RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 TNIP1Q15025 636 aa25.48■■□□□ 1.67
TRAPPC6A-203ENST00000587818 MIER1Q8N108 512 aa25.48■■□□□ 1.67
TRAPPC6A-203ENST00000587818 CDC5LQ99459 802 aaKnown RBP25.48■■□□□ 1.67
TRAPPC6A-203ENST00000587818 PLA2G12BQ9BX93 195 aa25.48■■□□□ 1.67
TRAPPC6A-203ENST00000587818 BCL2L13Q9BXK5 485 aa25.48■■□□□ 1.67
TRAPPC6A-203ENST00000587818 ZC3H12CQ9C0D7 883 aaKnown RBP25.48■■□□□ 1.67
TRAPPC6A-203ENST00000587818 PODXL2Q9NZ53 605 aa25.48■■□□□ 1.67
TRAPPC6A-203ENST00000587818 GGA1Q9UJY5 639 aa25.48■■□□□ 1.67
TRAPPC6A-203ENST00000587818 GPRC5DQ9NZD1 345 aa25.47■■□□□ 1.67
TRAPPC6A-203ENST00000587818 ITGBL1O95965 494 aaPredicted RBP25.46■■□□□ 1.67
TRAPPC6A-203ENST00000587818 CSF1RP07333 972 aa25.46■■□□□ 1.67
TRAPPC6A-203ENST00000587818 SSH1Q8WYL5 1049 aa25.46■■□□□ 1.67
TRAPPC6A-203ENST00000587818 MINPP1Q9UNW1 487 aa25.46■■□□□ 1.67
TRAPPC6A-203ENST00000587818 ZBTB12Q9Y330 459 aaPredicted RBP25.46■■□□□ 1.67
TRAPPC6A-203ENST00000587818 SHTN1A0MZ66 631 aa25.45■■□□□ 1.66
TRAPPC6A-203ENST00000587818 ECE2O60344 883 aa25.45■■□□□ 1.66
TRAPPC6A-203ENST00000587818 ITGA6P23229 1130 aa25.45■■□□□ 1.66
TRAPPC6A-203ENST00000587818 FAM161AQ3B820 660 aa25.45■■□□□ 1.66
TRAPPC6A-203ENST00000587818 DIEXFQ68CQ4 756 aaKnown RBP25.45■■□□□ 1.66
TRAPPC6A-203ENST00000587818 CNTROBQ8N137 903 aa25.45■■□□□ 1.66
TRAPPC6A-203ENST00000587818 KLRG1Q96E93 195 aa25.45■■□□□ 1.66
TRAPPC6A-203ENST00000587818 BSDC1Q9NW68 430 aaPredicted RBP25.45■■□□□ 1.66
TRAPPC6A-203ENST00000587818 SPEF2Q9C093 1822 aa25.44■■□□□ 1.66
TRAPPC6A-203ENST00000587818 G3V3G9 751 aa25.44■■□□□ 1.66
TRAPPC6A-203ENST00000587818 PSMD14O00487 310 aa25.44■■□□□ 1.66
TRAPPC6A-203ENST00000587818 FOXO4P98177 505 aa25.44■■□□□ 1.66
TRAPPC6A-203ENST00000587818 EPHA10Q5JZY3 1008 aa25.44■■□□□ 1.66
TRAPPC6A-203ENST00000587818 DCAF8Q5TAQ9 597 aa25.44■■□□□ 1.66
TRAPPC6A-203ENST00000587818 XDHP47989 1333 aa25.43■■□□□ 1.66
TRAPPC6A-203ENST00000587818 IGHMBP2P38935 993 aaKnown RBP25.43■■□□□ 1.66
TRAPPC6A-203ENST00000587818 TRMT2AQ8IZ69 625 aaKnown RBP25.43■■□□□ 1.66
TRAPPC6A-203ENST00000587818 CNOT7Q9UIV1 285 aaKnown RBP25.43■■□□□ 1.66
TRAPPC6A-203ENST00000587818 RTL9Q8NET4 1388 aa25.43■■□□□ 1.66
TRAPPC6A-203ENST00000587818 PASKQ96RG2 1323 aa25.42■■□□□ 1.66
TRAPPC6A-203ENST00000587818 ATP2B4P23634 1241 aa25.42■■□□□ 1.66
TRAPPC6A-203ENST00000587818 FMR1Q06787 632 aaKnown RBP eCLIP25.42■■□□□ 1.66
TRAPPC6A-203ENST00000587818 USP50Q70EL3 339 aaPredicted RBP25.42■■□□□ 1.66
TRAPPC6A-203ENST00000587818 SRCIN1Q9C0H9 1055 aa25.42■■□□□ 1.66
TRAPPC6A-203ENST00000587818 ADARB2Q9NS39 739 aaKnown RBP25.42■■□□□ 1.66
TRAPPC6A-203ENST00000587818 C9orf78Q9NZ63 289 aaPredicted RBP25.42■■□□□ 1.66
TRAPPC6A-203ENST00000587818 CHMP3Q9Y3E7 222 aa25.42■■□□□ 1.66
TRAPPC6A-203ENST00000587818 ADAMTSL1Q8N6G6 1762 aa25.41■■□□□ 1.66
TRAPPC6A-203ENST00000587818 GRM8O00222 908 aa25.41■■□□□ 1.66
TRAPPC6A-203ENST00000587818 ALDH1L1O75891 902 aa25.4■■□□□ 1.66
TRAPPC6A-203ENST00000587818 LMBR1LQ6UX01 489 aa25.4■■□□□ 1.66
TRAPPC6A-203ENST00000587818 ANKRD18BA2A2Z9 1011 aa25.39■■□□□ 1.66
TRAPPC6A-203ENST00000587818 HIRAP54198 1017 aaPredicted RBP25.39■■□□□ 1.66
TRAPPC6A-203ENST00000587818 MPHOSPH8Q99549 860 aa25.39■■□□□ 1.66
TRAPPC6A-203ENST00000587818 CCT4P50991 539 aaKnown RBP25.38■■□□□ 1.65
TRAPPC6A-203ENST00000587818 MICALL2Q8IY33 904 aa25.38■■□□□ 1.65
TRAPPC6A-203ENST00000587818 CREBZFQ9NS37 354 aa25.38■■□□□ 1.65
TRAPPC6A-203ENST00000587818 MKRN1Q9UHC7 482 aaKnown RBP25.38■■□□□ 1.65
TRAPPC6A-203ENST00000587818 SCN9AQ15858 1988 aa25.37■■□□□ 1.65
TRAPPC6A-203ENST00000587818 TRPM4Q8TD43 1214 aa25.37■■□□□ 1.65
TRAPPC6A-203ENST00000587818 ZNF594Q96JF6 807 aaPredicted RBP25.37■■□□□ 1.65
TRAPPC6A-203ENST00000587818 H7C1D1 291 aa25.36■■□□□ 1.65
TRAPPC6A-203ENST00000587818 TRAF5O00463 557 aa25.36■■□□□ 1.65
TRAPPC6A-203ENST00000587818 NBPF7P0C2Y1 421 aaPredicted RBP25.36■■□□□ 1.65
TRAPPC6A-203ENST00000587818 IFIT5Q13325 482 aaKnown RBP25.36■■□□□ 1.65
TRAPPC6A-203ENST00000587818 RBM26Q5T8P6 1007 aaKnown RBP25.36■■□□□ 1.65
TRAPPC6A-203ENST00000587818 SAMD7Q7Z3H4 446 aa25.36■■□□□ 1.65
TRAPPC6A-203ENST00000587818 HELBQ8NG08 1087 aaPredicted RBP25.36■■□□□ 1.65
TRAPPC6A-203ENST00000587818 SUCLG2Q96I99 432 aa25.36■■□□□ 1.65
TRAPPC6A-203ENST00000587818 TMEM88BA6NKF7 163 aa25.35■■□□□ 1.65
TRAPPC6A-203ENST00000587818 TXNRD3Q86VQ6 643 aa25.35■■□□□ 1.65
TRAPPC6A-203ENST00000587818 DPF2Q92785 391 aa25.35■■□□□ 1.65
TRAPPC6A-203ENST00000587818 SMC4Q9NTJ3 1288 aa25.35■■□□□ 1.65
TRAPPC6A-203ENST00000587818 SNAP23O00161 211 aa25.34■■□□□ 1.65
TRAPPC6A-203ENST00000587818 VIL1P09327 827 aaKnown RBP25.34■■□□□ 1.65
TRAPPC6A-203ENST00000587818 CHRNDQ07001 517 aa25.34■■□□□ 1.65
TRAPPC6A-203ENST00000587818 ALDH1L2Q3SY69 923 aa25.34■■□□□ 1.65
TRAPPC6A-203ENST00000587818 TBC1D10BQ4KMP7 808 aaPredicted RBP25.34■■□□□ 1.65
TRAPPC6A-203ENST00000587818 KAZALD1Q96I82 304 aa25.34■■□□□ 1.65
TRAPPC6A-203ENST00000587818 TAF5LO75529 589 aa25.33■■□□□ 1.65
TRAPPC6A-203ENST00000587818 EGFRP00533 1210 aa25.33■■□□□ 1.65
TRAPPC6A-203ENST00000587818 KLRK1P26718 216 aa25.33■■□□□ 1.65
TRAPPC6A-203ENST00000587818 JMYQ8N9B5 988 aa25.33■■□□□ 1.65
TRAPPC6A-203ENST00000587818 ANKRD2Q9GZV1 360 aa25.33■■□□□ 1.65
TRAPPC6A-203ENST00000587818 LEMD3Q9Y2U8 911 aa25.33■■□□□ 1.65
TRAPPC6A-203ENST00000587818 PTPRCP08575 1304 aa25.33■■□□□ 1.64
TRAPPC6A-203ENST00000587818 CCDC57Q2TAC2 916 aa25.32■■□□□ 1.64
TRAPPC6A-203ENST00000587818 ZNF804BA4D1E1 1349 aa25.32■■□□□ 1.64
TRAPPC6A-203ENST00000587818 GLIS2Q9BZE0 524 aaPredicted RBP25.31■■□□□ 1.64
TRAPPC6A-203ENST00000587818 PLIN1O60240 522 aa25.3■■□□□ 1.64
TRAPPC6A-203ENST00000587818 RPS12P25398 132 aaKnown RBP25.3■■□□□ 1.64
TRAPPC6A-203ENST00000587818 TAF7LQ5H9L4 462 aa25.3■■□□□ 1.64
TRAPPC6A-203ENST00000587818 DLK2Q6UY11 383 aa25.3■■□□□ 1.64
TRAPPC6A-203ENST00000587818 PODNQ7Z5L7 613 aa25.3■■□□□ 1.64
TRAPPC6A-203ENST00000587818 MXD3Q9BW11 206 aa25.3■■□□□ 1.64
TRAPPC6A-203ENST00000587818 PGAP2Q9UHJ9 254 aa25.3■■□□□ 1.64
TRAPPC6A-203ENST00000587818 NOB1Q9ULX3 412 aaKnown RBP25.3■■□□□ 1.64
TRAPPC6A-203ENST00000587818 KCNJ4P48050 445 aa25.29■■□□□ 1.64
TRAPPC6A-203ENST00000587818 RSBN1LQ6PCB5 846 aaPredicted RBP25.29■■□□□ 1.64
TRAPPC6A-203ENST00000587818 FBXW7Q969H0 707 aa25.29■■□□□ 1.64
TRAPPC6A-203ENST00000587818 MED23Q9ULK4 1368 aa25.29■■□□□ 1.64
TRAPPC6A-203ENST00000587818 USP17L3A6NCW0 530 aa25.28■■□□□ 1.64
TRAPPC6A-203ENST00000587818 USP17L4A6NCW7 530 aa25.28■■□□□ 1.64
TRAPPC6A-203ENST00000587818 CST9Q5W186 159 aa25.28■■□□□ 1.64
TRAPPC6A-203ENST00000587818 LDHAL6AQ6ZMR3 332 aa25.28■■□□□ 1.64
TRAPPC6A-203ENST00000587818 USP17L1Q7RTZ2 530 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms