RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 THSD7BQ9C0I4 1608 aa18.78■□□□□ 0.6
SDF2-202ENST00000585428 ECE2O60344 883 aa18.77■□□□□ 0.6
SDF2-202ENST00000585428 TBC1D10BQ4KMP7 808 aaPredicted RBP18.77■□□□□ 0.6
SDF2-202ENST00000585428 ZC3H12CQ9C0D7 883 aaKnown RBP18.77■□□□□ 0.6
SDF2-202ENST00000585428 SEC31BQ9NQW1 1179 aa18.77■□□□□ 0.6
SDF2-202ENST00000585428 RTL9Q8NET4 1388 aa18.77■□□□□ 0.6
SDF2-202ENST00000585428 TAF1P21675 1872 aa18.76■□□□□ 0.59
SDF2-202ENST00000585428 TRPM7Q96QT4 1865 aa18.76■□□□□ 0.59
SDF2-202ENST00000585428 CCDC191Q8NCU4 936 aa18.76■□□□□ 0.59
SDF2-202ENST00000585428 ZIC5Q96T25 663 aa18.76■□□□□ 0.59
SDF2-202ENST00000585428 IFT57Q9NWB7 429 aa18.76■□□□□ 0.59
SDF2-202ENST00000585428 ELL2O00472 640 aaPredicted RBP18.75■□□□□ 0.59
SDF2-202ENST00000585428 APAF1O14727 1248 aa18.75■□□□□ 0.59
SDF2-202ENST00000585428 HSP90B1P14625 803 aaKnown RBP18.75■□□□□ 0.59
SDF2-202ENST00000585428 GNAI1P63096 354 aa18.75■□□□□ 0.59
SDF2-202ENST00000585428 GOLGA2Q08379 1002 aa18.75■□□□□ 0.59
SDF2-202ENST00000585428 NOGQ13253 232 aa18.75■□□□□ 0.59
SDF2-202ENST00000585428 KRT26Q7Z3Y9 468 aa18.75■□□□□ 0.59
SDF2-202ENST00000585428 PRKRIP1Q9H875 184 aaPredicted RBP18.75■□□□□ 0.59
SDF2-202ENST00000585428 COL4A1P02462 1669 aa18.74■□□□□ 0.59
SDF2-202ENST00000585428 FAM155AB1AL88 458 aaPredicted RBP18.74■□□□□ 0.59
SDF2-202ENST00000585428 PCCAP05165 728 aaPredicted RBP18.74■□□□□ 0.59
SDF2-202ENST00000585428 RGS19P49795 217 aa18.74■□□□□ 0.59
SDF2-202ENST00000585428 HUNKP57058 714 aa18.74■□□□□ 0.59
SDF2-202ENST00000585428 RBM26Q5T8P6 1007 aaKnown RBP18.74■□□□□ 0.59
SDF2-202ENST00000585428 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
SDF2-202ENST00000585428 DCPSQ96C86 337 aaKnown RBP18.74■□□□□ 0.59
SDF2-202ENST00000585428 MYD88Q99836 296 aa18.74■□□□□ 0.59
SDF2-202ENST00000585428 LRRC37AA6NMS7 1700 aa18.74■□□□□ 0.59
SDF2-202ENST00000585428 DDX60Q8IY21 1712 aaKnown RBP18.74■□□□□ 0.59
SDF2-202ENST00000585428 PDE8AO60658 829 aa18.73■□□□□ 0.59
SDF2-202ENST00000585428 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
SDF2-202ENST00000585428 CCDC152Q4G0S7 254 aa18.72■□□□□ 0.59
SDF2-202ENST00000585428 RGMBQ6NW40 437 aa18.72■□□□□ 0.59
SDF2-202ENST00000585428 C2orf69Q8N8R5 385 aa18.72■□□□□ 0.59
SDF2-202ENST00000585428 JARID2Q92833 1246 aaPredicted RBP18.72■□□□□ 0.59
SDF2-202ENST00000585428 METTL22Q9BUU2 404 aaPredicted RBP18.72■□□□□ 0.59
SDF2-202ENST00000585428 GBA2Q9HCG7 927 aaPredicted RBP18.72■□□□□ 0.59
SDF2-202ENST00000585428 ANKIB1Q9P2G1 1089 aa18.72■□□□□ 0.59
SDF2-202ENST00000585428 GGA1Q9UJY5 639 aa18.72■□□□□ 0.59
SDF2-202ENST00000585428 CCDC85CA6NKD9 419 aa18.71■□□□□ 0.59
SDF2-202ENST00000585428 ADM5C9JUS6 153 aa18.71■□□□□ 0.59
SDF2-202ENST00000585428 UFL1O94874 794 aa18.71■□□□□ 0.59
SDF2-202ENST00000585428 ZNF280AP59817 542 aaPredicted RBP18.71■□□□□ 0.59
SDF2-202ENST00000585428 KIF4BQ2VIQ3 1234 aa18.71■□□□□ 0.59
SDF2-202ENST00000585428 CCDC102AQ96A19 550 aa18.71■□□□□ 0.59
SDF2-202ENST00000585428 CWC25Q9NXE8 425 aaPredicted RBP18.71■□□□□ 0.59
SDF2-202ENST00000585428 AGBL3Q8NEM8 1001 aa18.7■□□□□ 0.58
SDF2-202ENST00000585428 GMLQ99445 158 aa18.7■□□□□ 0.58
SDF2-202ENST00000585428 CHMP4AQ9BY43 222 aa18.7■□□□□ 0.58
SDF2-202ENST00000585428 MCOLN1Q9GZU1 580 aa18.7■□□□□ 0.58
SDF2-202ENST00000585428 CCDC30Q5VVM6 783 aa18.69■□□□□ 0.58
SDF2-202ENST00000585428 RSBN1LQ6PCB5 846 aaPredicted RBP18.69■□□□□ 0.58
SDF2-202ENST00000585428 ASTN2O75129 1339 aaPredicted RBP18.69■□□□□ 0.58
SDF2-202ENST00000585428 G3V3G9 751 aa18.68■□□□□ 0.58
SDF2-202ENST00000585428 DDX58O95786 925 aaKnown RBP18.68■□□□□ 0.58
SDF2-202ENST00000585428 SCARF1Q14162 830 aa18.68■□□□□ 0.58
SDF2-202ENST00000585428 FAM161AQ3B820 660 aa18.68■□□□□ 0.58
SDF2-202ENST00000585428 DCAF8Q5TAQ9 597 aa18.68■□□□□ 0.58
SDF2-202ENST00000585428 ANKRD18AQ8IVF6 992 aa18.68■□□□□ 0.58
SDF2-202ENST00000585428 TSPYL6Q8N831 410 aa18.68■□□□□ 0.58
SDF2-202ENST00000585428 CCDC85AQ96PX6 553 aaPredicted RBP18.68■□□□□ 0.58
SDF2-202ENST00000585428 WTIPA6NIX2 430 aaPredicted RBP18.67■□□□□ 0.58
SDF2-202ENST00000585428 IGKV5-2P06315 115 aa18.67■□□□□ 0.58
SDF2-202ENST00000585428 ATP2B4P23634 1241 aa18.67■□□□□ 0.58
SDF2-202ENST00000585428 ZNF157P51786 506 aaPredicted RBP18.67■□□□□ 0.58
SDF2-202ENST00000585428 KIF23Q02241 960 aaPredicted RBP18.67■□□□□ 0.58
SDF2-202ENST00000585428 KSR2Q6VAB6 950 aa18.67■□□□□ 0.58
SDF2-202ENST00000585428 PODNQ7Z5L7 613 aa18.67■□□□□ 0.58
SDF2-202ENST00000585428 SULF1Q8IWU6 871 aa18.67■□□□□ 0.58
SDF2-202ENST00000585428 TTLL11Q8NHH1 800 aa18.67■□□□□ 0.58
SDF2-202ENST00000585428 GGA3Q9NZ52 723 aa18.67■□□□□ 0.58
SDF2-202ENST00000585428 MAP3K2Q9Y2U5 619 aa18.67■□□□□ 0.58
SDF2-202ENST00000585428 ZNF609O15014 1411 aa18.66■□□□□ 0.58
SDF2-202ENST00000585428 BSDC1Q9NW68 430 aaPredicted RBP18.66■□□□□ 0.58
SDF2-202ENST00000585428 SAGE1Q9NXZ1 904 aa18.66■□□□□ 0.58
SDF2-202ENST00000585428 XDHP47989 1333 aa18.66■□□□□ 0.58
SDF2-202ENST00000585428 PI4KAP2A4QPH2 592 aa18.65■□□□□ 0.58
SDF2-202ENST00000585428 USP17L3A6NCW0 530 aa18.65■□□□□ 0.58
SDF2-202ENST00000585428 USP17L4A6NCW7 530 aa18.65■□□□□ 0.58
SDF2-202ENST00000585428 USP17L8P0C7I0 530 aa18.65■□□□□ 0.58
SDF2-202ENST00000585428 MLLT1Q03111 559 aaPredicted RBP18.65■□□□□ 0.58
SDF2-202ENST00000585428 DGKZQ13574 1117 aa18.65■□□□□ 0.58
SDF2-202ENST00000585428 ANGEL2Q5VTE6 544 aaKnown RBP18.65■□□□□ 0.58
SDF2-202ENST00000585428 USP17L1Q7RTZ2 530 aa18.65■□□□□ 0.58
SDF2-202ENST00000585428 PI4KAP1Q8N8J0 262 aa18.65■□□□□ 0.58
SDF2-202ENST00000585428 CDCA5Q96FF9 252 aa18.65■□□□□ 0.58
SDF2-202ENST00000585428 CSRNP1Q96S65 589 aa18.65■□□□□ 0.58
SDF2-202ENST00000585428 RNF186Q9NXI6 227 aa18.65■□□□□ 0.58
SDF2-202ENST00000585428 MINPP1Q9UNW1 487 aa18.65■□□□□ 0.58
SDF2-202ENST00000585428 SLC10A3P09131 477 aa18.64■□□□□ 0.57
SDF2-202ENST00000585428 CTSWP56202 376 aa18.64■□□□□ 0.57
SDF2-202ENST00000585428 MYOZ2Q9NPC6 264 aa18.64■□□□□ 0.57
SDF2-202ENST00000585428 H7C1W4 665 aa18.63■□□□□ 0.57
SDF2-202ENST00000585428 CDC5LQ99459 802 aaKnown RBP18.63■□□□□ 0.57
SDF2-202ENST00000585428 TRPA1O75762 1119 aa18.62■□□□□ 0.57
SDF2-202ENST00000585428 FKBP1BP68106 108 aa18.62■□□□□ 0.57
SDF2-202ENST00000585428 GREM2Q9H772 168 aa18.62■□□□□ 0.57
SDF2-202ENST00000585428 PITPNM2Q9BZ72 1349 aa18.62■□□□□ 0.57
SDF2-202ENST00000585428 SCN9AQ15858 1988 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms