RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 FER1L6Q2WGJ9 1857 aa15.69■□□□□ 0.1
VMP1-202ENST00000585847 LTBP1Q14766 1721 aa15.68■□□□□ 0.1
VMP1-202ENST00000585847 RPS8P62241 208 aaKnown RBP15.68■□□□□ 0.1
VMP1-202ENST00000585847 PTPN12Q05209 780 aaKnown RBP15.68■□□□□ 0.1
VMP1-202ENST00000585847 POLA2Q14181 598 aa15.68■□□□□ 0.1
VMP1-202ENST00000585847 C16orf71Q8IYS4 520 aaPredicted RBP15.68■□□□□ 0.1
VMP1-202ENST00000585847 KLHDC4Q8TBB5 520 aa15.68■□□□□ 0.1
VMP1-202ENST00000585847 CHMP3Q9Y3E7 222 aa15.68■□□□□ 0.1
VMP1-202ENST00000585847 ANKRD18BA2A2Z9 1011 aa15.67■□□□□ 0.1
VMP1-202ENST00000585847 IFIT5Q13325 482 aaKnown RBP15.67■□□□□ 0.1
VMP1-202ENST00000585847 DALRD3Q5D0E6 543 aaKnown RBP15.67■□□□□ 0.1
VMP1-202ENST00000585847 SSH3Q8TE77 659 aa15.67■□□□□ 0.1
VMP1-202ENST00000585847 PUS3Q9BZE2 481 aaKnown RBP15.67■□□□□ 0.1
VMP1-202ENST00000585847 PPEF1O14829 653 aaPredicted RBP15.66■□□□□ 0.1
VMP1-202ENST00000585847 BBOX1O75936 387 aa15.66■□□□□ 0.1
VMP1-202ENST00000585847 CCDC57Q2TAC2 916 aa15.66■□□□□ 0.1
VMP1-202ENST00000585847 PA2G4Q9UQ80 394 aaKnown RBP15.66■□□□□ 0.1
VMP1-202ENST00000585847 DUOX1Q9NRD9 1551 aa15.66■□□□□ 0.1
VMP1-202ENST00000585847 SRGAP3O43295 1099 aa15.65■□□□□ 0.1
VMP1-202ENST00000585847 C21orf2O43822 256 aa15.65■□□□□ 0.1
VMP1-202ENST00000585847 LRRC24Q50LG9 513 aa15.65■□□□□ 0.1
VMP1-202ENST00000585847 HSP90AB4PQ58FF6 505 aa15.65■□□□□ 0.1
VMP1-202ENST00000585847 ANKRD18AQ8IVF6 992 aa15.65■□□□□ 0.1
VMP1-202ENST00000585847 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
VMP1-202ENST00000585847 CDC5LQ99459 802 aaKnown RBP15.65■□□□□ 0.1
VMP1-202ENST00000585847 NMRK2Q9NPI5 230 aa15.65■□□□□ 0.1
VMP1-202ENST00000585847 COPRSQ9NQ92 184 aa15.65■□□□□ 0.1
VMP1-202ENST00000585847 BSDC1Q9NW68 430 aaPredicted RBP15.65■□□□□ 0.1
VMP1-202ENST00000585847 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
VMP1-202ENST00000585847 ZBTB47Q9UFB7 747 aaPredicted RBP15.65■□□□□ 0.1
VMP1-202ENST00000585847 ATP6V0A2Q9Y487 856 aa15.65■□□□□ 0.1
VMP1-202ENST00000585847 C9orf131Q5VYM1 1079 aa15.64■□□□□ 0.09
VMP1-202ENST00000585847 MINPP1Q9UNW1 487 aa15.64■□□□□ 0.09
VMP1-202ENST00000585847 RIPOR2Q9Y4F9 1068 aa15.64■□□□□ 0.09
VMP1-202ENST00000585847 SBF1O95248 1867 aa15.63■□□□□ 0.09
VMP1-202ENST00000585847 PRELPP51888 382 aa15.63■□□□□ 0.09
VMP1-202ENST00000585847 ATG9AQ7Z3C6 839 aa15.63■□□□□ 0.09
VMP1-202ENST00000585847 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.63■□□□□ 0.09
VMP1-202ENST00000585847 CCDC88AQ3V6T2 1871 aa15.63■□□□□ 0.09
VMP1-202ENST00000585847 WTIPA6NIX2 430 aaPredicted RBP15.62■□□□□ 0.09
VMP1-202ENST00000585847 NFKBIEO00221 500 aa15.62■□□□□ 0.09
VMP1-202ENST00000585847 IGHDP01880 384 aa15.62■□□□□ 0.09
VMP1-202ENST00000585847 IGHMBP2P38935 993 aaKnown RBP15.62■□□□□ 0.09
VMP1-202ENST00000585847 GPSM2P81274 684 aa15.62■□□□□ 0.09
VMP1-202ENST00000585847 TMC4Q7Z404 712 aa15.62■□□□□ 0.09
VMP1-202ENST00000585847 DCTPP1Q9H773 170 aa15.62■□□□□ 0.09
VMP1-202ENST00000585847 WDR90Q96KV7 1748 aa15.62■□□□□ 0.09
VMP1-202ENST00000585847 EYA2O00167 538 aa15.61■□□□□ 0.09
VMP1-202ENST00000585847 LDHAL6AQ6ZMR3 332 aa15.61■□□□□ 0.09
VMP1-202ENST00000585847 VGLL2Q8N8G2 317 aa15.61■□□□□ 0.09
VMP1-202ENST00000585847 RBM46Q8TBY0 533 aaKnown RBP15.61■□□□□ 0.09
VMP1-202ENST00000585847 RNF181Q9P0P0 153 aa15.61■□□□□ 0.09
VMP1-202ENST00000585847 NOP58Q9Y2X3 529 aaKnown RBP15.61■□□□□ 0.09
VMP1-202ENST00000585847 SNAP23O00161 211 aa15.6■□□□□ 0.09
VMP1-202ENST00000585847 EIF5BO60841 1220 aaKnown RBP15.6■□□□□ 0.09
VMP1-202ENST00000585847 RAB11FIP3O75154 756 aa15.6■□□□□ 0.09
VMP1-202ENST00000585847 NUCB1Q02818 461 aa15.6■□□□□ 0.09
VMP1-202ENST00000585847 CHRNDQ07001 517 aa15.6■□□□□ 0.09
VMP1-202ENST00000585847 CCDC93Q567U6 631 aa15.6■□□□□ 0.09
VMP1-202ENST00000585847 TAF7LQ5H9L4 462 aa15.6■□□□□ 0.09
VMP1-202ENST00000585847 CC2D2BQ6DHV5 1058 aa15.6■□□□□ 0.09
VMP1-202ENST00000585847 ERC1Q8IUD2 1116 aa15.6■□□□□ 0.09
VMP1-202ENST00000585847 MPHOSPH8Q99549 860 aa15.6■□□□□ 0.09
VMP1-202ENST00000585847 SIL1Q9H173 461 aa15.6■□□□□ 0.09
VMP1-202ENST00000585847 PODXL2Q9NZ53 605 aa15.6■□□□□ 0.09
VMP1-202ENST00000585847 CIAO1O76071 339 aa15.59■□□□□ 0.09
VMP1-202ENST00000585847 SASH1O94885 1247 aa15.59■□□□□ 0.09
VMP1-202ENST00000585847 RASSF7Q02833 373 aa15.59■□□□□ 0.09
VMP1-202ENST00000585847 HELBQ8NG08 1087 aaPredicted RBP15.59■□□□□ 0.09
VMP1-202ENST00000585847 RTFDC1Q9BY42 306 aaPredicted RBP15.59■□□□□ 0.09
VMP1-202ENST00000585847 CNNM1Q9NRU3 951 aa15.59■□□□□ 0.09
VMP1-202ENST00000585847 POLLQ9UGP5 575 aa15.59■□□□□ 0.09
VMP1-202ENST00000585847 FBXO3Q9UK99 471 aa15.59■□□□□ 0.09
VMP1-202ENST00000585847 IRS2Q9Y4H2 1338 aa15.59■□□□□ 0.09
VMP1-202ENST00000585847 COL4A5P29400 1685 aa15.58■□□□□ 0.08
VMP1-202ENST00000585847 TAF5LO75529 589 aa15.58■□□□□ 0.08
VMP1-202ENST00000585847 FSTL1Q12841 308 aa15.58■□□□□ 0.08
VMP1-202ENST00000585847 DNAJC5GQ8N7S2 189 aa15.58■□□□□ 0.08
VMP1-202ENST00000585847 GPR101Q96P66 508 aaPredicted RBP15.58■□□□□ 0.08
VMP1-202ENST00000585847 DICER1Q9UPY3 1922 aaKnown RBP15.58■□□□□ 0.08
VMP1-202ENST00000585847 FKBP4Q02790 459 aaKnown RBP eCLIP15.57■□□□□ 0.08
VMP1-202ENST00000585847 SOGA3Q5TF21 947 aa15.57■□□□□ 0.08
VMP1-202ENST00000585847 CHD1LQ86WJ1 897 aa15.57■□□□□ 0.08
VMP1-202ENST00000585847 MPNDQ8N594 471 aa15.57■□□□□ 0.08
VMP1-202ENST00000585847 TBC1D16Q8TBP0 767 aa15.57■□□□□ 0.08
VMP1-202ENST00000585847 PSMD1Q99460 953 aa15.57■□□□□ 0.08
VMP1-202ENST00000585847 NSFL1CQ9UNZ2 370 aaKnown RBP15.57■□□□□ 0.08
VMP1-202ENST00000585847 LTBP3Q9NS15 1303 aa15.57■□□□□ 0.08
VMP1-202ENST00000585847 SURF6O75683 361 aaKnown RBP15.56■□□□□ 0.08
VMP1-202ENST00000585847 FGFR2P21802 821 aa15.56■□□□□ 0.08
VMP1-202ENST00000585847 KLRK1P26718 216 aa15.56■□□□□ 0.08
VMP1-202ENST00000585847 IL15P40933 162 aaPredicted RBP15.56■□□□□ 0.08
VMP1-202ENST00000585847 RTKN2Q8IZC4 609 aa15.56■□□□□ 0.08
VMP1-202ENST00000585847 RRAGCQ9HB90 399 aa15.56■□□□□ 0.08
VMP1-202ENST00000585847 EXOC6BQ9Y2D4 811 aa15.56■□□□□ 0.08
VMP1-202ENST00000585847 XDHP47989 1333 aa15.56■□□□□ 0.08
VMP1-202ENST00000585847 MROH5Q6ZUA9 1318 aa15.55■□□□□ 0.08
VMP1-202ENST00000585847 DPP8Q6V1X1 898 aaPredicted RBP15.55■□□□□ 0.08
VMP1-202ENST00000585847 ANKRD2Q9GZV1 360 aa15.55■□□□□ 0.08
VMP1-202ENST00000585847 ARAP2Q8WZ64 1704 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms