ENST00000589781 TAOK3Q9H2K8 898 aa12.5□□□□□ -0.41
APOC1-205ENST00000589781 COPRSQ9NQ92 184 aa12.5□□□□□ -0.41
APOC1-205ENST00000589781 ZNF277Q9NRM2 450 aaPredicted RBP12.5□□□□□ -0.41
APOC1-205ENST00000589781 AOX1Q06278 1338 aa12.5□□□□□ -0.41
APOC1-205ENST00000589781 SH3TC1Q8TE82 1336 aa12.5□□□□□ -0.41
APOC1-205ENST00000589781 ZNF609O15014 1411 aa12.49□□□□□ -0.41
APOC1-205ENST00000589781 ALDH1B1P30837 517 aa12.49□□□□□ -0.41
APOC1-205ENST00000589781 ANP32AP39687 249 aaKnown RBP12.49□□□□□ -0.41
APOC1-205ENST00000589781 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
APOC1-205ENST00000589781 FKBP4Q02790 459 aaKnown RBP eCLIP12.49□□□□□ -0.41
APOC1-205ENST00000589781 CCDC93Q567U6 631 aa12.49□□□□□ -0.41
APOC1-205ENST00000589781 AACSQ86V21 672 aa12.49□□□□□ -0.41
APOC1-205ENST00000589781 OSBPL3Q9H4L5 887 aa12.49□□□□□ -0.41
APOC1-205ENST00000589781 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
APOC1-205ENST00000589781 GLTPD2A6NH11 291 aa12.48□□□□□ -0.41
APOC1-205ENST00000589781 IRS4O14654 1257 aaPredicted RBP12.48□□□□□ -0.41
APOC1-205ENST00000589781 SDSP20132 328 aa12.48□□□□□ -0.41
APOC1-205ENST00000589781 CTSWP56202 376 aa12.48□□□□□ -0.41
APOC1-205ENST00000589781 SF3B3Q15393 1217 aaKnown RBP12.48□□□□□ -0.41
APOC1-205ENST00000589781 TBC1D9Q6ZT07 1266 aa12.48□□□□□ -0.41
APOC1-205ENST00000589781 CLASRPQ8N2M8 674 aaKnown RBP12.48□□□□□ -0.41
APOC1-205ENST00000589781 RPGRQ92834 1020 aaKnown RBP12.48□□□□□ -0.41
APOC1-205ENST00000589781 CELF1Q92879 486 aaKnown RBP12.48□□□□□ -0.41
APOC1-205ENST00000589781 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
APOC1-205ENST00000589781 RRAGCQ9HB90 399 aa12.48□□□□□ -0.41
APOC1-205ENST00000589781 TLR7Q9NYK1 1049 aaKnown RBP12.48□□□□□ -0.41
APOC1-205ENST00000589781 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
APOC1-205ENST00000589781 TAF1P21675 1872 aa12.48□□□□□ -0.41
APOC1-205ENST00000589781 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
APOC1-205ENST00000589781 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
APOC1-205ENST00000589781 ZNF541Q9H0D2 1346 aa12.47□□□□□ -0.41
APOC1-205ENST00000589781 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
APOC1-205ENST00000589781 RBM17Q96I25 401 aaKnown RBP12.47□□□□□ -0.41
APOC1-205ENST00000589781 ATP6V0A2Q9Y487 856 aa12.47□□□□□ -0.41
APOC1-205ENST00000589781 ARAP2Q8WZ64 1704 aa12.46□□□□□ -0.41
APOC1-205ENST00000589781 ZC3H4Q9UPT8 1303 aaKnown RBP12.46□□□□□ -0.41
APOC1-205ENST00000589781 DDNO94850 711 aaPredicted RBP12.46□□□□□ -0.41
APOC1-205ENST00000589781 IFIT2P09913 472 aaKnown RBP12.46□□□□□ -0.41
APOC1-205ENST00000589781 TFCP2Q12800 502 aa12.46□□□□□ -0.41
APOC1-205ENST00000589781 SOGA3Q5TF21 947 aa12.46□□□□□ -0.41
APOC1-205ENST00000589781 PI4K2BQ8TCG2 481 aa12.46□□□□□ -0.41
APOC1-205ENST00000589781 EAF2Q96CJ1 260 aaPredicted RBP12.46□□□□□ -0.41
APOC1-205ENST00000589781 PSMD1Q99460 953 aa12.46□□□□□ -0.41
APOC1-205ENST00000589781 CCDC8Q9H0W5 538 aaPredicted RBP12.46□□□□□ -0.41
APOC1-205ENST00000589781 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
APOC1-205ENST00000589781 DUOX1Q9NRD9 1551 aa12.46□□□□□ -0.42
APOC1-205ENST00000589781 TRIM6-TRIM34B2RNG4 842 aa12.45□□□□□ -0.42
APOC1-205ENST00000589781 PDE8AO60658 829 aa12.45□□□□□ -0.42
APOC1-205ENST00000589781 MAP4K4O95819 1239 aaPredicted RBP12.45□□□□□ -0.42
APOC1-205ENST00000589781 CSF1RP07333 972 aa12.45□□□□□ -0.42
APOC1-205ENST00000589781 GRAPQ13588 217 aa12.45□□□□□ -0.42
APOC1-205ENST00000589781 LRRC24Q50LG9 513 aa12.45□□□□□ -0.42
APOC1-205ENST00000589781 TNNI3KQ59H18 835 aa12.45□□□□□ -0.42
APOC1-205ENST00000589781 ATG9AQ7Z3C6 839 aa12.45□□□□□ -0.42
APOC1-205ENST00000589781 RTKN2Q8IZC4 609 aa12.45□□□□□ -0.42
APOC1-205ENST00000589781 TTLL11Q8NHH1 800 aa12.45□□□□□ -0.42
APOC1-205ENST00000589781 GRAPLQ8TC17 118 aaPredicted RBP12.45□□□□□ -0.42
APOC1-205ENST00000589781 PUS3Q9BZE2 481 aaKnown RBP12.45□□□□□ -0.42
APOC1-205ENST00000589781 GREM2Q9H772 168 aa12.45□□□□□ -0.42
APOC1-205ENST00000589781 FPGT-TNNI3KV9GXZ4 949 aa12.45□□□□□ -0.42
APOC1-205ENST00000589781 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
APOC1-205ENST00000589781 TTC41PQ6P2S7 1318 aa12.44□□□□□ -0.42
APOC1-205ENST00000589781 WTIPA6NIX2 430 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms