RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 PTPN12Q05209 780 aaKnown RBP18.11■□□□□ 0.49
SCAMP4-209ENST00000585335 SSH3Q8TE77 659 aa18.11■□□□□ 0.49
SCAMP4-209ENST00000585335 COPRSQ9NQ92 184 aa18.11■□□□□ 0.49
SCAMP4-209ENST00000585335 NSFL1CQ9UNZ2 370 aaKnown RBP18.11■□□□□ 0.49
SCAMP4-209ENST00000585335 MROH5Q6ZUA9 1318 aa18.11■□□□□ 0.49
SCAMP4-209ENST00000585335 LRRC37AA6NMS7 1700 aa18.11■□□□□ 0.49
SCAMP4-209ENST00000585335 XDHP47989 1333 aa18.1■□□□□ 0.49
SCAMP4-209ENST00000585335 EYA2O00167 538 aa18.1■□□□□ 0.49
SCAMP4-209ENST00000585335 CIAO1O76071 339 aa18.1■□□□□ 0.49
SCAMP4-209ENST00000585335 FKBP4Q02790 459 aaKnown RBP eCLIP18.1■□□□□ 0.49
SCAMP4-209ENST00000585335 G3BP1Q13283 466 aaKnown RBP eCLIP18.1■□□□□ 0.49
SCAMP4-209ENST00000585335 POLA2Q14181 598 aa18.1■□□□□ 0.49
SCAMP4-209ENST00000585335 KLHDC4Q8TBB5 520 aa18.1■□□□□ 0.49
SCAMP4-209ENST00000585335 SIL1Q9H173 461 aa18.1■□□□□ 0.49
SCAMP4-209ENST00000585335 TAOK3Q9H2K8 898 aa18.1■□□□□ 0.49
SCAMP4-209ENST00000585335 MINPP1Q9UNW1 487 aa18.1■□□□□ 0.49
SCAMP4-209ENST00000585335 COL4A1P02462 1669 aa18.09■□□□□ 0.49
SCAMP4-209ENST00000585335 IL15P40933 162 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-209ENST00000585335 KCNJ4P48050 445 aa18.09■□□□□ 0.49
SCAMP4-209ENST00000585335 CHRNDQ07001 517 aa18.09■□□□□ 0.49
SCAMP4-209ENST00000585335 OS9Q13438 667 aaPredicted RBP18.09■□□□□ 0.49
SCAMP4-209ENST00000585335 HSP90AB4PQ58FF6 505 aa18.09■□□□□ 0.49
SCAMP4-209ENST00000585335 METTL24Q5JXM2 366 aa18.09■□□□□ 0.49
SCAMP4-209ENST00000585335 OLFM4Q6UX06 510 aa18.09■□□□□ 0.49
SCAMP4-209ENST00000585335 PSMD1Q99460 953 aa18.09■□□□□ 0.49
SCAMP4-209ENST00000585335 PODXL2Q9NZ53 605 aa18.09■□□□□ 0.49
SCAMP4-209ENST00000585335 GGA1Q9UJY5 639 aa18.09■□□□□ 0.49
SCAMP4-209ENST00000585335 LTBP3Q9NS15 1303 aa18.08■□□□□ 0.49
SCAMP4-209ENST00000585335 ATP2B4P23634 1241 aa18.08■□□□□ 0.48
SCAMP4-209ENST00000585335 GPSM2P81274 684 aa18.08■□□□□ 0.48
SCAMP4-209ENST00000585335 EYA3Q99504 573 aa18.08■□□□□ 0.48
SCAMP4-209ENST00000585335 PA2G4Q9UQ80 394 aaKnown RBP18.08■□□□□ 0.48
SCAMP4-209ENST00000585335 C6orf229H3BNL8 230 aa18.07■□□□□ 0.48
SCAMP4-209ENST00000585335 SURF6O75683 361 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-209ENST00000585335 UFL1O94874 794 aa18.07■□□□□ 0.48
SCAMP4-209ENST00000585335 LRRC24Q50LG9 513 aa18.07■□□□□ 0.48
SCAMP4-209ENST00000585335 PUS3Q9BZE2 481 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-209ENST00000585335 LEMD3Q9Y2U8 911 aa18.07■□□□□ 0.48
SCAMP4-209ENST00000585335 RIPOR2Q9Y4F9 1068 aa18.07■□□□□ 0.48
SCAMP4-209ENST00000585335 ERC1Q8IUD2 1116 aa18.06■□□□□ 0.48
SCAMP4-209ENST00000585335 RTFDC1Q9BY42 306 aaPredicted RBP18.06■□□□□ 0.48
SCAMP4-209ENST00000585335 VPS33BQ9H267 617 aa18.06■□□□□ 0.48
SCAMP4-209ENST00000585335 CEP126Q9P2H0 1117 aa18.06■□□□□ 0.48
SCAMP4-209ENST00000585335 FER1L6Q2WGJ9 1857 aa18.05■□□□□ 0.48
SCAMP4-209ENST00000585335 NFKBIEO00221 500 aa18.05■□□□□ 0.48
SCAMP4-209ENST00000585335 TBC1D16Q8TBP0 767 aa18.05■□□□□ 0.48
SCAMP4-209ENST00000585335 NOP58Q9Y2X3 529 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-209ENST00000585335 SNED1Q8TER0 1413 aa18.05■□□□□ 0.48
SCAMP4-209ENST00000585335 ZNF804BA4D1E1 1349 aa18.04■□□□□ 0.48
SCAMP4-209ENST00000585335 LMNB1P20700 586 aa18.04■□□□□ 0.48
SCAMP4-209ENST00000585335 RASSF7Q02833 373 aa18.04■□□□□ 0.48
SCAMP4-209ENST00000585335 ATG9AQ7Z3C6 839 aa18.04■□□□□ 0.48
SCAMP4-209ENST00000585335 SIRT2Q8IXJ6 389 aa18.04■□□□□ 0.48
SCAMP4-209ENST00000585335 HELBQ8NG08 1087 aaPredicted RBP18.04■□□□□ 0.48
SCAMP4-209ENST00000585335 PCDHB15Q9Y5E8 787 aa18.04■□□□□ 0.48
SCAMP4-209ENST00000585335 PPIP5K2O43314 1243 aa18.03■□□□□ 0.48
SCAMP4-209ENST00000585335 TAF5LO75529 589 aa18.03■□□□□ 0.48
SCAMP4-209ENST00000585335 PDE8BO95263 885 aa18.03■□□□□ 0.48
SCAMP4-209ENST00000585335 UBE4AQ14139 1066 aa18.03■□□□□ 0.48
SCAMP4-209ENST00000585335 PUM3Q15397 648 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-209ENST00000585335 WASHC4Q2M389 1173 aa18.03■□□□□ 0.48
SCAMP4-209ENST00000585335 SLC51AQ86UW1 340 aa18.03■□□□□ 0.48
SCAMP4-209ENST00000585335 ZC3H12CQ9C0D7 883 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-209ENST00000585335 ZNF277Q9NRM2 450 aaPredicted RBP18.03■□□□□ 0.48
SCAMP4-209ENST00000585335 AKAP2Q9Y2D5 859 aa18.03■□□□□ 0.48
SCAMP4-209ENST00000585335 G3V3G9 751 aa18.02■□□□□ 0.48
SCAMP4-209ENST00000585335 RAB11FIP3O75154 756 aa18.02■□□□□ 0.48
SCAMP4-209ENST00000585335 IARSP41252 1262 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-209ENST00000585335 LTBP1Q14766 1721 aa18.02■□□□□ 0.48
SCAMP4-209ENST00000585335 DCAF8Q5TAQ9 597 aa18.02■□□□□ 0.48
SCAMP4-209ENST00000585335 RWDD1Q9H446 243 aaPredicted RBP18.02■□□□□ 0.48
SCAMP4-209ENST00000585335 POLLQ9UGP5 575 aa18.02■□□□□ 0.48
SCAMP4-209ENST00000585335 EXOC6BQ9Y2D4 811 aa18.02■□□□□ 0.48
SCAMP4-209ENST00000585335 IFIT1P09914 478 aaKnown RBP18.01■□□□□ 0.47
SCAMP4-209ENST00000585335 SLC5A1P13866 664 aa18.01■□□□□ 0.47
SCAMP4-209ENST00000585335 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
SCAMP4-209ENST00000585335 LARGE2Q8N3Y3 721 aa18.01■□□□□ 0.47
SCAMP4-209ENST00000585335 JDP2Q8WYK2 163 aa18.01■□□□□ 0.47
SCAMP4-209ENST00000585335 A0A1B0GUL6 1792 aa18.01■□□□□ 0.47
SCAMP4-209ENST00000585335 MED23Q9ULK4 1368 aa18.01■□□□□ 0.47
SCAMP4-209ENST00000585335 DUOX1Q9NRD9 1551 aa18■□□□□ 0.47
SCAMP4-209ENST00000585335 KIAA2012Q0VF49 1180 aa18■□□□□ 0.47
SCAMP4-209ENST00000585335 TFCP2Q12800 502 aa18■□□□□ 0.47
SCAMP4-209ENST00000585335 ATP2B3Q16720 1220 aa18■□□□□ 0.47
SCAMP4-209ENST00000585335 AOC3Q16853 763 aa18■□□□□ 0.47
SCAMP4-209ENST00000585335 NIM1KQ8IY84 436 aa18■□□□□ 0.47
SCAMP4-209ENST00000585335 VGLL2Q8N8G2 317 aa18■□□□□ 0.47
SCAMP4-209ENST00000585335 LPIN2Q92539 896 aa18■□□□□ 0.47
SCAMP4-209ENST00000585335 KIF1BPQ96EK5 621 aa18■□□□□ 0.47
SCAMP4-209ENST00000585335 RNF181Q9P0P0 153 aa18■□□□□ 0.47
SCAMP4-209ENST00000585335 RIMBP2O15034 1052 aa17.99■□□□□ 0.47
SCAMP4-209ENST00000585335 C9orf131Q5VYM1 1079 aa17.99■□□□□ 0.47
SCAMP4-209ENST00000585335 ZBTB47Q9UFB7 747 aaPredicted RBP17.99■□□□□ 0.47
SCAMP4-209ENST00000585335 CAVIN4Q5BKX8 364 aa17.98■□□□□ 0.47
SCAMP4-209ENST00000585335 C15orf52Q6ZUT6 534 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-209ENST00000585335 ZNF804AQ7Z570 1209 aa17.98■□□□□ 0.47
SCAMP4-209ENST00000585335 DCTPP1Q9H773 170 aa17.98■□□□□ 0.47
SCAMP4-209ENST00000585335 ZC3H4Q9UPT8 1303 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-209ENST00000585335 APBB1O00213 710 aa17.97■□□□□ 0.47
SCAMP4-209ENST00000585335 SASH1O94885 1247 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms