RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 MED23Q9ULK4 1368 aa10.93□□□□□ -0.66
ATG4D-202ENST00000585437 IQCA1LA6NCM1 817 aa10.93□□□□□ -0.66
ATG4D-202ENST00000585437 YDJCA8MPS7 323 aa10.93□□□□□ -0.66
ATG4D-202ENST00000585437 NEFLP07196 543 aa10.93□□□□□ -0.66
ATG4D-202ENST00000585437 ITGA6P23229 1130 aa10.93□□□□□ -0.66
ATG4D-202ENST00000585437 SCNN1DP51172 638 aa10.93□□□□□ -0.66
ATG4D-202ENST00000585437 RARSP54136 660 aaKnown RBP10.93□□□□□ -0.66
ATG4D-202ENST00000585437 EPHA10Q5JZY3 1008 aa10.93□□□□□ -0.66
ATG4D-202ENST00000585437 SLC4A10Q6U841 1118 aa10.93□□□□□ -0.66
ATG4D-202ENST00000585437 C16orf71Q8IYS4 520 aaPredicted RBP10.93□□□□□ -0.66
ATG4D-202ENST00000585437 ZNRF3Q9ULT6 936 aa10.93□□□□□ -0.66
ATG4D-202ENST00000585437 KIF16BQ96L93 1317 aa10.92□□□□□ -0.66
ATG4D-202ENST00000585437 NBPF7P0C2Y1 421 aaPredicted RBP10.92□□□□□ -0.66
ATG4D-202ENST00000585437 EIF6P56537 245 aaKnown RBP10.92□□□□□ -0.66
ATG4D-202ENST00000585437 CXCL9Q07325 125 aa10.92□□□□□ -0.66
ATG4D-202ENST00000585437 WASHC4Q2M389 1173 aa10.92□□□□□ -0.66
ATG4D-202ENST00000585437 SMC1BQ8NDV3 1235 aa10.92□□□□□ -0.66
ATG4D-202ENST00000585437 TAF1DQ9H5J8 278 aaPredicted RBP10.92□□□□□ -0.66
ATG4D-202ENST00000585437 UFL1O94874 794 aa10.91□□□□□ -0.66
ATG4D-202ENST00000585437 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
ATG4D-202ENST00000585437 POTEJP0CG39 1038 aa10.91□□□□□ -0.66
ATG4D-202ENST00000585437 RABL6Q3YEC7 729 aaPredicted RBP10.91□□□□□ -0.66
ATG4D-202ENST00000585437 SUCLG2Q96I99 432 aa10.91□□□□□ -0.66
ATG4D-202ENST00000585437 EYA3Q99504 573 aa10.91□□□□□ -0.66
ATG4D-202ENST00000585437 C9orf78Q9NZ63 289 aaPredicted RBP10.91□□□□□ -0.66
ATG4D-202ENST00000585437 HACL1Q9UJ83 578 aa10.91□□□□□ -0.66
ATG4D-202ENST00000585437 GGA1Q9UJY5 639 aa10.91□□□□□ -0.66
ATG4D-202ENST00000585437 MINPP1Q9UNW1 487 aa10.91□□□□□ -0.66
ATG4D-202ENST00000585437 IRS2Q9Y4H2 1338 aa10.9□□□□□ -0.66
ATG4D-202ENST00000585437 PCNTO95613 3336 aa10.9□□□□□ -0.66
ATG4D-202ENST00000585437 C6orf229H3BNL8 230 aa10.9□□□□□ -0.66
ATG4D-202ENST00000585437 EPHX2P34913 555 aa10.9□□□□□ -0.66
ATG4D-202ENST00000585437 LMBR1LQ6UX01 489 aa10.9□□□□□ -0.66
ATG4D-202ENST00000585437 ARHGAP45Q92619 1136 aa10.9□□□□□ -0.66
ATG4D-202ENST00000585437 GPR101Q96P66 508 aaPredicted RBP10.9□□□□□ -0.66
ATG4D-202ENST00000585437 USP44Q9H0E7 712 aa10.9□□□□□ -0.66
ATG4D-202ENST00000585437 ANKIB1Q9P2G1 1089 aa10.9□□□□□ -0.66
ATG4D-202ENST00000585437 POLR2AP24928 1970 aaKnown RBP10.9□□□□□ -0.66
ATG4D-202ENST00000585437 THSD7BQ9C0I4 1608 aa10.89□□□□□ -0.67
ATG4D-202ENST00000585437 ANKRD18BA2A2Z9 1011 aa10.89□□□□□ -0.67
ATG4D-202ENST00000585437 ECE2O60344 883 aa10.89□□□□□ -0.67
ATG4D-202ENST00000585437 ATP2B4P23634 1241 aa10.89□□□□□ -0.67
ATG4D-202ENST00000585437 IGHMBP2P38935 993 aaKnown RBP10.89□□□□□ -0.67
ATG4D-202ENST00000585437 CCT4P50991 539 aaKnown RBP10.89□□□□□ -0.67
ATG4D-202ENST00000585437 IFIT5Q13325 482 aaKnown RBP10.89□□□□□ -0.67
ATG4D-202ENST00000585437 CIAPIN1Q6FI81 312 aa10.89□□□□□ -0.67
ATG4D-202ENST00000585437 LDHDQ86WU2 507 aa10.89□□□□□ -0.67
ATG4D-202ENST00000585437 ANKRD44Q8N8A2 993 aa10.89□□□□□ -0.67
ATG4D-202ENST00000585437 API5Q9BZZ5 524 aaKnown RBP10.89□□□□□ -0.67
ATG4D-202ENST00000585437 DBNDD1Q9H9R9 158 aa10.89□□□□□ -0.67
ATG4D-202ENST00000585437 GPRC5DQ9NZD1 345 aa10.89□□□□□ -0.67
ATG4D-202ENST00000585437 NOB1Q9ULX3 412 aaKnown RBP10.89□□□□□ -0.67
ATG4D-202ENST00000585437 GJA3Q9Y6H8 435 aa10.89□□□□□ -0.67
ATG4D-202ENST00000585437 WTIPA6NIX2 430 aaPredicted RBP10.88□□□□□ -0.67
ATG4D-202ENST00000585437 RIMBP2O15034 1052 aa10.88□□□□□ -0.67
ATG4D-202ENST00000585437 APLP1P51693 650 aa10.88□□□□□ -0.67
ATG4D-202ENST00000585437 TNIP1Q15025 636 aa10.88□□□□□ -0.67
ATG4D-202ENST00000585437 CHADLQ6NUI6 762 aa10.88□□□□□ -0.67
ATG4D-202ENST00000585437 PNMA8AQ86V59 439 aaPredicted RBP10.88□□□□□ -0.67
ATG4D-202ENST00000585437 MPHOSPH8Q99549 860 aa10.88□□□□□ -0.67
ATG4D-202ENST00000585437 ANKRD2Q9GZV1 360 aa10.88□□□□□ -0.67
ATG4D-202ENST00000585437 BICC1Q9H694 974 aaKnown RBP10.88□□□□□ -0.67
ATG4D-202ENST00000585437 PASKQ96RG2 1323 aa10.87□□□□□ -0.67
ATG4D-202ENST00000585437 PSMD14O00487 310 aa10.87□□□□□ -0.67
ATG4D-202ENST00000585437 RAD17O75943 681 aa10.87□□□□□ -0.67
ATG4D-202ENST00000585437 LMOD1P29536 600 aaPredicted RBP10.87□□□□□ -0.67
ATG4D-202ENST00000585437 EPS15P42566 896 aa10.87□□□□□ -0.67
ATG4D-202ENST00000585437 GMPSP49915 693 aaPredicted RBP10.87□□□□□ -0.67
ATG4D-202ENST00000585437 CHRNDQ07001 517 aa10.87□□□□□ -0.67
ATG4D-202ENST00000585437 CCDC57Q2TAC2 916 aa10.87□□□□□ -0.67
ATG4D-202ENST00000585437 INTS3Q68E01 1043 aaKnown RBP10.87□□□□□ -0.67
ATG4D-202ENST00000585437 C15orf52Q6ZUT6 534 aaKnown RBP10.87□□□□□ -0.67
ATG4D-202ENST00000585437 DPF2Q92785 391 aa10.87□□□□□ -0.67
ATG4D-202ENST00000585437 ZC3H12CQ9C0D7 883 aaKnown RBP10.87□□□□□ -0.67
ATG4D-202ENST00000585437 LEMD3Q9Y2U8 911 aa10.87□□□□□ -0.67
ATG4D-202ENST00000585437 ZNF804BA4D1E1 1349 aa10.86□□□□□ -0.67
ATG4D-202ENST00000585437 BCAR3O75815 825 aa10.86□□□□□ -0.67
ATG4D-202ENST00000585437 ITGBL1O95965 494 aaPredicted RBP10.86□□□□□ -0.67
ATG4D-202ENST00000585437 TRIM27P14373 513 aa10.86□□□□□ -0.67
ATG4D-202ENST00000585437 RPS12P25398 132 aaKnown RBP10.86□□□□□ -0.67
ATG4D-202ENST00000585437 KLRK1P26718 216 aa10.86□□□□□ -0.67
ATG4D-202ENST00000585437 DOK7Q18PE1 504 aa10.86□□□□□ -0.67
ATG4D-202ENST00000585437 USP50Q70EL3 339 aaPredicted RBP10.86□□□□□ -0.67
ATG4D-202ENST00000585437 PODNQ7Z5L7 613 aa10.86□□□□□ -0.67
ATG4D-202ENST00000585437 TXNRD3Q86VQ6 643 aa10.86□□□□□ -0.67
ATG4D-202ENST00000585437 ZNF594Q96JF6 807 aaPredicted RBP10.86□□□□□ -0.67
ATG4D-202ENST00000585437 KCNQ5Q9NR82 932 aa10.86□□□□□ -0.67
ATG4D-202ENST00000585437 ADARB2Q9NS39 739 aaKnown RBP10.86□□□□□ -0.67
ATG4D-202ENST00000585437 SUPT16HQ9Y5B9 1047 aaKnown RBP10.86□□□□□ -0.67
ATG4D-202ENST00000585437 VIL1P09327 827 aaKnown RBP10.85□□□□□ -0.67
ATG4D-202ENST00000585437 ATF7IPQ6VMQ6 1270 aa10.85□□□□□ -0.67
ATG4D-202ENST00000585437 GMLQ99445 158 aa10.85□□□□□ -0.67
ATG4D-202ENST00000585437 PGAP2Q9UHJ9 254 aa10.85□□□□□ -0.67
ATG4D-202ENST00000585437 CHMP3Q9Y3E7 222 aa10.85□□□□□ -0.67
ATG4D-202ENST00000585437 RFX5P48382 616 aaPredicted RBP10.84□□□□□ -0.67
ATG4D-202ENST00000585437 EAPPQ56P03 285 aaPredicted RBP10.84□□□□□ -0.67
ATG4D-202ENST00000585437 LDHAL6AQ6ZMR3 332 aa10.84□□□□□ -0.67
ATG4D-202ENST00000585437 DNAJC5GQ8N7S2 189 aa10.84□□□□□ -0.67
ATG4D-202ENST00000585437 VGLL2Q8N8G2 317 aa10.84□□□□□ -0.67
ATG4D-202ENST00000585437 MEIS3Q99687 375 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms