RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 PDZRN3Q9UPQ7 1066 aa10.23□□□□□ -0.77
SMAD4-204ENST00000586253 KIAA1551Q9HCM1 1747 aa10.23□□□□□ -0.77
SMAD4-204ENST00000586253 ADCY9O60503 1353 aa10.23□□□□□ -0.77
SMAD4-204ENST00000586253 RIC1Q4ADV7 1423 aa10.23□□□□□ -0.77
SMAD4-204ENST00000586253 PI4KAP2A4QPH2 592 aa10.22□□□□□ -0.77
SMAD4-204ENST00000586253 GPTP24298 496 aa10.22□□□□□ -0.77
SMAD4-204ENST00000586253 FKBP5Q13451 457 aaPredicted RBP10.22□□□□□ -0.77
SMAD4-204ENST00000586253 PROX2Q3B8N5 592 aa10.22□□□□□ -0.77
SMAD4-204ENST00000586253 NLRP10Q86W26 655 aa10.22□□□□□ -0.77
SMAD4-204ENST00000586253 PI4KAP1Q8N8J0 262 aa10.22□□□□□ -0.77
SMAD4-204ENST00000586253 SSH1Q8WYL5 1049 aa10.22□□□□□ -0.77
SMAD4-204ENST00000586253 BRIP1Q9BX63 1249 aa10.22□□□□□ -0.77
SMAD4-204ENST00000586253 MAP3K2Q9Y2U5 619 aa10.22□□□□□ -0.77
SMAD4-204ENST00000586253 PTPRCP08575 1304 aa10.22□□□□□ -0.77
SMAD4-204ENST00000586253 PXDNLA1KZ92 1463 aa10.22□□□□□ -0.77
SMAD4-204ENST00000586253 ANKRD31Q8N7Z5 1873 aa10.21□□□□□ -0.77
SMAD4-204ENST00000586253 NPHP1O15259 732 aa10.21□□□□□ -0.77
SMAD4-204ENST00000586253 NTSR2O95665 410 aa10.21□□□□□ -0.77
SMAD4-204ENST00000586253 PDE6BP35913 854 aa10.21□□□□□ -0.77
SMAD4-204ENST00000586253 NEXNQ0ZGT2 675 aa10.21□□□□□ -0.77
SMAD4-204ENST00000586253 SUSD4Q5VX71 490 aa10.21□□□□□ -0.77
SMAD4-204ENST00000586253 CCDC191Q8NCU4 936 aa10.21□□□□□ -0.77
SMAD4-204ENST00000586253 NLGN2Q8NFZ4 835 aa10.21□□□□□ -0.77
SMAD4-204ENST00000586253 UTP14AQ9BVJ6 771 aaKnown RBP10.21□□□□□ -0.77
SMAD4-204ENST00000586253 DLEC1Q9Y238 1755 aa10.21□□□□□ -0.78
SMAD4-204ENST00000586253 KLRG2A4D1S0 409 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-204ENST00000586253 GTF2E1P29083 439 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-204ENST00000586253 BRCA1P38398 1863 aaKnown RBP10.2□□□□□ -0.78
SMAD4-204ENST00000586253 RARSP54136 660 aaKnown RBP10.2□□□□□ -0.78
SMAD4-204ENST00000586253 N4BP2Q86UW6 1770 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-204ENST00000586253 DNAAF4Q8WXU2 420 aa10.2□□□□□ -0.78
SMAD4-204ENST00000586253 SMC4Q9NTJ3 1288 aa10.2□□□□□ -0.78
SMAD4-204ENST00000586253 RABGEF1Q9UJ41 708 aa10.2□□□□□ -0.78
SMAD4-204ENST00000586253 SH3TC1Q8TE82 1336 aa10.19□□□□□ -0.78
SMAD4-204ENST00000586253 KIF16BQ96L93 1317 aa10.19□□□□□ -0.78
SMAD4-204ENST00000586253 ATP5J2-PTCD1G3V325 749 aa10.19□□□□□ -0.78
SMAD4-204ENST00000586253 SLC10A5Q5PT55 438 aa10.19□□□□□ -0.78
SMAD4-204ENST00000586253 MYD88Q99836 296 aa10.19□□□□□ -0.78
SMAD4-204ENST00000586253 WDR70Q9NW82 654 aa10.19□□□□□ -0.78
SMAD4-204ENST00000586253 CWC25Q9NXE8 425 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-204ENST00000586253 TRMT112Q9UI30 125 aaKnown RBP10.19□□□□□ -0.78
SMAD4-204ENST00000586253 ABCC12Q96J65 1359 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 FAM177BA6PVY3 158 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 H0YIN7 160 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 IGKV5-2P06315 115 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
SMAD4-204ENST00000586253 DPEP1P16444 411 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 KCNA3P22001 575 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 CRY2Q49AN0 593 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 ERFEQ4G0M1 354 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 TYW1BQ6NUM6 668 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 NUTM1Q86Y26 1132 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 ZBTB38Q8NAP3 1195 aaPredicted RBP10.18□□□□□ -0.78
SMAD4-204ENST00000586253 LINS1Q8NG48 757 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 BCL2L13Q9BXK5 485 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 NBPF3Q9H094 633 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 LAMB2P55268 1798 aa10.18□□□□□ -0.78
SMAD4-204ENST00000586253 COL11A2P13942 1736 aaPredicted RBP10.18□□□□□ -0.78
SMAD4-204ENST00000586253 A0A0G2JLW4 131 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 NEURL1BA8MQ27 555 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 F6X3S4 739 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 BEND3Q5T5X7 828 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 STYK1Q6J9G0 422 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 C2CD5Q86YS7 1000 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 CCDC24Q8N4L8 307 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 KCNV2Q8TDN2 545 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 ARHGAP45Q92619 1136 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 FBXW7Q969H0 707 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 PIM2Q9P1W9 311 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 TNRC6CQ9HCJ0 1690 aaKnown RBP10.17□□□□□ -0.78
SMAD4-204ENST00000586253 ARFGEF1Q9Y6D6 1849 aa10.17□□□□□ -0.78
SMAD4-204ENST00000586253 DDX60Q8IY21 1712 aaKnown RBP10.16□□□□□ -0.78
SMAD4-204ENST00000586253 ALDH1L1O75891 902 aa10.16□□□□□ -0.78
SMAD4-204ENST00000586253 RGS20O76081 388 aa10.16□□□□□ -0.78
SMAD4-204ENST00000586253 PCCAP05165 728 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-204ENST00000586253 SRGNP10124 158 aa10.16□□□□□ -0.78
SMAD4-204ENST00000586253 NPR1P16066 1061 aa10.16□□□□□ -0.78
SMAD4-204ENST00000586253 CHRNA5P30532 468 aa10.16□□□□□ -0.78
SMAD4-204ENST00000586253 GCKRQ14397 625 aa10.16□□□□□ -0.78
SMAD4-204ENST00000586253 MASTLQ96GX5 879 aa10.16□□□□□ -0.78
SMAD4-204ENST00000586253 NLRP3Q96P20 1036 aa10.16□□□□□ -0.78
SMAD4-204ENST00000586253 API5Q9BZZ5 524 aaKnown RBP10.16□□□□□ -0.78
SMAD4-204ENST00000586253 UTRNP46939 3433 aa10.16□□□□□ -0.78
SMAD4-204ENST00000586253 GOLGB1Q14789 3259 aaKnown RBP10.16□□□□□ -0.78
SMAD4-204ENST00000586253 CDHR2Q9BYE9 1310 aa10.15□□□□□ -0.78
SMAD4-204ENST00000586253 IPO8O15397 1037 aaKnown RBP10.15□□□□□ -0.78
SMAD4-204ENST00000586253 HOXA10P31260 410 aaPredicted RBP10.15□□□□□ -0.78
SMAD4-204ENST00000586253 CWF19L2Q2TBE0 894 aaKnown RBP10.15□□□□□ -0.78
SMAD4-204ENST00000586253 DALRD3Q5D0E6 543 aaKnown RBP10.15□□□□□ -0.78
SMAD4-204ENST00000586253 TTLL6Q8N841 843 aa10.15□□□□□ -0.78
SMAD4-204ENST00000586253 CNKSR1Q969H4 720 aa10.15□□□□□ -0.78
SMAD4-204ENST00000586253 FAM89AQ96GI7 184 aa10.15□□□□□ -0.78
SMAD4-204ENST00000586253 NOB1Q9ULX3 412 aaKnown RBP10.15□□□□□ -0.78
SMAD4-204ENST00000586253 GOLGA8CPA6NN73 597 aa10.14□□□□□ -0.79
SMAD4-204ENST00000586253 H7C1W4 665 aa10.14□□□□□ -0.79
SMAD4-204ENST00000586253 IRS4O14654 1257 aaPredicted RBP10.14□□□□□ -0.79
SMAD4-204ENST00000586253 GRIN3BO60391 1043 aa10.14□□□□□ -0.79
SMAD4-204ENST00000586253 HCLS1P14317 486 aaPredicted RBP10.14□□□□□ -0.79
SMAD4-204ENST00000586253 ALDH1B1P30837 517 aa10.14□□□□□ -0.79
SMAD4-204ENST00000586253 SF3B3Q15393 1217 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms