RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZIC5Q96T25 663 aa23.92■■□□□ 1.42
CCDC43-204ENST00000588687 PRKRIP1Q9H875 184 aaPredicted RBP23.92■■□□□ 1.42
CCDC43-204ENST00000588687 SEC31BQ9NQW1 1179 aa23.92■■□□□ 1.42
CCDC43-204ENST00000588687 CASP8AP2Q9UKL3 1982 aa23.91■■□□□ 1.42
CCDC43-204ENST00000588687 C6orf229H3BNL8 230 aa23.91■■□□□ 1.42
CCDC43-204ENST00000588687 CA12O43570 354 aa23.91■■□□□ 1.42
CCDC43-204ENST00000588687 DOK7Q18PE1 504 aa23.91■■□□□ 1.42
CCDC43-204ENST00000588687 TBC1D10BQ4KMP7 808 aaPredicted RBP23.91■■□□□ 1.42
CCDC43-204ENST00000588687 GOLGA2Q08379 1002 aa23.9■■□□□ 1.42
CCDC43-204ENST00000588687 RIC3Q7Z5B4 369 aa23.89■■□□□ 1.41
CCDC43-204ENST00000588687 EYA3Q99504 573 aa23.89■■□□□ 1.41
CCDC43-204ENST00000588687 FAM155AB1AL88 458 aaPredicted RBP23.88■■□□□ 1.41
CCDC43-204ENST00000588687 ADM5C9JUS6 153 aa23.88■■□□□ 1.41
CCDC43-204ENST00000588687 APAF1O14727 1248 aa23.88■■□□□ 1.41
CCDC43-204ENST00000588687 PCCAP05165 728 aaPredicted RBP23.88■■□□□ 1.41
CCDC43-204ENST00000588687 VIL1P09327 827 aaKnown RBP23.88■■□□□ 1.41
CCDC43-204ENST00000588687 HUNKP57058 714 aa23.88■■□□□ 1.41
CCDC43-204ENST00000588687 KRT26Q7Z3Y9 468 aa23.88■■□□□ 1.41
CCDC43-204ENST00000588687 MYD88Q99836 296 aa23.88■■□□□ 1.41
CCDC43-204ENST00000588687 MYH3P11055 1940 aa23.88■■□□□ 1.41
CCDC43-204ENST00000588687 SPEF2Q9C093 1822 aa23.87■■□□□ 1.41
CCDC43-204ENST00000588687 TNRC18O15417 2968 aaPredicted RBP23.87■■□□□ 1.41
CCDC43-204ENST00000588687 NOGQ13253 232 aa23.87■■□□□ 1.41
CCDC43-204ENST00000588687 C8orf58Q8NAV2 365 aa23.87■■□□□ 1.41
CCDC43-204ENST00000588687 CCDC191Q8NCU4 936 aa23.87■■□□□ 1.41
CCDC43-204ENST00000588687 ASTN2O75129 1339 aaPredicted RBP23.86■■□□□ 1.41
CCDC43-204ENST00000588687 ELL2O00472 640 aaPredicted RBP23.86■■□□□ 1.41
CCDC43-204ENST00000588687 UFL1O94874 794 aa23.86■■□□□ 1.41
CCDC43-204ENST00000588687 GNAI1P63096 354 aa23.86■■□□□ 1.41
CCDC43-204ENST00000588687 KIF4BQ2VIQ3 1234 aa23.86■■□□□ 1.41
CCDC43-204ENST00000588687 GBA2Q9HCG7 927 aaPredicted RBP23.85■■□□□ 1.41
CCDC43-204ENST00000588687 PDE8AO60658 829 aa23.84■■□□□ 1.41
CCDC43-204ENST00000588687 ZNF280AP59817 542 aaPredicted RBP23.84■■□□□ 1.41
CCDC43-204ENST00000588687 FAM161AQ3B820 660 aa23.84■■□□□ 1.41
CCDC43-204ENST00000588687 METTL22Q9BUU2 404 aaPredicted RBP23.84■■□□□ 1.41
CCDC43-204ENST00000588687 ZC3H12CQ9C0D7 883 aaKnown RBP23.84■■□□□ 1.41
CCDC43-204ENST00000588687 CWC25Q9NXE8 425 aaPredicted RBP23.84■■□□□ 1.41
CCDC43-204ENST00000588687 GGA3Q9NZ52 723 aa23.84■■□□□ 1.41
CCDC43-204ENST00000588687 CCDC152Q4G0S7 254 aa23.83■■□□□ 1.41
CCDC43-204ENST00000588687 JARID2Q92833 1246 aaPredicted RBP23.83■■□□□ 1.41
CCDC43-204ENST00000588687 GMLQ99445 158 aa23.83■■□□□ 1.41
CCDC43-204ENST00000588687 GGA1Q9UJY5 639 aa23.83■■□□□ 1.41
CCDC43-204ENST00000588687 HSP90B1P14625 803 aaKnown RBP23.82■■□□□ 1.4
CCDC43-204ENST00000588687 RGS19P49795 217 aa23.82■■□□□ 1.4
CCDC43-204ENST00000588687 CALD1Q05682 793 aaKnown RBP23.82■■□□□ 1.4
CCDC43-204ENST00000588687 RBM26Q5T8P6 1007 aaKnown RBP23.82■■□□□ 1.4
CCDC43-204ENST00000588687 RGMBQ6NW40 437 aa23.82■■□□□ 1.4
CCDC43-204ENST00000588687 TSPYL6Q8N831 410 aa23.82■■□□□ 1.4
CCDC43-204ENST00000588687 DCPSQ96C86 337 aaKnown RBP23.82■■□□□ 1.4
CCDC43-204ENST00000588687 MCOLN1Q9GZU1 580 aa23.82■■□□□ 1.4
CCDC43-204ENST00000588687 ANKIB1Q9P2G1 1089 aa23.82■■□□□ 1.4
CCDC43-204ENST00000588687 PAPPA2Q9BXP8 1791 aa23.81■■□□□ 1.4
CCDC43-204ENST00000588687 IGKV5-2P06315 115 aa23.81■■□□□ 1.4
CCDC43-204ENST00000588687 RSBN1LQ6PCB5 846 aaPredicted RBP23.81■■□□□ 1.4
CCDC43-204ENST00000588687 CCDC85AQ96PX6 553 aaPredicted RBP23.81■■□□□ 1.4
CCDC43-204ENST00000588687 XDHP47989 1333 aa23.81■■□□□ 1.4
CCDC43-204ENST00000588687 AGBL3Q8NEM8 1001 aa23.8■■□□□ 1.4
CCDC43-204ENST00000588687 WTIPA6NIX2 430 aaPredicted RBP23.79■■□□□ 1.4
CCDC43-204ENST00000588687 CCDC85CA6NKD9 419 aa23.79■■□□□ 1.4
CCDC43-204ENST00000588687 CTSWP56202 376 aa23.79■■□□□ 1.4
CCDC43-204ENST00000588687 MAP3K2Q9Y2U5 619 aa23.79■■□□□ 1.4
CCDC43-204ENST00000588687 SLC10A3P09131 477 aa23.78■■□□□ 1.4
CCDC43-204ENST00000588687 CCDC30Q5VVM6 783 aa23.78■■□□□ 1.4
CCDC43-204ENST00000588687 C2orf69Q8N8R5 385 aa23.78■■□□□ 1.4
CCDC43-204ENST00000588687 CDCA5Q96FF9 252 aa23.78■■□□□ 1.4
CCDC43-204ENST00000588687 SAGE1Q9NXZ1 904 aa23.78■■□□□ 1.4
CCDC43-204ENST00000588687 AKAP11Q9UKA4 1901 aa23.78■■□□□ 1.4
CCDC43-204ENST00000588687 MED23Q9ULK4 1368 aa23.78■■□□□ 1.4
CCDC43-204ENST00000588687 ANKRD18AQ8IVF6 992 aa23.77■■□□□ 1.4
CCDC43-204ENST00000588687 SULF1Q8IWU6 871 aa23.77■■□□□ 1.4
CCDC43-204ENST00000588687 DDX58O95786 925 aaKnown RBP23.76■■□□□ 1.39
CCDC43-204ENST00000588687 ANGEL2Q5VTE6 544 aaKnown RBP23.76■■□□□ 1.39
CCDC43-204ENST00000588687 KSR2Q6VAB6 950 aa23.76■■□□□ 1.39
CCDC43-204ENST00000588687 TTLL11Q8NHH1 800 aa23.76■■□□□ 1.39
CCDC43-204ENST00000588687 CCDC102AQ96A19 550 aa23.76■■□□□ 1.39
CCDC43-204ENST00000588687 PI4KAP2A4QPH2 592 aa23.75■■□□□ 1.39
CCDC43-204ENST00000588687 KIF23Q02241 960 aaPredicted RBP23.75■■□□□ 1.39
CCDC43-204ENST00000588687 SCARF1Q14162 830 aa23.75■■□□□ 1.39
CCDC43-204ENST00000588687 PI4KAP1Q8N8J0 262 aa23.75■■□□□ 1.39
CCDC43-204ENST00000588687 TSR2Q969E8 191 aaKnown RBP23.75■■□□□ 1.39
CCDC43-204ENST00000588687 GREM2Q9H772 168 aa23.75■■□□□ 1.39
CCDC43-204ENST00000588687 PITPNM2Q9BZ72 1349 aa23.75■■□□□ 1.39
CCDC43-204ENST00000588687 ATP2B4P23634 1241 aa23.74■■□□□ 1.39
CCDC43-204ENST00000588687 ZNF157P51786 506 aaPredicted RBP23.74■■□□□ 1.39
CCDC43-204ENST00000588687 PODNQ7Z5L7 613 aa23.74■■□□□ 1.39
CCDC43-204ENST00000588687 MYOZ2Q9NPC6 264 aa23.74■■□□□ 1.39
CCDC43-204ENST00000588687 MINPP1Q9UNW1 487 aa23.74■■□□□ 1.39
CCDC43-204ENST00000588687 A0A1B0GUL6 1792 aa23.73■■□□□ 1.39
CCDC43-204ENST00000588687 USP17L3A6NCW0 530 aa23.73■■□□□ 1.39
CCDC43-204ENST00000588687 USP17L4A6NCW7 530 aa23.73■■□□□ 1.39
CCDC43-204ENST00000588687 USP17L8P0C7I0 530 aa23.73■■□□□ 1.39
CCDC43-204ENST00000588687 DGKZQ13574 1117 aa23.73■■□□□ 1.39
CCDC43-204ENST00000588687 CWF19L2Q2TBE0 894 aaKnown RBP23.73■■□□□ 1.39
CCDC43-204ENST00000588687 USP17L1Q7RTZ2 530 aa23.73■■□□□ 1.39
CCDC43-204ENST00000588687 RASAL3Q86YV0 1011 aa23.73■■□□□ 1.39
CCDC43-204ENST00000588687 CDC5LQ99459 802 aaKnown RBP23.73■■□□□ 1.39
CCDC43-204ENST00000588687 BSDC1Q9NW68 430 aaPredicted RBP23.73■■□□□ 1.39
CCDC43-204ENST00000588687 NEURL1BA8MQ27 555 aa23.72■■□□□ 1.39
CCDC43-204ENST00000588687 G3V3G9 751 aa23.72■■□□□ 1.39
CCDC43-204ENST00000588687 MLLT1Q03111 559 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms