RNA–Protein interactions for RNA: ENST00000588550.1

LINC00484-206, long intergenic non-protein coding RNA 484, human

Gene LINC00484, Length 834 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00484-206	ENST00000588550	NOM1	Q5C9Z4	860 aa	Known RBP	13.84	□□□□□ -0.19
LINC00484-206	ENST00000588550	COPS6	Q7L5N1	327 aa		13.84	□□□□□ -0.19
LINC00484-206	ENST00000588550	XAGE3	Q8WTP9	111 aa		13.84	□□□□□ -0.19
LINC00484-206	ENST00000588550	TSPYL4	Q9UJ04	414 aa		13.84	□□□□□ -0.19
LINC00484-206	ENST00000588550	LAMB2	P55268	1798 aa		13.83	□□□□□ -0.19
LINC00484-206	ENST00000588550	PAPPA2	Q9BXP8	1791 aa		13.83	□□□□□ -0.19
LINC00484-206	ENST00000588550	ZNF280A	P59817	542 aa	Predicted RBP	13.83	□□□□□ -0.2
LINC00484-206	ENST00000588550	NFE2L2	Q16236	605 aa		13.83	□□□□□ -0.2
LINC00484-206	ENST00000588550	MOB2	Q70IA6	237 aa		13.83	□□□□□ -0.2
LINC00484-206	ENST00000588550	TBC1D16	Q8TBP0	767 aa		13.83	□□□□□ -0.2
LINC00484-206	ENST00000588550	AKAP11	Q9UKA4	1901 aa		13.82	□□□□□ -0.2
LINC00484-206	ENST00000588550		G3V3G9	751 aa		13.82	□□□□□ -0.2
LINC00484-206	ENST00000588550	SF3B3	Q15393	1217 aa	Known RBP	13.82	□□□□□ -0.2
LINC00484-206	ENST00000588550	DCAF8	Q5TAQ9	597 aa		13.82	□□□□□ -0.2
LINC00484-206	ENST00000588550	ZNF428	Q96B54	188 aa		13.82	□□□□□ -0.2
LINC00484-206	ENST00000588550	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.82	□□□□□ -0.2
LINC00484-206	ENST00000588550	PITPNM2	Q9BZ72	1349 aa		13.82	□□□□□ -0.2
LINC00484-206	ENST00000588550	ZNF609	O15014	1411 aa		13.81	□□□□□ -0.2
LINC00484-206	ENST00000588550	UBE2Q2L	H0YL09	131 aa		13.81	□□□□□ -0.2
LINC00484-206	ENST00000588550	FKTN	O75072	461 aa		13.81	□□□□□ -0.2
LINC00484-206	ENST00000588550	TM4SF4	P48230	202 aa		13.81	□□□□□ -0.2
LINC00484-206	ENST00000588550	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.81	□□□□□ -0.2
LINC00484-206	ENST00000588550	AGBL3	Q8NEM8	1001 aa		13.81	□□□□□ -0.2
LINC00484-206	ENST00000588550	PLEKHF1	Q96S99	279 aa		13.81	□□□□□ -0.2
LINC00484-206	ENST00000588550	SREBF2	Q12772	1141 aa		13.8	□□□□□ -0.2
LINC00484-206	ENST00000588550	TTLL12	Q14166	644 aa	Predicted RBP	13.8	□□□□□ -0.2
LINC00484-206	ENST00000588550	NECTIN2	Q92692	538 aa		13.8	□□□□□ -0.2
LINC00484-206	ENST00000588550	FAM89A	Q96GI7	184 aa		13.8	□□□□□ -0.2
LINC00484-206	ENST00000588550	MYOZ2	Q9NPC6	264 aa		13.8	□□□□□ -0.2
LINC00484-206	ENST00000588550	DDX60	Q8IY21	1712 aa	Known RBP	13.8	□□□□□ -0.2
LINC00484-206	ENST00000588550	UFL1	O94874	794 aa		13.79	□□□□□ -0.2
LINC00484-206	ENST00000588550	USP17L8	P0C7I0	530 aa		13.79	□□□□□ -0.2
LINC00484-206	ENST00000588550	RPS8	P62241	208 aa	Known RBP	13.79	□□□□□ -0.2
LINC00484-206	ENST00000588550	MKRN3	Q13064	507 aa	Known RBP	13.79	□□□□□ -0.2
LINC00484-206	ENST00000588550	CFHR5	Q9BXR6	569 aa		13.79	□□□□□ -0.2
LINC00484-206	ENST00000588550	PODXL2	Q9NZ53	605 aa		13.79	□□□□□ -0.2
LINC00484-206	ENST00000588550	SCAF8	Q9UPN6	1271 aa	Known RBP	13.79	□□□□□ -0.2
LINC00484-206	ENST00000588550	MAPK8IP3	Q9UPT6	1336 aa		13.79	□□□□□ -0.2
LINC00484-206	ENST00000588550	COL4A1	P02462	1669 aa		13.79	□□□□□ -0.2
LINC00484-206	ENST00000588550	PRAMEF18	Q5VWM3	479 aa		13.78	□□□□□ -0.2
LINC00484-206	ENST00000588550	GGA1	Q9UJY5	639 aa		13.78	□□□□□ -0.2
LINC00484-206	ENST00000588550	POTEF	A5A3E0	1075 aa		13.77	□□□□□ -0.21
LINC00484-206	ENST00000588550	NF2	P35240	595 aa		13.77	□□□□□ -0.21
LINC00484-206	ENST00000588550	RTL5	Q5HYW3	569 aa	Predicted RBP	13.77	□□□□□ -0.21
LINC00484-206	ENST00000588550	INTS3	Q68E01	1043 aa	Known RBP	13.77	□□□□□ -0.21
LINC00484-206	ENST00000588550	CCER1	Q8TC90	406 aa	Predicted RBP	13.77	□□□□□ -0.21
LINC00484-206	ENST00000588550	GML	Q99445	158 aa		13.77	□□□□□ -0.21
LINC00484-206	ENST00000588550	ISCA1	Q9BUE6	129 aa		13.77	□□□□□ -0.21
LINC00484-206	ENST00000588550	R3HDML	Q9H3Y0	253 aa		13.77	□□□□□ -0.21
LINC00484-206	ENST00000588550	BABAM1	Q9NWV8	329 aa		13.77	□□□□□ -0.21
LINC00484-206	ENST00000588550	ANKIB1	Q9P2G1	1089 aa		13.77	□□□□□ -0.21
LINC00484-206	ENST00000588550	FXR1	P51114	621 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
LINC00484-206	ENST00000588550	PLBD2	Q8NHP8	589 aa		13.76	□□□□□ -0.21
LINC00484-206	ENST00000588550	TRIM17	Q9Y577	477 aa		13.76	□□□□□ -0.21
LINC00484-206	ENST00000588550	TAF1	P21675	1872 aa		13.76	□□□□□ -0.21
LINC00484-206	ENST00000588550	ATP5J2-PTCD1	G3V325	749 aa		13.75	□□□□□ -0.21
LINC00484-206	ENST00000588550	IRS4	O14654	1257 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC00484-206	ENST00000588550	ALDH1A1	P00352	501 aa		13.75	□□□□□ -0.21
LINC00484-206	ENST00000588550	NBPF9	Q3BBW0	867 aa		13.75	□□□□□ -0.21
LINC00484-206	ENST00000588550	PNN	Q9H307	717 aa	Known RBP	13.75	□□□□□ -0.21
LINC00484-206	ENST00000588550	CHPF2	Q9P2E5	772 aa		13.75	□□□□□ -0.21
LINC00484-206	ENST00000588550	DLG5	Q8TDM6	1919 aa		13.74	□□□□□ -0.21
LINC00484-206	ENST00000588550	USP17L3	A6NCW0	530 aa		13.74	□□□□□ -0.21
LINC00484-206	ENST00000588550	USP17L4	A6NCW7	530 aa		13.74	□□□□□ -0.21
LINC00484-206	ENST00000588550	ANKRD13D	Q6ZTN6	518 aa		13.74	□□□□□ -0.21
LINC00484-206	ENST00000588550	OTOP1	Q7RTM1	612 aa		13.74	□□□□□ -0.21
LINC00484-206	ENST00000588550	USP17L1	Q7RTZ2	530 aa		13.74	□□□□□ -0.21
LINC00484-206	ENST00000588550	ARMC9	Q7Z3E5	817 aa		13.74	□□□□□ -0.21
LINC00484-206	ENST00000588550	SEC31B	Q9NQW1	1179 aa		13.74	□□□□□ -0.21
LINC00484-206	ENST00000588550	POLR2A	P24928	1970 aa	Known RBP	13.73	□□□□□ -0.21
LINC00484-206	ENST00000588550	SCN9A	Q15858	1988 aa		13.73	□□□□□ -0.21
LINC00484-206	ENST00000588550	PTPN12	Q05209	780 aa	Known RBP	13.73	□□□□□ -0.21
LINC00484-206	ENST00000588550	SPRYD7	Q5W111	196 aa		13.73	□□□□□ -0.21
LINC00484-206	ENST00000588550	PODN	Q7Z5L7	613 aa		13.73	□□□□□ -0.21
LINC00484-206	ENST00000588550	WNT10B	O00744	389 aa		13.72	□□□□□ -0.21
LINC00484-206	ENST00000588550	RIPK4	P57078	832 aa		13.72	□□□□□ -0.21
LINC00484-206	ENST00000588550	PRKG1	Q13976	671 aa		13.72	□□□□□ -0.21
LINC00484-206	ENST00000588550	KRT24	Q2M2I5	525 aa		13.72	□□□□□ -0.21
LINC00484-206	ENST00000588550	OGFOD1	Q8N543	542 aa		13.72	□□□□□ -0.21
LINC00484-206	ENST00000588550	XDH	P47989	1333 aa		13.71	□□□□□ -0.21
LINC00484-206	ENST00000588550	MANSC4	A6NHS7	340 aa	Predicted RBP	13.71	□□□□□ -0.21
LINC00484-206	ENST00000588550	HSP90B1	P14625	803 aa	Known RBP	13.71	□□□□□ -0.21
LINC00484-206	ENST00000588550	LMOD3	Q0VAK6	560 aa		13.71	□□□□□ -0.21
LINC00484-206	ENST00000588550	TRIM28	Q13263	835 aa	Known RBP	13.71	□□□□□ -0.21
LINC00484-206	ENST00000588550	HDGFL1	Q5TGJ6	251 aa		13.71	□□□□□ -0.21
LINC00484-206	ENST00000588550	IFNL1	Q8IU54	200 aa		13.71	□□□□□ -0.21
LINC00484-206	ENST00000588550	SASH1	O94885	1247 aa		13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	EN2	P19622	333 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	ATP2B4	P23634	1241 aa		13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	INHBE	P58166	350 aa		13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	CCDC152	Q4G0S7	254 aa		13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	DACT2	Q5SW24	774 aa		13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	LDLRAD1	Q5T700	205 aa		13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	FBXW7	Q969H0	707 aa		13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	ARMC5	Q96C12	935 aa		13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	ERO1A	Q96HE7	468 aa		13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	ANGEL1	Q9UNK9	670 aa	Known RBP	13.7	□□□□□ -0.22
LINC00484-206	ENST00000588550	COLQ	Q9Y215	455 aa	Predicted RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 65 ms