RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 TRIM28Q13263 835 aaKnown RBP15.1■□□□□ 0.01
LIG3-207ENST00000586119 TMC4Q7Z404 712 aa15.1■□□□□ 0.01
LIG3-207ENST00000586119 C8orf58Q8NAV2 365 aa15.1■□□□□ 0.01
LIG3-207ENST00000586119 BEGAINQ9BUH8 593 aa15.1■□□□□ 0.01
LIG3-207ENST00000586119 ASTN2O75129 1339 aaPredicted RBP15.1■□□□□ 0.01
LIG3-207ENST00000586119 WTIPA6NIX2 430 aaPredicted RBP15.09■□□□□ 0.01
LIG3-207ENST00000586119 ADM5C9JUS6 153 aa15.09■□□□□ 0.01
LIG3-207ENST00000586119 DPF2Q92785 391 aa15.09■□□□□ 0.01
LIG3-207ENST00000586119 CDHR2Q9BYE9 1310 aa15.09■□□□□ 0.01
LIG3-207ENST00000586119 CCDC85CA6NKD9 419 aa15.08■□□□□ 0
LIG3-207ENST00000586119 ZBTB38Q8NAP3 1195 aaPredicted RBP15.08■□□□□ 0
LIG3-207ENST00000586119 PRKRIP1Q9H875 184 aaPredicted RBP15.08■□□□□ 0
LIG3-207ENST00000586119 HUNKP57058 714 aa15.07■□□□□ 0
LIG3-207ENST00000586119 TSPYL6Q8N831 410 aa15.07■□□□□ 0
LIG3-207ENST00000586119 HHIPL1Q96JK4 782 aa15.07■□□□□ 0
LIG3-207ENST00000586119 UFL1O94874 794 aa15.06■□□□□ 0
LIG3-207ENST00000586119 VIL1P09327 827 aaKnown RBP15.06■□□□□ 0
LIG3-207ENST00000586119 GOLGA2Q08379 1002 aa15.06■□□□□ 0
LIG3-207ENST00000586119 KRT26Q7Z3Y9 468 aa15.06■□□□□ 0
LIG3-207ENST00000586119 EYA3Q99504 573 aa15.06■□□□□ 0
LIG3-207ENST00000586119 ZC3H12CQ9C0D7 883 aaKnown RBP15.06■□□□□ 0
LIG3-207ENST00000586119 SCAF8Q9UPN6 1271 aaKnown RBP15.06■□□□□ 0
LIG3-207ENST00000586119 FAM155AB1AL88 458 aaPredicted RBP15.05■□□□□ -0
LIG3-207ENST00000586119 FAM161AQ3B820 660 aa15.05■□□□□ -0
LIG3-207ENST00000586119 CCDC184Q52MB2 194 aa15.05■□□□□ -0
LIG3-207ENST00000586119 IFT57Q9NWB7 429 aa15.05■□□□□ -0
LIG3-207ENST00000586119 PODXL2Q9NZ53 605 aa15.05■□□□□ -0
LIG3-207ENST00000586119 ANKIB1Q9P2G1 1089 aa15.05■□□□□ -0
LIG3-207ENST00000586119 PDE8AO60658 829 aa15.04■□□□□ -0
LIG3-207ENST00000586119 PCCAP05165 728 aaPredicted RBP15.04■□□□□ -0
LIG3-207ENST00000586119 BRPF1P55201 1214 aaPredicted RBP15.04■□□□□ -0
LIG3-207ENST00000586119 GNAI1P63096 354 aa15.04■□□□□ -0
LIG3-207ENST00000586119 KIF4BQ2VIQ3 1234 aa15.04■□□□□ -0
LIG3-207ENST00000586119 DCPSQ96C86 337 aaKnown RBP15.04■□□□□ -0
LIG3-207ENST00000586119 METTL22Q9BUU2 404 aaPredicted RBP15.04■□□□□ -0
LIG3-207ENST00000586119 MCOLN1Q9GZU1 580 aa15.04■□□□□ -0
LIG3-207ENST00000586119 GBA2Q9HCG7 927 aaPredicted RBP15.04■□□□□ -0
LIG3-207ENST00000586119 RPS12P25398 132 aaKnown RBP15.03■□□□□ -0
LIG3-207ENST00000586119 RGMBQ6NW40 437 aa15.03■□□□□ -0
LIG3-207ENST00000586119 CCDC191Q8NCU4 936 aa15.03■□□□□ -0
LIG3-207ENST00000586119 TSR2Q969E8 191 aaKnown RBP15.03■□□□□ -0
LIG3-207ENST00000586119 CWC25Q9NXE8 425 aaPredicted RBP15.03■□□□□ -0
LIG3-207ENST00000586119 GGA1Q9UJY5 639 aa15.03■□□□□ -0
LIG3-207ENST00000586119 MAP3K2Q9Y2U5 619 aa15.03■□□□□ -0
LIG3-207ENST00000586119 G3V3G9 751 aa15.02■□□□□ -0
LIG3-207ENST00000586119 IGKV5-2P06315 115 aa15.02■□□□□ -0
LIG3-207ENST00000586119 KIF23Q02241 960 aaPredicted RBP15.02■□□□□ -0
LIG3-207ENST00000586119 SCARF1Q14162 830 aa15.02■□□□□ -0
LIG3-207ENST00000586119 CCDC152Q4G0S7 254 aa15.02■□□□□ -0
LIG3-207ENST00000586119 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
LIG3-207ENST00000586119 G2E3Q7L622 706 aa15.02■□□□□ -0
LIG3-207ENST00000586119 MXD3Q9BW11 206 aa15.02■□□□□ -0
LIG3-207ENST00000586119 GGA3Q9NZ52 723 aa15.02■□□□□ -0
LIG3-207ENST00000586119 SPEF2Q9C093 1822 aa15.01□□□□□ -0.01
LIG3-207ENST00000586119 PI4KAP2A4QPH2 592 aa15.01□□□□□ -0.01
LIG3-207ENST00000586119 NOGQ13253 232 aa15.01□□□□□ -0.01
LIG3-207ENST00000586119 PI4KAP1Q8N8J0 262 aa15.01□□□□□ -0.01
LIG3-207ENST00000586119 C2orf69Q8N8R5 385 aa15.01□□□□□ -0.01
LIG3-207ENST00000586119 CDCA5Q96FF9 252 aa15.01□□□□□ -0.01
LIG3-207ENST00000586119 GMLQ99445 158 aa15.01□□□□□ -0.01
LIG3-207ENST00000586119 ZNF157P51786 506 aaPredicted RBP15□□□□□ -0.01
LIG3-207ENST00000586119 ZNF280AP59817 542 aaPredicted RBP15□□□□□ -0.01
LIG3-207ENST00000586119 DGKZQ13574 1117 aa15□□□□□ -0.01
LIG3-207ENST00000586119 CWF19L2Q2TBE0 894 aaKnown RBP15□□□□□ -0.01
LIG3-207ENST00000586119 ANGEL2Q5VTE6 544 aaKnown RBP15□□□□□ -0.01
LIG3-207ENST00000586119 CCDC30Q5VVM6 783 aa15□□□□□ -0.01
LIG3-207ENST00000586119 PRAMEF18Q5VWM3 479 aa15□□□□□ -0.01
LIG3-207ENST00000586119 RSBN1LQ6PCB5 846 aaPredicted RBP15□□□□□ -0.01
LIG3-207ENST00000586119 MOB2Q70IA6 237 aa15□□□□□ -0.01
LIG3-207ENST00000586119 ANKRD18AQ8IVF6 992 aa15□□□□□ -0.01
LIG3-207ENST00000586119 TTLL11Q8NHH1 800 aa15□□□□□ -0.01
LIG3-207ENST00000586119 PSME4Q14997 1843 aa15□□□□□ -0.01
LIG3-207ENST00000586119 CA12O43570 354 aa14.99□□□□□ -0.01
LIG3-207ENST00000586119 KSR2Q6VAB6 950 aa14.99□□□□□ -0.01
LIG3-207ENST00000586119 SULF1Q8IWU6 871 aa14.99□□□□□ -0.01
LIG3-207ENST00000586119 CSRNP1Q96S65 589 aa14.99□□□□□ -0.01
LIG3-207ENST00000586119 GREM2Q9H772 168 aa14.99□□□□□ -0.01
LIG3-207ENST00000586119 MINPP1Q9UNW1 487 aa14.99□□□□□ -0.01
LIG3-207ENST00000586119 AKAP11Q9UKA4 1901 aa14.98□□□□□ -0.01
LIG3-207ENST00000586119 TRPA1O75762 1119 aa14.98□□□□□ -0.01
LIG3-207ENST00000586119 ATP2B4P23634 1241 aa14.98□□□□□ -0.01
LIG3-207ENST00000586119 RGS19P49795 217 aa14.98□□□□□ -0.01
LIG3-207ENST00000586119 CTSWP56202 376 aa14.98□□□□□ -0.01
LIG3-207ENST00000586119 TXNRD3Q86VQ6 643 aa14.98□□□□□ -0.01
LIG3-207ENST00000586119 AGBL3Q8NEM8 1001 aa14.98□□□□□ -0.01
LIG3-207ENST00000586119 RNF186Q9NXI6 227 aa14.98□□□□□ -0.01
LIG3-207ENST00000586119 MYH3P11055 1940 aa14.98□□□□□ -0.01
LIG3-207ENST00000586119 XDHP47989 1333 aa14.97□□□□□ -0.01
LIG3-207ENST00000586119 DDX58O95786 925 aaKnown RBP14.97□□□□□ -0.01
LIG3-207ENST00000586119 USP17L8P0C7I0 530 aa14.97□□□□□ -0.01
LIG3-207ENST00000586119 CALD1Q05682 793 aaKnown RBP14.97□□□□□ -0.01
LIG3-207ENST00000586119 NBPF9Q3BBW0 867 aa14.97□□□□□ -0.01
LIG3-207ENST00000586119 CCDC102AQ96A19 550 aa14.97□□□□□ -0.01
LIG3-207ENST00000586119 MYOZ2Q9NPC6 264 aa14.97□□□□□ -0.01
LIG3-207ENST00000586119 USP17L3A6NCW0 530 aa14.96□□□□□ -0.01
LIG3-207ENST00000586119 USP17L4A6NCW7 530 aa14.96□□□□□ -0.01
LIG3-207ENST00000586119 NEURL1BA8MQ27 555 aa14.96□□□□□ -0.01
LIG3-207ENST00000586119 SLC10A3P09131 477 aa14.96□□□□□ -0.01
LIG3-207ENST00000586119 HSP90B1P14625 803 aaKnown RBP14.96□□□□□ -0.01
LIG3-207ENST00000586119 KLRK1P26718 216 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms