RNA–Protein interactions for RNA: ENST00000589343.1

PPP6R1-205, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 904 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-205ENST00000589343 SOGA3Q5TF21 947 aa16.52■□□□□ 0.24
PPP6R1-205ENST00000589343 ATG9AQ7Z3C6 839 aa16.52■□□□□ 0.24
PPP6R1-205ENST00000589343 SMC5Q8IY18 1101 aa16.52■□□□□ 0.24
PPP6R1-205ENST00000589343 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
PPP6R1-205ENST00000589343 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.24
PPP6R1-205ENST00000589343 CEP126Q9P2H0 1117 aa16.52■□□□□ 0.24
PPP6R1-205ENST00000589343 ZBTB47Q9UFB7 747 aaPredicted RBP16.52■□□□□ 0.24
PPP6R1-205ENST00000589343 EXOC6BQ9Y2D4 811 aa16.52■□□□□ 0.24
PPP6R1-205ENST00000589343 METTL24Q5JXM2 366 aa16.51■□□□□ 0.23
PPP6R1-205ENST00000589343 CENPQQ7L2Z9 268 aaPredicted RBP16.51■□□□□ 0.23
PPP6R1-205ENST00000589343 MINPP1Q9UNW1 487 aa16.51■□□□□ 0.23
PPP6R1-205ENST00000589343 GTF3C3Q9Y5Q9 886 aa16.51■□□□□ 0.23
PPP6R1-205ENST00000589343 LRP5O75197 1615 aa16.51■□□□□ 0.23
PPP6R1-205ENST00000589343 CHRNDQ07001 517 aa16.5■□□□□ 0.23
PPP6R1-205ENST00000589343 NLGN2Q8NFZ4 835 aa16.5■□□□□ 0.23
PPP6R1-205ENST00000589343 C7orf43Q8WVR3 580 aa16.5■□□□□ 0.23
PPP6R1-205ENST00000589343 LRRCC1Q9C099 1032 aa16.5■□□□□ 0.23
PPP6R1-205ENST00000589343 AKAP2Q9Y2D5 859 aa16.5■□□□□ 0.23
PPP6R1-205ENST00000589343 COL11A2P13942 1736 aaPredicted RBP16.49■□□□□ 0.23
PPP6R1-205ENST00000589343 RHPN1Q8TCX5 695 aa16.49■□□□□ 0.23
PPP6R1-205ENST00000589343 GPR108Q9NPR9 543 aa16.49■□□□□ 0.23
PPP6R1-205ENST00000589343 XDHP47989 1333 aa16.48■□□□□ 0.23
PPP6R1-205ENST00000589343 SASH1O94885 1247 aa16.48■□□□□ 0.23
PPP6R1-205ENST00000589343 PDE8BO95263 885 aa16.48■□□□□ 0.23
PPP6R1-205ENST00000589343 B4GALNT3Q6L9W6 998 aa16.48■□□□□ 0.23
PPP6R1-205ENST00000589343 RTKN2Q8IZC4 609 aa16.48■□□□□ 0.23
PPP6R1-205ENST00000589343 PODXL2Q9NZ53 605 aa16.48■□□□□ 0.23
PPP6R1-205ENST00000589343 ANKIB1Q9P2G1 1089 aa16.48■□□□□ 0.23
PPP6R1-205ENST00000589343 LEMD3Q9Y2U8 911 aa16.48■□□□□ 0.23
PPP6R1-205ENST00000589343 DLEC1Q9Y238 1755 aa16.48■□□□□ 0.23
PPP6R1-205ENST00000589343 KDM2BQ8NHM5 1336 aa16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 ATP2B4P23634 1241 aa16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 TFCP2Q12800 502 aa16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 UBE4AQ14139 1066 aa16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 CCDC93Q567U6 631 aa16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 ANKRD45Q5TZF3 282 aa16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 CLASRPQ8N2M8 674 aaKnown RBP16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 MPNDQ8N594 471 aa16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 VGLL2Q8N8G2 317 aa16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 NSFL1CQ9UNZ2 370 aaKnown RBP16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 BCS1LQ9Y276 419 aa16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 TAF1P21675 1872 aa16.47■□□□□ 0.23
PPP6R1-205ENST00000589343 KIAA1551Q9HCM1 1747 aa16.46■□□□□ 0.23
PPP6R1-205ENST00000589343 APBB1O00213 710 aa16.46■□□□□ 0.23
PPP6R1-205ENST00000589343 C21orf2O43822 256 aa16.46■□□□□ 0.23
PPP6R1-205ENST00000589343 KCNJ4P48050 445 aa16.46■□□□□ 0.23
PPP6R1-205ENST00000589343 PUM3Q15397 648 aaKnown RBP16.46■□□□□ 0.23
PPP6R1-205ENST00000589343 GGA1Q9UJY5 639 aa16.46■□□□□ 0.23
PPP6R1-205ENST00000589343 SLX4Q8IY92 1834 aa16.46■□□□□ 0.23
PPP6R1-205ENST00000589343 GPSM2P81274 684 aa16.45■□□□□ 0.22
PPP6R1-205ENST00000589343 NUCB1Q02818 461 aa16.45■□□□□ 0.22
PPP6R1-205ENST00000589343 DPP8Q6V1X1 898 aaPredicted RBP16.45■□□□□ 0.22
PPP6R1-205ENST00000589343 SUPT20HQ8NEM7 779 aa16.45■□□□□ 0.22
PPP6R1-205ENST00000589343 HELBQ8NG08 1087 aaPredicted RBP16.45■□□□□ 0.22
PPP6R1-205ENST00000589343 LPIN2Q92539 896 aa16.45■□□□□ 0.22
PPP6R1-205ENST00000589343 TAF5LO75529 589 aa16.44■□□□□ 0.22
PPP6R1-205ENST00000589343 IFIT1P09914 478 aaKnown RBP16.44■□□□□ 0.22
PPP6R1-205ENST00000589343 SLC5A1P13866 664 aa16.44■□□□□ 0.22
PPP6R1-205ENST00000589343 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
PPP6R1-205ENST00000589343 ZNF804BA4D1E1 1349 aa16.44■□□□□ 0.22
PPP6R1-205ENST00000589343 FGFR2P21802 821 aa16.43■□□□□ 0.22
PPP6R1-205ENST00000589343 ATP2B3Q16720 1220 aa16.43■□□□□ 0.22
PPP6R1-205ENST00000589343 TNNI3KQ59H18 835 aa16.43■□□□□ 0.22
PPP6R1-205ENST00000589343 CHD1LQ86WJ1 897 aa16.43■□□□□ 0.22
PPP6R1-205ENST00000589343 PSMD1Q99460 953 aa16.43■□□□□ 0.22
PPP6R1-205ENST00000589343 EYA3Q99504 573 aa16.43■□□□□ 0.22
PPP6R1-205ENST00000589343 RTFDC1Q9BY42 306 aaPredicted RBP16.43■□□□□ 0.22
PPP6R1-205ENST00000589343 VPS33BQ9H267 617 aa16.43■□□□□ 0.22
PPP6R1-205ENST00000589343 IL1RAPL2Q9NP60 686 aa16.43■□□□□ 0.22
PPP6R1-205ENST00000589343 FPGT-TNNI3KV9GXZ4 949 aa16.43■□□□□ 0.22
PPP6R1-205ENST00000589343 COL4A1P02462 1669 aa16.43■□□□□ 0.22
PPP6R1-205ENST00000589343 BRCA1P38398 1863 aaKnown RBP16.42■□□□□ 0.22
PPP6R1-205ENST00000589343 A0A1B0GUL7 405 aa16.42■□□□□ 0.22
PPP6R1-205ENST00000589343 C6orf229H3BNL8 230 aa16.42■□□□□ 0.22
PPP6R1-205ENST00000589343 UFL1O94874 794 aa16.42■□□□□ 0.22
PPP6R1-205ENST00000589343 IFIT2P09913 472 aaKnown RBP16.42■□□□□ 0.22
PPP6R1-205ENST00000589343 C15orf52Q6ZUT6 534 aaKnown RBP16.42■□□□□ 0.22
PPP6R1-205ENST00000589343 TBC1D16Q8TBP0 767 aa16.42■□□□□ 0.22
PPP6R1-205ENST00000589343 SMARCA5O60264 1052 aaPredicted RBP16.41■□□□□ 0.22
PPP6R1-205ENST00000589343 TIMM10P62072 90 aa16.41■□□□□ 0.22
PPP6R1-205ENST00000589343 FKBP4Q02790 459 aaKnown RBP eCLIP16.41■□□□□ 0.22
PPP6R1-205ENST00000589343 OLFM4Q6UX06 510 aa16.41■□□□□ 0.22
PPP6R1-205ENST00000589343 AACSQ86V21 672 aa16.41■□□□□ 0.22
PPP6R1-205ENST00000589343 EAF2Q96CJ1 260 aaPredicted RBP16.41■□□□□ 0.22
PPP6R1-205ENST00000589343 NEUROD6Q96NK8 337 aa16.41■□□□□ 0.22
PPP6R1-205ENST00000589343 POLLQ9UGP5 575 aa16.41■□□□□ 0.22
PPP6R1-205ENST00000589343 SPEF2Q9C093 1822 aa16.4■□□□□ 0.22
PPP6R1-205ENST00000589343 LRRC37AA6NMS7 1700 aa16.4■□□□□ 0.22
PPP6R1-205ENST00000589343 CAVIN4Q5BKX8 364 aa16.4■□□□□ 0.22
PPP6R1-205ENST00000589343 ZC3H12CQ9C0D7 883 aaKnown RBP16.4■□□□□ 0.22
PPP6R1-205ENST00000589343 LNPKQ9C0E8 428 aa16.4■□□□□ 0.22
PPP6R1-205ENST00000589343 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
PPP6R1-205ENST00000589343 GRIN3BO60391 1043 aa16.39■□□□□ 0.21
PPP6R1-205ENST00000589343 WASHC4Q2M389 1173 aa16.39■□□□□ 0.21
PPP6R1-205ENST00000589343 GORABQ5T7V8 394 aa16.39■□□□□ 0.21
PPP6R1-205ENST00000589343 XAGE2Q96GT9 111 aa16.39■□□□□ 0.21
PPP6R1-205ENST00000589343 GPATCH3Q96I76 525 aa16.39■□□□□ 0.21
PPP6R1-205ENST00000589343 TAOK3Q9H2K8 898 aa16.39■□□□□ 0.21
PPP6R1-205ENST00000589343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.39■□□□□ 0.21
PPP6R1-205ENST00000589343 LTBP3Q9NS15 1303 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms