RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 BEND3Q5T5X7 828 aa11.23□□□□□ -0.61
SDF2-207ENST00000588472 MRPL50Q8N5N7 158 aaKnown RBP11.23□□□□□ -0.61
SDF2-207ENST00000588472 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
SDF2-207ENST00000588472 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
SDF2-207ENST00000588472 CDC5LQ99459 802 aaKnown RBP11.23□□□□□ -0.61
SDF2-207ENST00000588472 DBNDD1Q9H9R9 158 aa11.23□□□□□ -0.61
SDF2-207ENST00000588472 C9orf78Q9NZ63 289 aaPredicted RBP11.23□□□□□ -0.61
SDF2-207ENST00000588472 SLC34A2O95436 690 aa11.22□□□□□ -0.61
SDF2-207ENST00000588472 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
SDF2-207ENST00000588472 TBC1D16Q8TBP0 767 aa11.22□□□□□ -0.61
SDF2-207ENST00000588472 EYA3Q99504 573 aa11.22□□□□□ -0.61
SDF2-207ENST00000588472 ZC3H12CQ9C0D7 883 aaKnown RBP11.22□□□□□ -0.61
SDF2-207ENST00000588472 VPS33BQ9H267 617 aa11.22□□□□□ -0.61
SDF2-207ENST00000588472 GGA1Q9UJY5 639 aa11.22□□□□□ -0.61
SDF2-207ENST00000588472 ITGA6P23229 1130 aa11.21□□□□□ -0.61
SDF2-207ENST00000588472 IGHMBP2P38935 993 aaKnown RBP11.21□□□□□ -0.61
SDF2-207ENST00000588472 EPS15P42566 896 aa11.21□□□□□ -0.61
SDF2-207ENST00000588472 CASP7P55210 303 aa11.21□□□□□ -0.61
SDF2-207ENST00000588472 CIAPIN1Q6FI81 312 aa11.21□□□□□ -0.61
SDF2-207ENST00000588472 LDHDQ86WU2 507 aa11.21□□□□□ -0.61
SDF2-207ENST00000588472 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
SDF2-207ENST00000588472 SMC4Q9NTJ3 1288 aa11.21□□□□□ -0.61
SDF2-207ENST00000588472 CACNA1FO60840 1977 aa11.21□□□□□ -0.62
SDF2-207ENST00000588472 WTIPA6NIX2 430 aaPredicted RBP11.2□□□□□ -0.62
SDF2-207ENST00000588472 TMEM88BA6NKF7 163 aa11.2□□□□□ -0.62
SDF2-207ENST00000588472 YDJCA8MPS7 323 aa11.2□□□□□ -0.62
SDF2-207ENST00000588472 GRM8O00222 908 aa11.2□□□□□ -0.62
SDF2-207ENST00000588472 ECE2O60344 883 aa11.2□□□□□ -0.62
SDF2-207ENST00000588472 GMPSP49915 693 aaPredicted RBP11.2□□□□□ -0.62
SDF2-207ENST00000588472 SCNN1DP51172 638 aa11.2□□□□□ -0.62
SDF2-207ENST00000588472 HNRNPUQ00839 825 aaKnown RBP eCLIP11.2□□□□□ -0.62
SDF2-207ENST00000588472 TNIP1Q15025 636 aa11.2□□□□□ -0.62
SDF2-207ENST00000588472 MPHOSPH8Q99549 860 aa11.2□□□□□ -0.62
SDF2-207ENST00000588472 KCNQ5Q9NR82 932 aa11.2□□□□□ -0.62
SDF2-207ENST00000588472 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
SDF2-207ENST00000588472 XDHP47989 1333 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 PASKQ96RG2 1323 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 ANKRD18BA2A2Z9 1011 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 VEGFBP49765 207 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 FOXO4P98177 505 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 IFIT5Q13325 482 aaKnown RBP11.19□□□□□ -0.62
SDF2-207ENST00000588472 TAF7LQ5H9L4 462 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 EPHA10Q5JZY3 1008 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 MAP1SQ66K74 1059 aaPredicted RBP11.19□□□□□ -0.62
SDF2-207ENST00000588472 LMBR1LQ6UX01 489 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 PNMA8AQ86V59 439 aaPredicted RBP11.19□□□□□ -0.62
SDF2-207ENST00000588472 TRMT2AQ8IZ69 625 aaKnown RBP11.19□□□□□ -0.62
SDF2-207ENST00000588472 PLA2G12BQ9BX93 195 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 BSDC1Q9NW68 430 aaPredicted RBP11.19□□□□□ -0.62
SDF2-207ENST00000588472 MINPP1Q9UNW1 487 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 DUOX1Q9NRD9 1551 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 SPEF2Q9C093 1822 aa11.19□□□□□ -0.62
SDF2-207ENST00000588472 LRRC37AA6NMS7 1700 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 PTPRCP08575 1304 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 PSMD14O00487 310 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 PLIN1O60240 522 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 ALDH1L1O75891 902 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 CSF1RP07333 972 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 ATP2B4P23634 1241 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 KCNJ4P48050 445 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 LBX1P52954 281 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 FBXW7Q969H0 707 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 ZNF594Q96JF6 807 aaPredicted RBP11.18□□□□□ -0.62
SDF2-207ENST00000588472 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 PODXL2Q9NZ53 605 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 GPRC5DQ9NZD1 345 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 NOB1Q9ULX3 412 aaKnown RBP11.18□□□□□ -0.62
SDF2-207ENST00000588472 SCN4AP35499 1836 aa11.18□□□□□ -0.62
SDF2-207ENST00000588472 MYH3P11055 1940 aa11.17□□□□□ -0.62
SDF2-207ENST00000588472 RTL9Q8NET4 1388 aa11.17□□□□□ -0.62
SDF2-207ENST00000588472 SHTN1A0MZ66 631 aa11.17□□□□□ -0.62
SDF2-207ENST00000588472 NBPF7P0C2Y1 421 aaPredicted RBP11.17□□□□□ -0.62
SDF2-207ENST00000588472 CCDC57Q2TAC2 916 aa11.17□□□□□ -0.62
SDF2-207ENST00000588472 ALDH1L2Q3SY69 923 aa11.17□□□□□ -0.62
SDF2-207ENST00000588472 RBM26Q5T8P6 1007 aaKnown RBP11.17□□□□□ -0.62
SDF2-207ENST00000588472 CNTROBQ8N137 903 aa11.17□□□□□ -0.62
SDF2-207ENST00000588472 HELBQ8NG08 1087 aaPredicted RBP11.17□□□□□ -0.62
SDF2-207ENST00000588472 ABHD8Q96I13 439 aa11.17□□□□□ -0.62
SDF2-207ENST00000588472 SUCLG2Q96I99 432 aa11.17□□□□□ -0.62
SDF2-207ENST00000588472 ADARB2Q9NS39 739 aaKnown RBP11.17□□□□□ -0.62
SDF2-207ENST00000588472 CNOT7Q9UIV1 285 aaKnown RBP11.17□□□□□ -0.62
SDF2-207ENST00000588472 LTBP1Q14766 1721 aa11.16□□□□□ -0.62
SDF2-207ENST00000588472 H7C1D1 291 aa11.16□□□□□ -0.62
SDF2-207ENST00000588472 SNAP23O00161 211 aa11.16□□□□□ -0.62
SDF2-207ENST00000588472 TAF5LO75529 589 aa11.16□□□□□ -0.62
SDF2-207ENST00000588472 CCT4P50991 539 aaKnown RBP11.16□□□□□ -0.62
SDF2-207ENST00000588472 CACNB1Q02641 598 aaPredicted RBP11.16□□□□□ -0.62
SDF2-207ENST00000588472 MAP2K1Q02750 393 aaPredicted RBP11.16□□□□□ -0.62
SDF2-207ENST00000588472 DEFB115Q30KQ5 88 aa11.16□□□□□ -0.62
SDF2-207ENST00000588472 USP50Q70EL3 339 aaPredicted RBP11.16□□□□□ -0.62
SDF2-207ENST00000588472 ANKRD2Q9GZV1 360 aa11.16□□□□□ -0.62
SDF2-207ENST00000588472 CNNM1Q9NRU3 951 aa11.16□□□□□ -0.62
SDF2-207ENST00000588472 ITGBL1O95965 494 aaPredicted RBP11.15□□□□□ -0.62
SDF2-207ENST00000588472 HSPA8P11142 646 aaKnown RBP11.15□□□□□ -0.62
SDF2-207ENST00000588472 CHRNDQ07001 517 aa11.15□□□□□ -0.62
SDF2-207ENST00000588472 LDHAL6AQ6ZMR3 332 aa11.15□□□□□ -0.62
SDF2-207ENST00000588472 SAMD7Q7Z3H4 446 aa11.15□□□□□ -0.62
SDF2-207ENST00000588472 MICALL2Q8IY33 904 aa11.15□□□□□ -0.62
SDF2-207ENST00000588472 ZNF804BA4D1E1 1349 aa11.14□□□□□ -0.63
SDF2-207ENST00000588472 RASSF10A6NK89 507 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms