RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 KRT24Q2M2I5 525 aa13.89□□□□□ -0.19
CSNK1D-226ENST00000585026 CCDC146Q8IYE0 955 aa13.89□□□□□ -0.19
CSNK1D-226ENST00000585026 SAGE1Q9NXZ1 904 aa13.89□□□□□ -0.19
CSNK1D-226ENST00000585026 POLLQ9UGP5 575 aa13.89□□□□□ -0.19
CSNK1D-226ENST00000585026 MYBBP1AQ9BQG0 1328 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-226ENST00000585026 SHTN1A0MZ66 631 aa13.88□□□□□ -0.19
CSNK1D-226ENST00000585026 ZNF157P51786 506 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-226ENST00000585026 DOK7Q18PE1 504 aa13.88□□□□□ -0.19
CSNK1D-226ENST00000585026 KIF4BQ2VIQ3 1234 aa13.88□□□□□ -0.19
CSNK1D-226ENST00000585026 RIC3Q7Z5B4 369 aa13.88□□□□□ -0.19
CSNK1D-226ENST00000585026 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-226ENST00000585026 ZBTB38Q8NAP3 1195 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-226ENST00000585026 TBC1D16Q8TBP0 767 aa13.88□□□□□ -0.19
CSNK1D-226ENST00000585026 PODXL2Q9NZ53 605 aa13.88□□□□□ -0.19
CSNK1D-226ENST00000585026 ANKIB1Q9P2G1 1089 aa13.88□□□□□ -0.19
CSNK1D-226ENST00000585026 ANKRD36CQ5JPF3 1778 aa13.88□□□□□ -0.19
CSNK1D-226ENST00000585026 VIL1P09327 827 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-226ENST00000585026 CALD1Q05682 793 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-226ENST00000585026 CCDC152Q4G0S7 254 aa13.87□□□□□ -0.19
CSNK1D-226ENST00000585026 RTL5Q5HYW3 569 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-226ENST00000585026 DUSP27Q5VZP5 1158 aa13.87□□□□□ -0.19
CSNK1D-226ENST00000585026 GGA1Q9UJY5 639 aa13.87□□□□□ -0.19
CSNK1D-226ENST00000585026 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
CSNK1D-226ENST00000585026 UFL1O94874 794 aa13.86□□□□□ -0.19
CSNK1D-226ENST00000585026 SLC34A2O95436 690 aa13.86□□□□□ -0.19
CSNK1D-226ENST00000585026 KIF23Q02241 960 aaPredicted RBP13.86□□□□□ -0.19
CSNK1D-226ENST00000585026 AGBL3Q8NEM8 1001 aa13.86□□□□□ -0.19
CSNK1D-226ENST00000585026 ZNF428Q96B54 188 aa13.86□□□□□ -0.19
CSNK1D-226ENST00000585026 GGA3Q9NZ52 723 aa13.86□□□□□ -0.19
CSNK1D-226ENST00000585026 ADM5C9JUS6 153 aa13.85□□□□□ -0.19
CSNK1D-226ENST00000585026 FKBP1BP68106 108 aa13.85□□□□□ -0.19
CSNK1D-226ENST00000585026 CCDC191Q8NCU4 936 aa13.85□□□□□ -0.19
CSNK1D-226ENST00000585026 DUOX1Q9NRD9 1551 aa13.84□□□□□ -0.19
CSNK1D-226ENST00000585026 FAM155AB1AL88 458 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-226ENST00000585026 PDE8AO60658 829 aa13.84□□□□□ -0.19
CSNK1D-226ENST00000585026 DDX58O95786 925 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-226ENST00000585026 PCCAP05165 728 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-226ENST00000585026 ZIC5Q96T25 663 aa13.84□□□□□ -0.19
CSNK1D-226ENST00000585026 KCNQ5Q9NR82 932 aa13.84□□□□□ -0.19
CSNK1D-226ENST00000585026 RTL9Q8NET4 1388 aa13.83□□□□□ -0.19
CSNK1D-226ENST00000585026 TRPA1O75762 1119 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 EGFRP00533 1210 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 SLC10A3P09131 477 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 ATP2B4P23634 1241 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 ZNF280AP59817 542 aaPredicted RBP13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 GNAI1P63096 354 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 RSBN1LQ6PCB5 846 aaPredicted RBP13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 PODNQ7Z5L7 613 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 ANKRD18AQ8IVF6 992 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 MBIPQ9NS73 344 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 CWC25Q9NXE8 425 aaPredicted RBP13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 RNF186Q9NXI6 227 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 ADAMTS8Q9UP79 889 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 XDHP47989 1333 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 LAMB2P55268 1798 aa13.83□□□□□ -0.2
CSNK1D-226ENST00000585026 LRRC37AA6NMS7 1700 aa13.82□□□□□ -0.2
CSNK1D-226ENST00000585026 USP17L8P0C7I0 530 aa13.82□□□□□ -0.2
CSNK1D-226ENST00000585026 SCARF1Q14162 830 aa13.82□□□□□ -0.2
CSNK1D-226ENST00000585026 DLK2Q6UY11 383 aa13.82□□□□□ -0.2
CSNK1D-226ENST00000585026 CDCA5Q96FF9 252 aa13.82□□□□□ -0.2
CSNK1D-226ENST00000585026 CDC5LQ99459 802 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-226ENST00000585026 MYD88Q99836 296 aa13.82□□□□□ -0.2
CSNK1D-226ENST00000585026 SEC31BQ9NQW1 1179 aa13.82□□□□□ -0.2
CSNK1D-226ENST00000585026 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
CSNK1D-226ENST00000585026 USP17L3A6NCW0 530 aa13.81□□□□□ -0.2
CSNK1D-226ENST00000585026 USP17L4A6NCW7 530 aa13.81□□□□□ -0.2
CSNK1D-226ENST00000585026 ANGEL2Q5VTE6 544 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-226ENST00000585026 CCDC30Q5VVM6 783 aa13.81□□□□□ -0.2
CSNK1D-226ENST00000585026 USP17L1Q7RTZ2 530 aa13.81□□□□□ -0.2
CSNK1D-226ENST00000585026 PITPNM2Q9BZ72 1349 aa13.81□□□□□ -0.2
CSNK1D-226ENST00000585026 ZNF609O15014 1411 aa13.81□□□□□ -0.2
CSNK1D-226ENST00000585026 ZNF853P0CG23 659 aa13.8□□□□□ -0.2
CSNK1D-226ENST00000585026 NF2P35240 595 aa13.8□□□□□ -0.2
CSNK1D-226ENST00000585026 MMP14P50281 582 aa13.8□□□□□ -0.2
CSNK1D-226ENST00000585026 OGFOD1Q8N543 542 aa13.8□□□□□ -0.2
CSNK1D-226ENST00000585026 CSRNP1Q96S65 589 aa13.8□□□□□ -0.2
CSNK1D-226ENST00000585026 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-226ENST00000585026 PHAXQ9H814 394 aaKnown RBP13.8□□□□□ -0.2
CSNK1D-226ENST00000585026 MYOZ2Q9NPC6 264 aa13.8□□□□□ -0.2
CSNK1D-226ENST00000585026 CASP8AP2Q9UKL3 1982 aa13.8□□□□□ -0.2
CSNK1D-226ENST00000585026 ELL2O00472 640 aaPredicted RBP13.79□□□□□ -0.2
CSNK1D-226ENST00000585026 NEXNQ0ZGT2 675 aa13.79□□□□□ -0.2
CSNK1D-226ENST00000585026 CTU1Q7Z7A3 348 aaKnown RBP13.79□□□□□ -0.2
CSNK1D-226ENST00000585026 PKN2Q16513 984 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-226ENST00000585026 RASAL3Q86YV0 1011 aa13.78□□□□□ -0.2
CSNK1D-226ENST00000585026 CCDC85AQ96PX6 553 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-226ENST00000585026 MYO3BQ8WXR4 1341 aa13.78□□□□□ -0.2
CSNK1D-226ENST00000585026 DDX60Q8IY21 1712 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-226ENST00000585026 ASTN2O75129 1339 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-226ENST00000585026 TAF1P21675 1872 aa13.77□□□□□ -0.21
CSNK1D-226ENST00000585026 CTSWP56202 376 aa13.77□□□□□ -0.21
CSNK1D-226ENST00000585026 TTLL12Q14166 644 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-226ENST00000585026 GMLQ99445 158 aa13.77□□□□□ -0.21
CSNK1D-226ENST00000585026 BSDC1Q9NW68 430 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-226ENST00000585026 PCDH10Q9P2E7 1040 aa13.77□□□□□ -0.21
CSNK1D-226ENST00000585026 HDAC9Q9UKV0 1011 aa13.77□□□□□ -0.21
CSNK1D-226ENST00000585026 APAF1O14727 1248 aa13.76□□□□□ -0.21
CSNK1D-226ENST00000585026 KSR2Q6VAB6 950 aa13.76□□□□□ -0.21
CSNK1D-226ENST00000585026 STK31Q9BXU1 1019 aa13.76□□□□□ -0.21
CSNK1D-226ENST00000585026 COA1Q9GZY4 146 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms