RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 MPHOSPH8Q99549 860 aa18.7■□□□□ 0.58
ATG4D-207ENST00000587256 BSDC1Q9NW68 430 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-207ENST00000587256 PODXL2Q9NZ53 605 aa18.7■□□□□ 0.58
ATG4D-207ENST00000587256 POTECB2RU33 542 aa18.69■□□□□ 0.58
ATG4D-207ENST00000587256 NBPF7P0C2Y1 421 aaPredicted RBP18.69■□□□□ 0.58
ATG4D-207ENST00000587256 IFIT5Q13325 482 aaKnown RBP18.69■□□□□ 0.58
ATG4D-207ENST00000587256 LMBR1LQ6UX01 489 aa18.69■□□□□ 0.58
ATG4D-207ENST00000587256 SCN4AP35499 1836 aa18.69■□□□□ 0.58
ATG4D-207ENST00000587256 LMOD1P29536 600 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-207ENST00000587256 BRPF1P55201 1214 aaPredicted RBP18.68■□□□□ 0.58
ATG4D-207ENST00000587256 EPHA10Q5JZY3 1008 aa18.68■□□□□ 0.58
ATG4D-207ENST00000587256 SMC1BQ8NDV3 1235 aa18.68■□□□□ 0.58
ATG4D-207ENST00000587256 SUCLG2Q96I99 432 aa18.68■□□□□ 0.58
ATG4D-207ENST00000587256 HACL1Q9UJ83 578 aa18.68■□□□□ 0.58
ATG4D-207ENST00000587256 ATP2B4P23634 1241 aa18.67■□□□□ 0.58
ATG4D-207ENST00000587256 CCT4P50991 539 aaKnown RBP18.67■□□□□ 0.58
ATG4D-207ENST00000587256 CCDC57Q2TAC2 916 aa18.67■□□□□ 0.58
ATG4D-207ENST00000587256 TAF7LQ5H9L4 462 aa18.67■□□□□ 0.58
ATG4D-207ENST00000587256 ZC3H12CQ9C0D7 883 aaKnown RBP18.67■□□□□ 0.58
ATG4D-207ENST00000587256 DBNDD1Q9H9R9 158 aa18.67■□□□□ 0.58
ATG4D-207ENST00000587256 MINPP1Q9UNW1 487 aa18.67■□□□□ 0.58
ATG4D-207ENST00000587256 UTYO14607 1347 aa18.67■□□□□ 0.58
ATG4D-207ENST00000587256 G3V3G9 751 aa18.66■□□□□ 0.58
ATG4D-207ENST00000587256 RAD17O75943 681 aa18.66■□□□□ 0.58
ATG4D-207ENST00000587256 CXCL9Q07325 125 aa18.66■□□□□ 0.58
ATG4D-207ENST00000587256 FSTL1Q12841 308 aa18.66■□□□□ 0.58
ATG4D-207ENST00000587256 DCAF8Q5TAQ9 597 aa18.66■□□□□ 0.58
ATG4D-207ENST00000587256 CIAPIN1Q6FI81 312 aa18.66■□□□□ 0.58
ATG4D-207ENST00000587256 TAF1DQ9H5J8 278 aaPredicted RBP18.66■□□□□ 0.58
ATG4D-207ENST00000587256 ECE2O60344 883 aa18.65■□□□□ 0.58
ATG4D-207ENST00000587256 HSPA6P17066 643 aa18.65■□□□□ 0.58
ATG4D-207ENST00000587256 TNIP1Q15025 636 aa18.65■□□□□ 0.58
ATG4D-207ENST00000587256 DOK7Q18PE1 504 aa18.65■□□□□ 0.58
ATG4D-207ENST00000587256 EAPPQ56P03 285 aaPredicted RBP18.65■□□□□ 0.58
ATG4D-207ENST00000587256 FRAT1Q92837 279 aaPredicted RBP18.65■□□□□ 0.58
ATG4D-207ENST00000587256 BICC1Q9H694 974 aaKnown RBP18.65■□□□□ 0.58
ATG4D-207ENST00000587256 YDJCA8MPS7 323 aa18.64■□□□□ 0.57
ATG4D-207ENST00000587256 EPHX2P34913 555 aa18.64■□□□□ 0.57
ATG4D-207ENST00000587256 ANKRD2Q9GZV1 360 aa18.64■□□□□ 0.57
ATG4D-207ENST00000587256 IPO8O15397 1037 aaKnown RBP18.63■□□□□ 0.57
ATG4D-207ENST00000587256 BCAR3O75815 825 aa18.63■□□□□ 0.57
ATG4D-207ENST00000587256 POTEIP0CG38 1075 aa18.63■□□□□ 0.57
ATG4D-207ENST00000587256 POTEJP0CG39 1038 aa18.63■□□□□ 0.57
ATG4D-207ENST00000587256 KCNJ4P48050 445 aa18.63■□□□□ 0.57
ATG4D-207ENST00000587256 SCNN1DP51172 638 aa18.63■□□□□ 0.57
ATG4D-207ENST00000587256 CHRNDQ07001 517 aa18.63■□□□□ 0.57
ATG4D-207ENST00000587256 ARHGAP45Q92619 1136 aa18.63■□□□□ 0.57
ATG4D-207ENST00000587256 KAZALD1Q96I82 304 aa18.63■□□□□ 0.57
ATG4D-207ENST00000587256 USP44Q9H0E7 712 aa18.63■□□□□ 0.57
ATG4D-207ENST00000587256 MED23Q9ULK4 1368 aa18.63■□□□□ 0.57
ATG4D-207ENST00000587256 UBTFL1P0CB47 393 aaPredicted RBP18.62■□□□□ 0.57
ATG4D-207ENST00000587256 GMPSP49915 693 aaPredicted RBP18.62■□□□□ 0.57
ATG4D-207ENST00000587256 PNMA8AQ86V59 439 aaPredicted RBP18.62■□□□□ 0.57
ATG4D-207ENST00000587256 ZNF594Q96JF6 807 aaPredicted RBP18.62■□□□□ 0.57
ATG4D-207ENST00000587256 CNNM1Q9NRU3 951 aa18.62■□□□□ 0.57
ATG4D-207ENST00000587256 RABL6Q3YEC7 729 aaPredicted RBP18.61■□□□□ 0.57
ATG4D-207ENST00000587256 CHADLQ6NUI6 762 aa18.61■□□□□ 0.57
ATG4D-207ENST00000587256 LDHAL6AQ6ZMR3 332 aa18.61■□□□□ 0.57
ATG4D-207ENST00000587256 LDHDQ86WU2 507 aa18.61■□□□□ 0.57
ATG4D-207ENST00000587256 ANKRD44Q8N8A2 993 aa18.61■□□□□ 0.57
ATG4D-207ENST00000587256 CLEC11AQ9Y240 323 aa18.61■□□□□ 0.57
ATG4D-207ENST00000587256 LEMD3Q9Y2U8 911 aa18.61■□□□□ 0.57
ATG4D-207ENST00000587256 A0A1B0GUL6 1792 aa18.6■□□□□ 0.57
ATG4D-207ENST00000587256 ZNF804BA4D1E1 1349 aa18.6■□□□□ 0.57
ATG4D-207ENST00000587256 PSMD14O00487 310 aa18.6■□□□□ 0.57
ATG4D-207ENST00000587256 TRIM27P14373 513 aa18.6■□□□□ 0.57
ATG4D-207ENST00000587256 EPS15P42566 896 aa18.6■□□□□ 0.57
ATG4D-207ENST00000587256 ATF7IPQ6VMQ6 1270 aa18.6■□□□□ 0.57
ATG4D-207ENST00000587256 GPRC5DQ9NZD1 345 aa18.6■□□□□ 0.57
ATG4D-207ENST00000587256 WTIPA6NIX2 430 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-207ENST00000587256 ZKSCAN2Q63HK3 967 aa18.59■□□□□ 0.57
ATG4D-207ENST00000587256 ADAMTSL1Q8N6G6 1762 aa18.58■□□□□ 0.57
ATG4D-207ENST00000587256 TAF5LO75529 589 aa18.58■□□□□ 0.56
ATG4D-207ENST00000587256 APLP1P51693 650 aa18.58■□□□□ 0.56
ATG4D-207ENST00000587256 HELBQ8NG08 1087 aaPredicted RBP18.58■□□□□ 0.56
ATG4D-207ENST00000587256 CLUAP1Q96AJ1 413 aa18.58■□□□□ 0.56
ATG4D-207ENST00000587256 SCN9AQ15858 1988 aa18.57■□□□□ 0.56
ATG4D-207ENST00000587256 KLRK1P26718 216 aa18.57■□□□□ 0.56
ATG4D-207ENST00000587256 INTS3Q68E01 1043 aaKnown RBP18.57■□□□□ 0.56
ATG4D-207ENST00000587256 KCNQ5Q9NR82 932 aa18.57■□□□□ 0.56
ATG4D-207ENST00000587256 ADARB2Q9NS39 739 aaKnown RBP18.57■□□□□ 0.56
ATG4D-207ENST00000587256 HDAC5Q9UQL6 1122 aa18.57■□□□□ 0.56
ATG4D-207ENST00000587256 TNNQ9UQP3 1299 aa18.57■□□□□ 0.56
ATG4D-207ENST00000587256 ZBTB12Q9Y330 459 aaPredicted RBP18.57■□□□□ 0.56
ATG4D-207ENST00000587256 PLIN1O60240 522 aa18.56■□□□□ 0.56
ATG4D-207ENST00000587256 RPS12P25398 132 aaKnown RBP18.56■□□□□ 0.56
ATG4D-207ENST00000587256 USP50Q70EL3 339 aaPredicted RBP18.56■□□□□ 0.56
ATG4D-207ENST00000587256 PODNQ7Z5L7 613 aa18.56■□□□□ 0.56
ATG4D-207ENST00000587256 MICALL2Q8IY33 904 aa18.56■□□□□ 0.56
ATG4D-207ENST00000587256 MEIS3Q99687 375 aa18.56■□□□□ 0.56
ATG4D-207ENST00000587256 LRRFIP2Q9Y608 721 aaKnown RBP18.56■□□□□ 0.56
ATG4D-207ENST00000587256 FTSJ3Q8IY81 847 aaKnown RBP18.55■□□□□ 0.56
ATG4D-207ENST00000587256 FBXW7Q969H0 707 aa18.55■□□□□ 0.56
ATG4D-207ENST00000587256 PUS3Q9BZE2 481 aaKnown RBP18.55■□□□□ 0.56
ATG4D-207ENST00000587256 COA1Q9GZY4 146 aa18.55■□□□□ 0.56
ATG4D-207ENST00000587256 PSME4Q14997 1843 aa18.54■□□□□ 0.56
ATG4D-207ENST00000587256 H7C1D1 291 aa18.54■□□□□ 0.56
ATG4D-207ENST00000587256 SNAP23O00161 211 aa18.54■□□□□ 0.56
ATG4D-207ENST00000587256 GNAI3P08754 354 aa18.54■□□□□ 0.56
ATG4D-207ENST00000587256 MAP1SQ66K74 1059 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms