RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 EAF2Q96CJ1 260 aaPredicted RBP12□□□□□ -0.49
VPS25-202ENST00000589219 SNRKQ9NRH2 765 aa12□□□□□ -0.49
VPS25-202ENST00000589219 FOXD4L1Q9NU39 408 aa12□□□□□ -0.49
VPS25-202ENST00000589219 WWC3Q9ULE0 1092 aa12□□□□□ -0.49
VPS25-202ENST00000589219 PALD1Q9ULE6 856 aa12□□□□□ -0.49
VPS25-202ENST00000589219 ISY1Q9ULR0 285 aaKnown RBP12□□□□□ -0.49
VPS25-202ENST00000589219 KIAA1551Q9HCM1 1747 aa12□□□□□ -0.49
VPS25-202ENST00000589219 A0A0G2JLW4 131 aa11.99□□□□□ -0.49
VPS25-202ENST00000589219 ATP5J2-PTCD1G3V325 749 aa11.99□□□□□ -0.49
VPS25-202ENST00000589219 PIP4K2AP48426 406 aaPredicted RBP11.99□□□□□ -0.49
VPS25-202ENST00000589219 TNNI3KQ59H18 835 aa11.99□□□□□ -0.49
VPS25-202ENST00000589219 INTS5Q6P9B9 1019 aaKnown RBP11.99□□□□□ -0.49
VPS25-202ENST00000589219 KIF6Q6ZMV9 814 aa11.99□□□□□ -0.49
VPS25-202ENST00000589219 TMX3Q96JJ7 454 aa11.99□□□□□ -0.49
VPS25-202ENST00000589219 SIL1Q9H173 461 aa11.99□□□□□ -0.49
VPS25-202ENST00000589219 GPR108Q9NPR9 543 aa11.99□□□□□ -0.49
VPS25-202ENST00000589219 ZNF219Q9P2Y4 722 aaPredicted RBP11.99□□□□□ -0.49
VPS25-202ENST00000589219 BCS1LQ9Y276 419 aa11.99□□□□□ -0.49
VPS25-202ENST00000589219 FPGT-TNNI3KV9GXZ4 949 aa11.99□□□□□ -0.49
VPS25-202ENST00000589219 BRCA1P38398 1863 aaKnown RBP11.98□□□□□ -0.49
VPS25-202ENST00000589219 ZNF609O15014 1411 aa11.98□□□□□ -0.49
VPS25-202ENST00000589219 MED23Q9ULK4 1368 aa11.98□□□□□ -0.49
VPS25-202ENST00000589219 CCDC171Q6TFL3 1326 aa11.98□□□□□ -0.49
VPS25-202ENST00000589219 STARD3NLO95772 234 aa11.98□□□□□ -0.49
VPS25-202ENST00000589219 CYP19A1P11511 503 aaPredicted RBP11.98□□□□□ -0.49
VPS25-202ENST00000589219 ATP5JP18859 108 aa11.98□□□□□ -0.49
VPS25-202ENST00000589219 CWC27Q6UX04 472 aaKnown RBP11.98□□□□□ -0.49
VPS25-202ENST00000589219 TTLL7Q6ZT98 887 aa11.98□□□□□ -0.49
VPS25-202ENST00000589219 DNAJC10Q8IXB1 793 aa11.98□□□□□ -0.49
VPS25-202ENST00000589219 KCNB2Q92953 911 aa11.98□□□□□ -0.49
VPS25-202ENST00000589219 ISCA1Q9BUE6 129 aa11.98□□□□□ -0.49
VPS25-202ENST00000589219 IL25Q9H293 177 aa11.98□□□□□ -0.49
VPS25-202ENST00000589219 SRP68Q9UHB9 627 aaKnown RBP11.98□□□□□ -0.49
VPS25-202ENST00000589219 SNX14Q9Y5W7 946 aa11.98□□□□□ -0.49
VPS25-202ENST00000589219 ARFGEF1Q9Y6D6 1849 aa11.97□□□□□ -0.49
VPS25-202ENST00000589219 CIAO1O76071 339 aa11.97□□□□□ -0.49
VPS25-202ENST00000589219 A1BGP04217 495 aa11.97□□□□□ -0.49
VPS25-202ENST00000589219 DPEP1P16444 411 aa11.97□□□□□ -0.49
VPS25-202ENST00000589219 FOXO4P98177 505 aa11.97□□□□□ -0.49
VPS25-202ENST00000589219 TRIM28Q13263 835 aaKnown RBP11.97□□□□□ -0.49
VPS25-202ENST00000589219 FSD1Q9BTV5 496 aa11.97□□□□□ -0.49
VPS25-202ENST00000589219 TM6SF1Q9BZW5 370 aa11.97□□□□□ -0.49
VPS25-202ENST00000589219 CCDC8Q9H0W5 538 aaPredicted RBP11.97□□□□□ -0.49
VPS25-202ENST00000589219 TLR7Q9NYK1 1049 aaKnown RBP11.97□□□□□ -0.49
VPS25-202ENST00000589219 PIM2Q9P1W9 311 aa11.97□□□□□ -0.49
VPS25-202ENST00000589219 FBXO3Q9UK99 471 aa11.97□□□□□ -0.49
VPS25-202ENST00000589219 SPEF2Q9C093 1822 aa11.97□□□□□ -0.49
VPS25-202ENST00000589219 BAG4O95429 457 aaKnown RBP11.96□□□□□ -0.49
VPS25-202ENST00000589219 IL15P40933 162 aaPredicted RBP11.96□□□□□ -0.49
VPS25-202ENST00000589219 HSP90AB3PQ58FF7 597 aa11.96□□□□□ -0.49
VPS25-202ENST00000589219 LMBR1LQ6UX01 489 aa11.96□□□□□ -0.49
VPS25-202ENST00000589219 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.49
VPS25-202ENST00000589219 ZNF526Q8TF50 670 aaPredicted RBP11.96□□□□□ -0.49
VPS25-202ENST00000589219 ANKRD36CQ5JPF3 1778 aa11.96□□□□□ -0.49
VPS25-202ENST00000589219 MYCNP04198 464 aaPredicted RBP11.95□□□□□ -0.5
VPS25-202ENST00000589219 TM4SF1P30408 202 aa11.95□□□□□ -0.5
VPS25-202ENST00000589219 TFCP2Q12800 502 aa11.95□□□□□ -0.5
VPS25-202ENST00000589219 NMIQ13287 307 aaPredicted RBP11.95□□□□□ -0.5
VPS25-202ENST00000589219 TCIRG1Q13488 830 aa11.95□□□□□ -0.5
VPS25-202ENST00000589219 USPL1Q5W0Q7 1092 aa11.95□□□□□ -0.5
VPS25-202ENST00000589219 KLHDC4Q8TBB5 520 aa11.95□□□□□ -0.5
VPS25-202ENST00000589219 PLA2G12BQ9BX93 195 aa11.95□□□□□ -0.5
VPS25-202ENST00000589219 ZBTB3Q9H5J0 574 aa11.95□□□□□ -0.5
VPS25-202ENST00000589219 NARFQ9UHQ1 456 aa11.95□□□□□ -0.5
VPS25-202ENST00000589219 DBNLQ9UJU6 430 aaKnown RBP11.95□□□□□ -0.5
VPS25-202ENST00000589219 RPAP1Q9BWH6 1393 aaPredicted RBP11.94□□□□□ -0.5
VPS25-202ENST00000589219 MAP3K15Q6ZN16 1313 aa11.94□□□□□ -0.5
VPS25-202ENST00000589219 CDHR2Q9BYE9 1310 aa11.94□□□□□ -0.5
VPS25-202ENST00000589219 GOLGA6L3A6NEY3 463 aa11.94□□□□□ -0.5
VPS25-202ENST00000589219 POLRMTO00411 1230 aaKnown RBP11.94□□□□□ -0.5
VPS25-202ENST00000589219 PCCAP05165 728 aaPredicted RBP11.94□□□□□ -0.5
VPS25-202ENST00000589219 ZKSCAN1P17029 563 aaPredicted RBP11.94□□□□□ -0.5
VPS25-202ENST00000589219 DDR1Q08345 913 aa11.94□□□□□ -0.5
VPS25-202ENST00000589219 DALRD3Q5D0E6 543 aaKnown RBP11.94□□□□□ -0.5
VPS25-202ENST00000589219 RNF20Q5VTR2 975 aa11.94□□□□□ -0.5
VPS25-202ENST00000589219 ZGPATQ8N5A5 531 aaKnown RBP11.94□□□□□ -0.5
VPS25-202ENST00000589219 TTC14Q96N46 770 aa11.94□□□□□ -0.5
VPS25-202ENST00000589219 HAUS7Q99871 368 aa11.94□□□□□ -0.5
VPS25-202ENST00000589219 UPF3BQ9BZI7 483 aaKnown RBP11.94□□□□□ -0.5
VPS25-202ENST00000589219 BOLA2Q9H3K6 86 aa11.94□□□□□ -0.5
VPS25-202ENST00000589219 HMG20BQ9P0W2 317 aa11.94□□□□□ -0.5
VPS25-202ENST00000589219 ZBTB1Q9Y2K1 713 aa11.94□□□□□ -0.5
VPS25-202ENST00000589219 CHMP3Q9Y3E7 222 aa11.94□□□□□ -0.5
VPS25-202ENST00000589219 FSD2A1L4K1 749 aa11.93□□□□□ -0.5
VPS25-202ENST00000589219 EYA2O00167 538 aa11.93□□□□□ -0.5
VPS25-202ENST00000589219 KCNA3P22001 575 aa11.93□□□□□ -0.5
VPS25-202ENST00000589219 PSMA5P28066 241 aa11.93□□□□□ -0.5
VPS25-202ENST00000589219 KLHL40Q2TBA0 621 aa11.93□□□□□ -0.5
VPS25-202ENST00000589219 VPS53Q5VIR6 699 aa11.93□□□□□ -0.5
VPS25-202ENST00000589219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.93□□□□□ -0.5
VPS25-202ENST00000589219 RBM8AQ9Y5S9 174 aaKnown RBP11.93□□□□□ -0.5
VPS25-202ENST00000589219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.93□□□□□ -0.5
VPS25-202ENST00000589219 ABCC12Q96J65 1359 aa11.92□□□□□ -0.5
VPS25-202ENST00000589219 SH3TC1Q8TE82 1336 aa11.92□□□□□ -0.5
VPS25-202ENST00000589219 A0A0D9SFI3 127 aa11.92□□□□□ -0.5
VPS25-202ENST00000589219 BRD1O95696 1058 aa11.92□□□□□ -0.5
VPS25-202ENST00000589219 KCNJ4P48050 445 aa11.92□□□□□ -0.5
VPS25-202ENST00000589219 NECTIN1Q15223 517 aa11.92□□□□□ -0.5
VPS25-202ENST00000589219 PRPF40BQ6NWY9 871 aaKnown RBP11.92□□□□□ -0.5
VPS25-202ENST00000589219 ATG9AQ7Z3C6 839 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms