RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 ME3Q16798 604 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 ADCK5Q3MIX3 580 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 EPHA10Q5JZY3 1008 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 CCDC158Q5M9N0 1113 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 ZSCAN25Q6NSZ9 544 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 DDX19AQ9NUU7 478 aaKnown RBP8.48□□□□□ -1.05
SPIDR-228ENST00000588781 PAG1Q9NWQ8 432 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 CEP126Q9P2H0 1117 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 DBNLQ9UJU6 430 aaKnown RBP8.48□□□□□ -1.05
SPIDR-228ENST00000588781 CFAP45Q9UL16 551 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 CNPY2Q9Y2B0 182 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 ZKSCAN5Q9Y2L8 839 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 SOS2Q07890 1332 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-228ENST00000588781 UBR2Q8IWV8 1755 aa8.48□□□□□ -1.05
SPIDR-228ENST00000588781 PAPPAQ13219 1627 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 TNS2Q63HR2 1409 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 COL5A2P05997 1499 aaPredicted RBP8.47□□□□□ -1.05
SPIDR-228ENST00000588781 BCL9LQ86UU0 1499 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 H3BQV1 296 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 OFD1O75665 1012 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 STARD3NLO95772 234 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 CCDC57Q2TAC2 916 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 TAF7LQ5H9L4 462 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 GORABQ5T7V8 394 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 IFFO2Q5TF58 517 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 RGS22Q8NE09 1264 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 DNAJC2Q99543 621 aaKnown RBP8.47□□□□□ -1.05
SPIDR-228ENST00000588781 TLR7Q9NYK1 1049 aaKnown RBP8.47□□□□□ -1.05
SPIDR-228ENST00000588781 TMOD3Q9NYL9 352 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 TPCN1Q9ULQ1 816 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 BRWD3Q6RI45 1802 aa8.47□□□□□ -1.05
SPIDR-228ENST00000588781 COL22A1Q8NFW1 1626 aaPredicted RBP8.47□□□□□ -1.05
SPIDR-228ENST00000588781 ATP5J2-PTCD1G3V325 749 aa8.46□□□□□ -1.06
SPIDR-228ENST00000588781 RNF113AO15541 343 aaKnown RBP8.46□□□□□ -1.06
SPIDR-228ENST00000588781 DHX16O60231 1041 aaKnown RBP8.46□□□□□ -1.06
SPIDR-228ENST00000588781 PTCD1O75127 700 aaKnown RBP8.46□□□□□ -1.06
SPIDR-228ENST00000588781 GADD45BO75293 160 aaPredicted RBP8.46□□□□□ -1.06
SPIDR-228ENST00000588781 IFIT1P09914 478 aaKnown RBP8.46□□□□□ -1.06
SPIDR-228ENST00000588781 FOXO4P98177 505 aa8.46□□□□□ -1.06
SPIDR-228ENST00000588781 NAA16Q6N069 864 aaPredicted RBP8.46□□□□□ -1.06
SPIDR-228ENST00000588781 DHX32Q7L7V1 743 aaKnown RBP8.46□□□□□ -1.06
SPIDR-228ENST00000588781 DEFB132Q7Z7B7 95 aa8.46□□□□□ -1.06
SPIDR-228ENST00000588781 CABLES1Q8TDN4 633 aa8.46□□□□□ -1.06
SPIDR-228ENST00000588781 DDX17Q92841 729 aaKnown RBP8.46□□□□□ -1.06
SPIDR-228ENST00000588781 GTF3C6Q969F1 213 aa8.46□□□□□ -1.06
SPIDR-228ENST00000588781 ZNF396Q96N95 335 aaPredicted RBP8.46□□□□□ -1.06
SPIDR-228ENST00000588781 NEUROD6Q96NK8 337 aa8.46□□□□□ -1.06
SPIDR-228ENST00000588781 DBNDD2Q9BQY9 259 aa8.46□□□□□ -1.06
SPIDR-228ENST00000588781 PLA2G12BQ9BX93 195 aa8.46□□□□□ -1.06
SPIDR-228ENST00000588781 NUP188Q5SRE5 1749 aa8.46□□□□□ -1.06
SPIDR-228ENST00000588781 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.46□□□□□ -1.06
SPIDR-228ENST00000588781 ZNF609O15014 1411 aa8.46□□□□□ -1.06
SPIDR-228ENST00000588781 KCPQ6ZWJ8 1503 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 GLI3P10071 1580 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 CTAGE5O15320 804 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 PFKFB2O60825 505 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 LARGE1O95461 756 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 PCCAP05165 728 aaPredicted RBP8.45□□□□□ -1.06
SPIDR-228ENST00000588781 CPA1P15085 419 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 DNM1Q05193 864 aaKnown RBP8.45□□□□□ -1.06
SPIDR-228ENST00000588781 TCIRG1Q13488 830 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 TOB2Q14106 344 aaPredicted RBP8.45□□□□□ -1.06
SPIDR-228ENST00000588781 MAP3K11Q16584 847 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 TTC39AQ5SRH9 613 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 ZMYM1Q5SVZ6 1142 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 KLHDC4Q8TBB5 520 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 SPATA32Q96LK8 384 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 ISCA1Q9BUE6 129 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.45□□□□□ -1.06
SPIDR-228ENST00000588781 NUP62CLQ9H1M0 184 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 GDPD2Q9HCC8 539 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 USP25Q9UHP3 1055 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 NSFL1CQ9UNZ2 370 aaKnown RBP8.45□□□□□ -1.06
SPIDR-228ENST00000588781 CDHR2Q9BYE9 1310 aa8.45□□□□□ -1.06
SPIDR-228ENST00000588781 NBPF26B4DH59 902 aa8.44□□□□□ -1.06
SPIDR-228ENST00000588781 GOLIM4O00461 696 aa8.44□□□□□ -1.06
SPIDR-228ENST00000588781 IFIT5Q13325 482 aaKnown RBP8.44□□□□□ -1.06
SPIDR-228ENST00000588781 TTF1Q15361 905 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-228ENST00000588781 IMMTQ16891 758 aaKnown RBP8.44□□□□□ -1.06
SPIDR-228ENST00000588781 FOXD4L6Q3SYB3 417 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-228ENST00000588781 NBPF14Q5TI25 921 aa8.44□□□□□ -1.06
SPIDR-228ENST00000588781 NBPF10Q6P3W6 841 aaKnown RBP8.44□□□□□ -1.06
SPIDR-228ENST00000588781 FOXD4L3Q6VB84 417 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-228ENST00000588781 Q6ZUG5 572 aa8.44□□□□□ -1.06
SPIDR-228ENST00000588781 ATG9AQ7Z3C6 839 aa8.44□□□□□ -1.06
SPIDR-228ENST00000588781 ZNF589Q86UQ0 364 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-228ENST00000588781 FBXL16Q8N461 479 aa8.44□□□□□ -1.06
SPIDR-228ENST00000588781 NBPF15Q8N660 670 aa8.44□□□□□ -1.06
SPIDR-228ENST00000588781 NECAB1Q8N987 351 aa8.44□□□□□ -1.06
SPIDR-228ENST00000588781 RNF214Q8ND24 703 aa8.44□□□□□ -1.06
SPIDR-228ENST00000588781 ZNF274Q96GC6 653 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-228ENST00000588781 GJD4Q96KN9 370 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-228ENST00000588781 WDR19Q8NEZ3 1342 aa8.44□□□□□ -1.06
SPIDR-228ENST00000588781 A0A1B0GUL7 405 aa8.43□□□□□ -1.06
SPIDR-228ENST00000588781 KDM4AO75164 1064 aa8.43□□□□□ -1.06
SPIDR-228ENST00000588781 YY1P25490 414 aa8.43□□□□□ -1.06
SPIDR-228ENST00000588781 SASS6Q6UVJ0 657 aa8.43□□□□□ -1.06
SPIDR-228ENST00000588781 TTLL7Q6ZT98 887 aa8.43□□□□□ -1.06
SPIDR-228ENST00000588781 DDX46Q7L014 1031 aaKnown RBP8.43□□□□□ -1.06
SPIDR-228ENST00000588781 ZBTB38Q8NAP3 1195 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms