RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 CNNM1Q9NRU3 951 aa27.99■■■□□ 2.07
R3HDM4-205ENST00000589445 SNED1Q8TER0 1413 aa27.99■■■□□ 2.07
R3HDM4-205ENST00000589445 CC2D2BQ6DHV5 1058 aa27.98■■■□□ 2.07
R3HDM4-205ENST00000589445 TAOK3Q9H2K8 898 aa27.98■■■□□ 2.07
R3HDM4-205ENST00000589445 ZBTB40Q9NUA8 1239 aa27.98■■■□□ 2.07
R3HDM4-205ENST00000589445 NFKBIEO00221 500 aa27.97■■■□□ 2.07
R3HDM4-205ENST00000589445 DPP8Q6V1X1 898 aaPredicted RBP27.97■■■□□ 2.07
R3HDM4-205ENST00000589445 LDHAL6AQ6ZMR3 332 aa27.97■■■□□ 2.07
R3HDM4-205ENST00000589445 RTKN2Q8IZC4 609 aa27.97■■■□□ 2.07
R3HDM4-205ENST00000589445 BSDC1Q9NW68 430 aaPredicted RBP27.97■■■□□ 2.07
R3HDM4-205ENST00000589445 MTX1Q13505 466 aa27.96■■■□□ 2.07
R3HDM4-205ENST00000589445 SIL1Q9H173 461 aa27.96■■■□□ 2.07
R3HDM4-205ENST00000589445 ANKIB1Q9P2G1 1089 aa27.96■■■□□ 2.07
R3HDM4-205ENST00000589445 DICER1Q9UPY3 1922 aaKnown RBP27.96■■■□□ 2.07
R3HDM4-205ENST00000589445 PNMA6EA0A0J9YXQ4 647 aa27.95■■■□□ 2.06
R3HDM4-205ENST00000589445 GPSM2P81274 684 aa27.95■■■□□ 2.06
R3HDM4-205ENST00000589445 CEP85Q6P2H3 762 aa27.95■■■□□ 2.06
R3HDM4-205ENST00000589445 MPNDQ8N594 471 aa27.95■■■□□ 2.06
R3HDM4-205ENST00000589445 NSFL1CQ9UNZ2 370 aaKnown RBP27.95■■■□□ 2.06
R3HDM4-205ENST00000589445 RFX5P48382 616 aaPredicted RBP27.94■■■□□ 2.06
R3HDM4-205ENST00000589445 FKBP4Q02790 459 aaKnown RBP eCLIP27.94■■■□□ 2.06
R3HDM4-205ENST00000589445 PA2G4Q9UQ80 394 aaKnown RBP27.94■■■□□ 2.06
R3HDM4-205ENST00000589445 PUS3Q9BZE2 481 aaKnown RBP27.93■■■□□ 2.06
R3HDM4-205ENST00000589445 XDHP47989 1333 aa27.92■■■□□ 2.06
R3HDM4-205ENST00000589445 UFL1O94874 794 aa27.92■■■□□ 2.06
R3HDM4-205ENST00000589445 PTPN12Q05209 780 aaKnown RBP27.92■■■□□ 2.06
R3HDM4-205ENST00000589445 GRIPAP1Q4V328 841 aa27.92■■■□□ 2.06
R3HDM4-205ENST00000589445 MINPP1Q9UNW1 487 aa27.92■■■□□ 2.06
R3HDM4-205ENST00000589445 LTBP3Q9NS15 1303 aa27.92■■■□□ 2.06
R3HDM4-205ENST00000589445 CHRNDQ07001 517 aa27.91■■■□□ 2.06
R3HDM4-205ENST00000589445 LRRC24Q50LG9 513 aa27.91■■■□□ 2.06
R3HDM4-205ENST00000589445 ZNF277Q9NRM2 450 aaPredicted RBP27.91■■■□□ 2.06
R3HDM4-205ENST00000589445 C6orf229H3BNL8 230 aa27.9■■■□□ 2.06
R3HDM4-205ENST00000589445 ATP8B2P98198 1209 aa27.9■■■□□ 2.06
R3HDM4-205ENST00000589445 GGA1Q9UJY5 639 aa27.9■■■□□ 2.06
R3HDM4-205ENST00000589445 KCNJ4P48050 445 aa27.89■■■□□ 2.06
R3HDM4-205ENST00000589445 METTL24Q5JXM2 366 aa27.89■■■□□ 2.06
R3HDM4-205ENST00000589445 SUPT20HQ8NEM7 779 aa27.89■■■□□ 2.06
R3HDM4-205ENST00000589445 HELBQ8NG08 1087 aaPredicted RBP27.89■■■□□ 2.06
R3HDM4-205ENST00000589445 EXOC6Q8TAG9 804 aa27.89■■■□□ 2.06
R3HDM4-205ENST00000589445 GPR101Q96P66 508 aaPredicted RBP27.89■■■□□ 2.06
R3HDM4-205ENST00000589445 PSMD1Q99460 953 aa27.89■■■□□ 2.06
R3HDM4-205ENST00000589445 ANKRD2Q9GZV1 360 aa27.89■■■□□ 2.06
R3HDM4-205ENST00000589445 EYA2O00167 538 aa27.88■■■□□ 2.05
R3HDM4-205ENST00000589445 ZNF526Q8TF50 670 aaPredicted RBP27.88■■■□□ 2.05
R3HDM4-205ENST00000589445 RNF181Q9P0P0 153 aa27.88■■■□□ 2.05
R3HDM4-205ENST00000589445 OS9Q13438 667 aaPredicted RBP27.87■■■□□ 2.05
R3HDM4-205ENST00000589445 POLA2Q14181 598 aa27.87■■■□□ 2.05
R3HDM4-205ENST00000589445 SSH3Q8TE77 659 aa27.87■■■□□ 2.05
R3HDM4-205ENST00000589445 COPRSQ9NQ92 184 aa27.87■■■□□ 2.05
R3HDM4-205ENST00000589445 MROH5Q6ZUA9 1318 aa27.87■■■□□ 2.05
R3HDM4-205ENST00000589445 ARAP2Q8WZ64 1704 aa27.87■■■□□ 2.05
R3HDM4-205ENST00000589445 PPIP5K2O43314 1243 aa27.86■■■□□ 2.05
R3HDM4-205ENST00000589445 HMMRO75330 724 aa27.86■■■□□ 2.05
R3HDM4-205ENST00000589445 TAF5LO75529 589 aa27.86■■■□□ 2.05
R3HDM4-205ENST00000589445 LMNB1P20700 586 aa27.86■■■□□ 2.05
R3HDM4-205ENST00000589445 TBC1D16Q8TBP0 767 aa27.86■■■□□ 2.05
R3HDM4-205ENST00000589445 PODXL2Q9NZ53 605 aa27.86■■■□□ 2.05
R3HDM4-205ENST00000589445 COL4A5P29400 1685 aa27.86■■■□□ 2.05
R3HDM4-205ENST00000589445 ATP2B4P23634 1241 aa27.85■■■□□ 2.05
R3HDM4-205ENST00000589445 IARSP41252 1262 aaKnown RBP27.85■■■□□ 2.05
R3HDM4-205ENST00000589445 AOC3Q16853 763 aa27.85■■■□□ 2.05
R3HDM4-205ENST00000589445 C9orf131Q5VYM1 1079 aa27.85■■■□□ 2.05
R3HDM4-205ENST00000589445 RPAP2Q8IXW5 612 aaPredicted RBP27.85■■■□□ 2.05
R3HDM4-205ENST00000589445 POLLQ9UGP5 575 aa27.85■■■□□ 2.05
R3HDM4-205ENST00000589445 CIAO1O76071 339 aa27.84■■■□□ 2.05
R3HDM4-205ENST00000589445 PRELPP51888 382 aa27.84■■■□□ 2.05
R3HDM4-205ENST00000589445 EYA3Q99504 573 aa27.84■■■□□ 2.05
R3HDM4-205ENST00000589445 RTFDC1Q9BY42 306 aaPredicted RBP27.84■■■□□ 2.05
R3HDM4-205ENST00000589445 RIPOR2Q9Y4F9 1068 aa27.84■■■□□ 2.05
R3HDM4-205ENST00000589445 RIMBP2O15034 1052 aa27.83■■■□□ 2.05
R3HDM4-205ENST00000589445 ATG9AQ7Z3C6 839 aa27.83■■■□□ 2.05
R3HDM4-205ENST00000589445 LARGE2Q8N3Y3 721 aa27.83■■■□□ 2.05
R3HDM4-205ENST00000589445 ZNF804BA4D1E1 1349 aa27.83■■■□□ 2.05
R3HDM4-205ENST00000589445 SURF6O75683 361 aaKnown RBP27.82■■■□□ 2.04
R3HDM4-205ENST00000589445 IL15P40933 162 aaPredicted RBP27.82■■■□□ 2.04
R3HDM4-205ENST00000589445 G3BP1Q13283 466 aaKnown RBP eCLIP27.82■■■□□ 2.04
R3HDM4-205ENST00000589445 FBXO3Q9UK99 471 aa27.82■■■□□ 2.04
R3HDM4-205ENST00000589445 MYH13Q9UKX3 1938 aa27.81■■■□□ 2.04
R3HDM4-205ENST00000589445 WTIPA6NIX2 430 aaPredicted RBP27.81■■■□□ 2.04
R3HDM4-205ENST00000589445 WASHC4Q2M389 1173 aa27.81■■■□□ 2.04
R3HDM4-205ENST00000589445 SIRT2Q8IXJ6 389 aa27.81■■■□□ 2.04
R3HDM4-205ENST00000589445 LEMD3Q9Y2U8 911 aa27.81■■■□□ 2.04
R3HDM4-205ENST00000589445 MED23Q9ULK4 1368 aa27.81■■■□□ 2.04
R3HDM4-205ENST00000589445 SNAP23O00161 211 aa27.8■■■□□ 2.04
R3HDM4-205ENST00000589445 EXOC6BQ9Y2D4 811 aa27.8■■■□□ 2.04
R3HDM4-205ENST00000589445 NEFLP07196 543 aa27.79■■■□□ 2.04
R3HDM4-205ENST00000589445 KLRK1P26718 216 aa27.79■■■□□ 2.04
R3HDM4-205ENST00000589445 NIM1KQ8IY84 436 aa27.79■■■□□ 2.04
R3HDM4-205ENST00000589445 PCDHB15Q9Y5E8 787 aa27.79■■■□□ 2.04
R3HDM4-205ENST00000589445 G3V3G9 751 aa27.78■■■□□ 2.04
R3HDM4-205ENST00000589445 KIAA2012Q0VF49 1180 aa27.78■■■□□ 2.04
R3HDM4-205ENST00000589445 PUM3Q15397 648 aaKnown RBP27.78■■■□□ 2.04
R3HDM4-205ENST00000589445 DCAF8Q5TAQ9 597 aa27.78■■■□□ 2.04
R3HDM4-205ENST00000589445 VGLL2Q8N8G2 317 aa27.78■■■□□ 2.04
R3HDM4-205ENST00000589445 ZC3H12CQ9C0D7 883 aaKnown RBP27.78■■■□□ 2.04
R3HDM4-205ENST00000589445 CEP126Q9P2H0 1117 aa27.78■■■□□ 2.04
R3HDM4-205ENST00000589445 ZNF609O15014 1411 aa27.77■■■□□ 2.04
R3HDM4-205ENST00000589445 APBB1O00213 710 aa27.77■■■□□ 2.04
R3HDM4-205ENST00000589445 PDE8BO95263 885 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms