RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 UFL1O94874 794 aa24.36■■□□□ 1.49
CIRBP-221ENST00000589161 IGHMBP2P38935 993 aaKnown RBP24.36■■□□□ 1.49
CIRBP-221ENST00000589161 SCNN1DP51172 638 aa24.36■■□□□ 1.49
CIRBP-221ENST00000589161 C9orf78Q9NZ63 289 aaPredicted RBP24.36■■□□□ 1.49
CIRBP-221ENST00000589161 CLEC11AQ9Y240 323 aa24.36■■□□□ 1.49
CIRBP-221ENST00000589161 XDHP47989 1333 aa24.35■■□□□ 1.49
CIRBP-221ENST00000589161 GRM8O00222 908 aa24.35■■□□□ 1.49
CIRBP-221ENST00000589161 RAD17O75943 681 aa24.35■■□□□ 1.49
CIRBP-221ENST00000589161 ITGA6P23229 1130 aa24.35■■□□□ 1.49
CIRBP-221ENST00000589161 ATP2B4P23634 1241 aa24.35■■□□□ 1.49
CIRBP-221ENST00000589161 YDJCA8MPS7 323 aa24.34■■□□□ 1.49
CIRBP-221ENST00000589161 EPS15P42566 896 aa24.34■■□□□ 1.49
CIRBP-221ENST00000589161 DBNDD1Q9H9R9 158 aa24.34■■□□□ 1.49
CIRBP-221ENST00000589161 MINPP1Q9UNW1 487 aa24.34■■□□□ 1.49
CIRBP-221ENST00000589161 G3V3G9 751 aa24.33■■□□□ 1.49
CIRBP-221ENST00000589161 FOXO4P98177 505 aa24.33■■□□□ 1.49
CIRBP-221ENST00000589161 FAM161AQ3B820 660 aa24.33■■□□□ 1.49
CIRBP-221ENST00000589161 DCAF8Q5TAQ9 597 aa24.33■■□□□ 1.49
CIRBP-221ENST00000589161 MPHOSPH8Q99549 860 aa24.33■■□□□ 1.49
CIRBP-221ENST00000589161 BCL2L13Q9BXK5 485 aa24.33■■□□□ 1.49
CIRBP-221ENST00000589161 GPRC5DQ9NZD1 345 aa24.33■■□□□ 1.49
CIRBP-221ENST00000589161 ANKRD18BA2A2Z9 1011 aa24.32■■□□□ 1.48
CIRBP-221ENST00000589161 ECE2O60344 883 aa24.32■■□□□ 1.48
CIRBP-221ENST00000589161 GMPSP49915 693 aaPredicted RBP24.32■■□□□ 1.48
CIRBP-221ENST00000589161 DOK7Q18PE1 504 aa24.32■■□□□ 1.48
CIRBP-221ENST00000589161 USP50Q70EL3 339 aaPredicted RBP24.32■■□□□ 1.48
CIRBP-221ENST00000589161 DNAJC5GQ8N7S2 189 aa24.32■■□□□ 1.48
CIRBP-221ENST00000589161 GPR101Q96P66 508 aaPredicted RBP24.32■■□□□ 1.48
CIRBP-221ENST00000589161 CEP350Q5VT06 3117 aa24.31■■□□□ 1.48
CIRBP-221ENST00000589161 IFIT5Q13325 482 aaKnown RBP24.31■■□□□ 1.48
CIRBP-221ENST00000589161 SMC4Q9NTJ3 1288 aa24.31■■□□□ 1.48
CIRBP-221ENST00000589161 MYH3P11055 1940 aa24.31■■□□□ 1.48
CIRBP-221ENST00000589161 HTRA3P83110 453 aa24.3■■□□□ 1.48
CIRBP-221ENST00000589161 ADARB2Q9NS39 739 aaKnown RBP24.3■■□□□ 1.48
CIRBP-221ENST00000589161 LTBP1Q14766 1721 aa24.3■■□□□ 1.48
CIRBP-221ENST00000589161 LMBR1LQ6UX01 489 aa24.29■■□□□ 1.48
CIRBP-221ENST00000589161 ANKRD2Q9GZV1 360 aa24.29■■□□□ 1.48
CIRBP-221ENST00000589161 CHMP3Q9Y3E7 222 aa24.29■■□□□ 1.48
CIRBP-221ENST00000589161 PSMD14O00487 310 aa24.28■■□□□ 1.48
CIRBP-221ENST00000589161 CCT4P50991 539 aaKnown RBP24.28■■□□□ 1.48
CIRBP-221ENST00000589161 CNTROBQ8N137 903 aa24.28■■□□□ 1.48
CIRBP-221ENST00000589161 DPF2Q92785 391 aa24.28■■□□□ 1.48
CIRBP-221ENST00000589161 LEMD3Q9Y2U8 911 aa24.28■■□□□ 1.48
CIRBP-221ENST00000589161 ITGBL1O95965 494 aaPredicted RBP24.27■■□□□ 1.48
CIRBP-221ENST00000589161 CCDC57Q2TAC2 916 aa24.27■■□□□ 1.48
CIRBP-221ENST00000589161 EPHA10Q5JZY3 1008 aa24.27■■□□□ 1.48
CIRBP-221ENST00000589161 MAP1SQ66K74 1059 aaPredicted RBP24.27■■□□□ 1.48
CIRBP-221ENST00000589161 CNOT7Q9UIV1 285 aaKnown RBP24.27■■□□□ 1.48
CIRBP-221ENST00000589161 UTYO14607 1347 aa24.27■■□□□ 1.48
CIRBP-221ENST00000589161 H7C1D1 291 aa24.26■■□□□ 1.47
CIRBP-221ENST00000589161 RPS12P25398 132 aaKnown RBP24.26■■□□□ 1.47
CIRBP-221ENST00000589161 KCNQ5Q9NR82 932 aa24.26■■□□□ 1.47
CIRBP-221ENST00000589161 PASKQ96RG2 1323 aa24.26■■□□□ 1.47
CIRBP-221ENST00000589161 NBPF7P0C2Y1 421 aaPredicted RBP24.25■■□□□ 1.47
CIRBP-221ENST00000589161 BRPF1P55201 1214 aaPredicted RBP24.25■■□□□ 1.47
CIRBP-221ENST00000589161 PODNQ7Z5L7 613 aa24.25■■□□□ 1.47
CIRBP-221ENST00000589161 KLRG1Q96E93 195 aa24.25■■□□□ 1.47
CIRBP-221ENST00000589161 CREBZFQ9NS37 354 aa24.25■■□□□ 1.47
CIRBP-221ENST00000589161 ZBTB12Q9Y330 459 aaPredicted RBP24.25■■□□□ 1.47
CIRBP-221ENST00000589161 VIL1P09327 827 aaKnown RBP24.24■■□□□ 1.47
CIRBP-221ENST00000589161 TAF7LQ5H9L4 462 aa24.24■■□□□ 1.47
CIRBP-221ENST00000589161 SUCLG2Q96I99 432 aa24.24■■□□□ 1.47
CIRBP-221ENST00000589161 MED23Q9ULK4 1368 aa24.24■■□□□ 1.47
CIRBP-221ENST00000589161 ADAMTSL1Q8N6G6 1762 aa24.24■■□□□ 1.47
CIRBP-221ENST00000589161 WTIPA6NIX2 430 aaPredicted RBP24.23■■□□□ 1.47
CIRBP-221ENST00000589161 HNRNPUQ00839 825 aaKnown RBP eCLIP24.23■■□□□ 1.47
CIRBP-221ENST00000589161 CHRNDQ07001 517 aa24.23■■□□□ 1.47
CIRBP-221ENST00000589161 MICALL2Q8IY33 904 aa24.23■■□□□ 1.47
CIRBP-221ENST00000589161 NOB1Q9ULX3 412 aaKnown RBP24.23■■□□□ 1.47
CIRBP-221ENST00000589161 ZNF804BA4D1E1 1349 aa24.23■■□□□ 1.47
CIRBP-221ENST00000589161 KCNJ4P48050 445 aa24.22■■□□□ 1.47
CIRBP-221ENST00000589161 RARSP54136 660 aaKnown RBP24.22■■□□□ 1.47
CIRBP-221ENST00000589161 LDHAL6AQ6ZMR3 332 aa24.21■■□□□ 1.47
CIRBP-221ENST00000589161 ZC3H15Q8WU90 426 aaKnown RBP24.21■■□□□ 1.47
CIRBP-221ENST00000589161 KAZALD1Q96I82 304 aa24.21■■□□□ 1.47
CIRBP-221ENST00000589161 API5Q9BZZ5 524 aaKnown RBP24.21■■□□□ 1.47
CIRBP-221ENST00000589161 TMEM88BA6NKF7 163 aa24.2■■□□□ 1.46
CIRBP-221ENST00000589161 COA1Q9GZY4 146 aa24.2■■□□□ 1.46
CIRBP-221ENST00000589161 USP44Q9H0E7 712 aa24.2■■□□□ 1.46
CIRBP-221ENST00000589161 PGAP2Q9UHJ9 254 aa24.2■■□□□ 1.46
CIRBP-221ENST00000589161 USP17L3A6NCW0 530 aa24.19■■□□□ 1.46
CIRBP-221ENST00000589161 USP17L4A6NCW7 530 aa24.19■■□□□ 1.46
CIRBP-221ENST00000589161 USP17L1Q7RTZ2 530 aa24.19■■□□□ 1.46
CIRBP-221ENST00000589161 AGBL3Q8NEM8 1001 aa24.19■■□□□ 1.46
CIRBP-221ENST00000589161 ZNF594Q96JF6 807 aaPredicted RBP24.19■■□□□ 1.46
CIRBP-221ENST00000589161 BICC1Q9H694 974 aaKnown RBP24.19■■□□□ 1.46
CIRBP-221ENST00000589161 CNNM1Q9NRU3 951 aa24.19■■□□□ 1.46
CIRBP-221ENST00000589161 SHTN1A0MZ66 631 aa24.18■■□□□ 1.46
CIRBP-221ENST00000589161 HIRAP54198 1017 aaPredicted RBP24.18■■□□□ 1.46
CIRBP-221ENST00000589161 RABL6Q3YEC7 729 aaPredicted RBP24.18■■□□□ 1.46
CIRBP-221ENST00000589161 RSBN1LQ6PCB5 846 aaPredicted RBP24.18■■□□□ 1.46
CIRBP-221ENST00000589161 TRPM4Q8TD43 1214 aa24.18■■□□□ 1.46
CIRBP-221ENST00000589161 TAF5LO75529 589 aa24.17■■□□□ 1.46
CIRBP-221ENST00000589161 TXNRD3Q86VQ6 643 aa24.17■■□□□ 1.46
CIRBP-221ENST00000589161 HELBQ8NG08 1087 aaPredicted RBP24.17■■□□□ 1.46
CIRBP-221ENST00000589161 ARHGAP45Q92619 1136 aa24.17■■□□□ 1.46
CIRBP-221ENST00000589161 SPEF2Q9C093 1822 aa24.17■■□□□ 1.46
CIRBP-221ENST00000589161 KIF16BQ96L93 1317 aa24.16■■□□□ 1.46
CIRBP-221ENST00000589161 SAMD7Q7Z3H4 446 aa24.16■■□□□ 1.46
CIRBP-221ENST00000589161 JMYQ8N9B5 988 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms