RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 CTSWP56202 376 aa20.24■□□□□ 0.83
ATG4D-205ENST00000586477 EIF6P56537 245 aaKnown RBP20.24■□□□□ 0.83
ATG4D-205ENST00000586477 BEND3Q5T5X7 828 aa20.24■□□□□ 0.83
ATG4D-205ENST00000586477 TTLL11Q8NHH1 800 aa20.24■□□□□ 0.83
ATG4D-205ENST00000586477 CLUAP1Q96AJ1 413 aa20.24■□□□□ 0.83
ATG4D-205ENST00000586477 TMX4Q9H1E5 349 aaPredicted RBP20.24■□□□□ 0.83
ATG4D-205ENST00000586477 IQCA1LA6NCM1 817 aa20.23■□□□□ 0.83
ATG4D-205ENST00000586477 PLIN1O60240 522 aa20.23■□□□□ 0.83
ATG4D-205ENST00000586477 HSP90B1P14625 803 aaKnown RBP20.23■□□□□ 0.83
ATG4D-205ENST00000586477 SCNN1DP51172 638 aa20.23■□□□□ 0.83
ATG4D-205ENST00000586477 CXCL9Q07325 125 aa20.23■□□□□ 0.83
ATG4D-205ENST00000586477 CCDC152Q4G0S7 254 aa20.23■□□□□ 0.83
ATG4D-205ENST00000586477 UBE3BQ7Z3V4 1068 aa20.23■□□□□ 0.83
ATG4D-205ENST00000586477 GPR101Q96P66 508 aaPredicted RBP20.23■□□□□ 0.83
ATG4D-205ENST00000586477 HACL1Q9UJ83 578 aa20.23■□□□□ 0.83
ATG4D-205ENST00000586477 ZNRF3Q9ULT6 936 aa20.23■□□□□ 0.83
ATG4D-205ENST00000586477 GJA3Q9Y6H8 435 aa20.23■□□□□ 0.83
ATG4D-205ENST00000586477 PCNTO95613 3336 aa20.23■□□□□ 0.83
ATG4D-205ENST00000586477 YDJCA8MPS7 323 aa20.22■□□□□ 0.83
ATG4D-205ENST00000586477 NEFLP07196 543 aa20.22■□□□□ 0.83
ATG4D-205ENST00000586477 EPHX2P34913 555 aa20.22■□□□□ 0.83
ATG4D-205ENST00000586477 CHADLQ6NUI6 762 aa20.22■□□□□ 0.83
ATG4D-205ENST00000586477 DDX19BQ9UMR2 479 aa20.22■□□□□ 0.83
ATG4D-205ENST00000586477 NSFL1CQ9UNZ2 370 aaKnown RBP20.22■□□□□ 0.83
ATG4D-205ENST00000586477 SCN9AQ15858 1988 aa20.22■□□□□ 0.83
ATG4D-205ENST00000586477 RTL9Q8NET4 1388 aa20.21■□□□□ 0.83
ATG4D-205ENST00000586477 ITPRIPQ8IWB1 547 aa20.21■□□□□ 0.83
ATG4D-205ENST00000586477 PLA2G12BQ9BX93 195 aa20.21■□□□□ 0.83
ATG4D-205ENST00000586477 GREM2Q9H772 168 aa20.21■□□□□ 0.83
ATG4D-205ENST00000586477 EPS15P42566 896 aa20.2■□□□□ 0.82
ATG4D-205ENST00000586477 AAMPQ13685 434 aa20.2■□□□□ 0.82
ATG4D-205ENST00000586477 MVPQ14764 893 aaKnown RBP20.2■□□□□ 0.82
ATG4D-205ENST00000586477 IFFO2Q5TF58 517 aa20.2■□□□□ 0.82
ATG4D-205ENST00000586477 LDHDQ86WU2 507 aa20.2■□□□□ 0.82
ATG4D-205ENST00000586477 TMEM57Q8N5G2 664 aa20.2■□□□□ 0.82
ATG4D-205ENST00000586477 TBC1D16Q8TBP0 767 aa20.2■□□□□ 0.82
ATG4D-205ENST00000586477 PODXL2Q9NZ53 605 aa20.2■□□□□ 0.82
ATG4D-205ENST00000586477 C9orf78Q9NZ63 289 aaPredicted RBP20.2■□□□□ 0.82
ATG4D-205ENST00000586477 GNAI3P08754 354 aa20.19■□□□□ 0.82
ATG4D-205ENST00000586477 PANK1Q8TE04 598 aa20.19■□□□□ 0.82
ATG4D-205ENST00000586477 WTIPA6NIX2 430 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-205ENST00000586477 CSF1RP07333 972 aa20.18■□□□□ 0.82
ATG4D-205ENST00000586477 WASHC4Q2M389 1173 aa20.18■□□□□ 0.82
ATG4D-205ENST00000586477 EAPPQ56P03 285 aaPredicted RBP20.18■□□□□ 0.82
ATG4D-205ENST00000586477 JMYQ8N9B5 988 aa20.18■□□□□ 0.82
ATG4D-205ENST00000586477 C6orf229H3BNL8 230 aa20.17■□□□□ 0.82
ATG4D-205ENST00000586477 GRM8O00222 908 aa20.17■□□□□ 0.82
ATG4D-205ENST00000586477 RIMBP2O15034 1052 aa20.17■□□□□ 0.82
ATG4D-205ENST00000586477 RAD17O75943 681 aa20.17■□□□□ 0.82
ATG4D-205ENST00000586477 ITGBL1O95965 494 aaPredicted RBP20.17■□□□□ 0.82
ATG4D-205ENST00000586477 ANKRD18AQ8IVF6 992 aa20.17■□□□□ 0.82
ATG4D-205ENST00000586477 KCNQ5Q9NR82 932 aa20.17■□□□□ 0.82
ATG4D-205ENST00000586477 PASKQ96RG2 1323 aa20.17■□□□□ 0.82
ATG4D-205ENST00000586477 RLBP1P12271 317 aa20.16■□□□□ 0.82
ATG4D-205ENST00000586477 DBNDD1Q9H9R9 158 aa20.16■□□□□ 0.82
ATG4D-205ENST00000586477 COG6Q9Y2V7 657 aa20.16■□□□□ 0.82
ATG4D-205ENST00000586477 PSME4Q14997 1843 aa20.16■□□□□ 0.82
ATG4D-205ENST00000586477 SHTN1A0MZ66 631 aa20.15■□□□□ 0.82
ATG4D-205ENST00000586477 GMPSP49915 693 aaPredicted RBP20.15■□□□□ 0.82
ATG4D-205ENST00000586477 FOXO4P98177 505 aa20.15■□□□□ 0.82
ATG4D-205ENST00000586477 FAM161AQ3B820 660 aa20.15■□□□□ 0.82
ATG4D-205ENST00000586477 CIAPIN1Q6FI81 312 aa20.15■□□□□ 0.82
ATG4D-205ENST00000586477 GPRC5DQ9NZD1 345 aa20.15■□□□□ 0.82
ATG4D-205ENST00000586477 TNNQ9UQP3 1299 aa20.15■□□□□ 0.82
ATG4D-205ENST00000586477 A0A1B0GUL6 1792 aa20.15■□□□□ 0.82
ATG4D-205ENST00000586477 ZNF646O15015 1829 aaPredicted RBP20.14■□□□□ 0.81
ATG4D-205ENST00000586477 UTYO14607 1347 aa20.14■□□□□ 0.81
ATG4D-205ENST00000586477 UFL1O94874 794 aa20.14■□□□□ 0.81
ATG4D-205ENST00000586477 UBTFL1P0CB47 393 aaPredicted RBP20.14■□□□□ 0.81
ATG4D-205ENST00000586477 DOK7Q18PE1 504 aa20.14■□□□□ 0.81
ATG4D-205ENST00000586477 EPHA10Q5JZY3 1008 aa20.14■□□□□ 0.81
ATG4D-205ENST00000586477 C20orf194Q5TEA3 1177 aa20.14■□□□□ 0.81
ATG4D-205ENST00000586477 PNMA8AQ86V59 439 aaPredicted RBP20.14■□□□□ 0.81
ATG4D-205ENST00000586477 CDC5LQ99459 802 aaKnown RBP20.14■□□□□ 0.81
ATG4D-205ENST00000586477 BSDC1Q9NW68 430 aaPredicted RBP20.14■□□□□ 0.81
ATG4D-205ENST00000586477 MINPP1Q9UNW1 487 aa20.14■□□□□ 0.81
ATG4D-205ENST00000586477 ECE2O60344 883 aa20.13■□□□□ 0.81
ATG4D-205ENST00000586477 MAP1SQ66K74 1059 aaPredicted RBP20.13■□□□□ 0.81
ATG4D-205ENST00000586477 ANKIB1Q9P2G1 1089 aa20.13■□□□□ 0.81
ATG4D-205ENST00000586477 GGA1Q9UJY5 639 aa20.13■□□□□ 0.81
ATG4D-205ENST00000586477 CLEC11AQ9Y240 323 aa20.13■□□□□ 0.81
ATG4D-205ENST00000586477 XDHP47989 1333 aa20.12■□□□□ 0.81
ATG4D-205ENST00000586477 PSMD14O00487 310 aa20.12■□□□□ 0.81
ATG4D-205ENST00000586477 ITGA6P23229 1130 aa20.12■□□□□ 0.81
ATG4D-205ENST00000586477 LMOD1P29536 600 aaPredicted RBP20.12■□□□□ 0.81
ATG4D-205ENST00000586477 EYA3Q99504 573 aa20.12■□□□□ 0.81
ATG4D-205ENST00000586477 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
ATG4D-205ENST00000586477 ZBTB7BO15156 539 aaPredicted RBP20.11■□□□□ 0.81
ATG4D-205ENST00000586477 TNIP1Q15025 636 aa20.11■□□□□ 0.81
ATG4D-205ENST00000586477 ZBTB12Q9Y330 459 aaPredicted RBP20.11■□□□□ 0.81
ATG4D-205ENST00000586477 GNAI2P04899 355 aa20.1■□□□□ 0.81
ATG4D-205ENST00000586477 HIRAP54198 1017 aaPredicted RBP20.1■□□□□ 0.81
ATG4D-205ENST00000586477 USP50Q70EL3 339 aaPredicted RBP20.1■□□□□ 0.81
ATG4D-205ENST00000586477 CNTROBQ8N137 903 aa20.1■□□□□ 0.81
ATG4D-205ENST00000586477 KAZALD1Q96I82 304 aa20.1■□□□□ 0.81
ATG4D-205ENST00000586477 ZC3H12CQ9C0D7 883 aaKnown RBP20.1■□□□□ 0.81
ATG4D-205ENST00000586477 CREBZFQ9NS37 354 aa20.1■□□□□ 0.81
ATG4D-205ENST00000586477 ADARB2Q9NS39 739 aaKnown RBP20.1■□□□□ 0.81
ATG4D-205ENST00000586477 FMR1Q06787 632 aaKnown RBP eCLIP20.09■□□□□ 0.81
ATG4D-205ENST00000586477 TRPM4Q8TD43 1214 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms