RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 HYPKQ9NX55 129 aa13.52□□□□□ -0.25
CASC3-210ENST00000584997 COL4A1P02462 1669 aa13.51□□□□□ -0.25
CASC3-210ENST00000584997 RTL9Q8NET4 1388 aa13.51□□□□□ -0.25
CASC3-210ENST00000584997 EGFRP00533 1210 aa13.51□□□□□ -0.25
CASC3-210ENST00000584997 KIF4BQ2VIQ3 1234 aa13.51□□□□□ -0.25
CASC3-210ENST00000584997 RUNDC1Q96C34 613 aa13.51□□□□□ -0.25
CASC3-210ENST00000584997 TRIM35Q9UPQ4 493 aa13.51□□□□□ -0.25
CASC3-210ENST00000584997 SCN9AQ15858 1988 aa13.51□□□□□ -0.25
CASC3-210ENST00000584997 AKAP11Q9UKA4 1901 aa13.51□□□□□ -0.25
CASC3-210ENST00000584997 MYBBP1AQ9BQG0 1328 aaKnown RBP13.5□□□□□ -0.25
CASC3-210ENST00000584997 ADM5C9JUS6 153 aa13.5□□□□□ -0.25
CASC3-210ENST00000584997 SLC34A2O95436 690 aa13.5□□□□□ -0.25
CASC3-210ENST00000584997 RPS8P62241 208 aaKnown RBP13.5□□□□□ -0.25
CASC3-210ENST00000584997 RIC3Q7Z5B4 369 aa13.5□□□□□ -0.25
CASC3-210ENST00000584997 SULF1Q8IWU6 871 aa13.5□□□□□ -0.25
CASC3-210ENST00000584997 TBC1D16Q8TBP0 767 aa13.5□□□□□ -0.25
CASC3-210ENST00000584997 CCDC102AQ96A19 550 aa13.5□□□□□ -0.25
CASC3-210ENST00000584997 ZC3H12CQ9C0D7 883 aaKnown RBP13.5□□□□□ -0.25
CASC3-210ENST00000584997 KCNQ5Q9NR82 932 aa13.5□□□□□ -0.25
CASC3-210ENST00000584997 UFL1O94874 794 aa13.49□□□□□ -0.25
CASC3-210ENST00000584997 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
CASC3-210ENST00000584997 ZNF157P51786 506 aaPredicted RBP13.49□□□□□ -0.25
CASC3-210ENST00000584997 GOLGA2Q08379 1002 aa13.49□□□□□ -0.25
CASC3-210ENST00000584997 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
CASC3-210ENST00000584997 GGA3Q9NZ52 723 aa13.49□□□□□ -0.25
CASC3-210ENST00000584997 ANKIB1Q9P2G1 1089 aa13.49□□□□□ -0.25
CASC3-210ENST00000584997 PDE4DIPQ5VU43 2346 aa13.48□□□□□ -0.25
CASC3-210ENST00000584997 FAM155AB1AL88 458 aaPredicted RBP13.48□□□□□ -0.25
CASC3-210ENST00000584997 TRIM28Q13263 835 aaKnown RBP13.48□□□□□ -0.25
CASC3-210ENST00000584997 ZBTB38Q8NAP3 1195 aaPredicted RBP13.48□□□□□ -0.25
CASC3-210ENST00000584997 SAGE1Q9NXZ1 904 aa13.48□□□□□ -0.25
CASC3-210ENST00000584997 PODXL2Q9NZ53 605 aa13.48□□□□□ -0.25
CASC3-210ENST00000584997 GGA1Q9UJY5 639 aa13.48□□□□□ -0.25
CASC3-210ENST00000584997 VIL1P09327 827 aaKnown RBP13.47□□□□□ -0.25
CASC3-210ENST00000584997 KIF23Q02241 960 aaPredicted RBP13.47□□□□□ -0.25
CASC3-210ENST00000584997 CCDC152Q4G0S7 254 aa13.47□□□□□ -0.25
CASC3-210ENST00000584997 SEC31BQ9NQW1 1179 aa13.47□□□□□ -0.25
CASC3-210ENST00000584997 MBIPQ9NS73 344 aa13.47□□□□□ -0.25
CASC3-210ENST00000584997 PSME4Q14997 1843 aa13.47□□□□□ -0.25
CASC3-210ENST00000584997 TRPA1O75762 1119 aa13.46□□□□□ -0.25
CASC3-210ENST00000584997 SLC10A3P09131 477 aa13.46□□□□□ -0.25
CASC3-210ENST00000584997 CDCA5Q96FF9 252 aa13.46□□□□□ -0.25
CASC3-210ENST00000584997 MYD88Q99836 296 aa13.46□□□□□ -0.25
CASC3-210ENST00000584997 ADAMTS8Q9UP79 889 aa13.46□□□□□ -0.25
CASC3-210ENST00000584997 ANGEL2Q5VTE6 544 aaKnown RBP13.45□□□□□ -0.26
CASC3-210ENST00000584997 CCDC191Q8NCU4 936 aa13.45□□□□□ -0.26
CASC3-210ENST00000584997 AGBL3Q8NEM8 1001 aa13.45□□□□□ -0.26
CASC3-210ENST00000584997 CCDC85AQ96PX6 553 aaPredicted RBP13.45□□□□□ -0.26
CASC3-210ENST00000584997 PHAXQ9H814 394 aaKnown RBP13.45□□□□□ -0.26
CASC3-210ENST00000584997 RNF186Q9NXI6 227 aa13.45□□□□□ -0.26
CASC3-210ENST00000584997 ASTN2O75129 1339 aaPredicted RBP13.44□□□□□ -0.26
CASC3-210ENST00000584997 XDHP47989 1333 aa13.44□□□□□ -0.26
CASC3-210ENST00000584997 ELL2O00472 640 aaPredicted RBP13.44□□□□□ -0.26
CASC3-210ENST00000584997 PDE8AO60658 829 aa13.44□□□□□ -0.26
CASC3-210ENST00000584997 PCCAP05165 728 aaPredicted RBP13.44□□□□□ -0.26
CASC3-210ENST00000584997 ZNF280AP59817 542 aaPredicted RBP13.44□□□□□ -0.26
CASC3-210ENST00000584997 DDX10Q13206 875 aaKnown RBP13.44□□□□□ -0.26
CASC3-210ENST00000584997 SCARF1Q14162 830 aa13.44□□□□□ -0.26
CASC3-210ENST00000584997 RSBN1LQ6PCB5 846 aaPredicted RBP13.44□□□□□ -0.26
CASC3-210ENST00000584997 ANKRD18AQ8IVF6 992 aa13.44□□□□□ -0.26
CASC3-210ENST00000584997 ZNF609O15014 1411 aa13.44□□□□□ -0.26
CASC3-210ENST00000584997 TNRC18O15417 2968 aaPredicted RBP13.44□□□□□ -0.26
CASC3-210ENST00000584997 PAPPA2Q9BXP8 1791 aa13.43□□□□□ -0.26
CASC3-210ENST00000584997 MYH3P11055 1940 aa13.43□□□□□ -0.26
CASC3-210ENST00000584997 DDX58O95786 925 aaKnown RBP13.43□□□□□ -0.26
CASC3-210ENST00000584997 USP17L8P0C7I0 530 aa13.43□□□□□ -0.26
CASC3-210ENST00000584997 CALD1Q05682 793 aaKnown RBP13.43□□□□□ -0.26
CASC3-210ENST00000584997 CWC25Q9NXE8 425 aaPredicted RBP13.43□□□□□ -0.26
CASC3-210ENST00000584997 SPEF2Q9C093 1822 aa13.43□□□□□ -0.26
CASC3-210ENST00000584997 ZNF853P0CG23 659 aa13.42□□□□□ -0.26
CASC3-210ENST00000584997 ATP2B4P23634 1241 aa13.42□□□□□ -0.26
CASC3-210ENST00000584997 GNAI1P63096 354 aa13.42□□□□□ -0.26
CASC3-210ENST00000584997 FKBP1BP68106 108 aa13.42□□□□□ -0.26
CASC3-210ENST00000584997 RASAL3Q86YV0 1011 aa13.42□□□□□ -0.26
CASC3-210ENST00000584997 REM2Q8IYK8 340 aaPredicted RBP13.42□□□□□ -0.26
CASC3-210ENST00000584997 JARID2Q92833 1246 aaPredicted RBP13.42□□□□□ -0.26
CASC3-210ENST00000584997 CSRNP1Q96S65 589 aa13.42□□□□□ -0.26
CASC3-210ENST00000584997 MYOZ2Q9NPC6 264 aa13.42□□□□□ -0.26
CASC3-210ENST00000584997 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
CASC3-210ENST00000584997 PITPNM2Q9BZ72 1349 aa13.41□□□□□ -0.26
CASC3-210ENST00000584997 USP17L3A6NCW0 530 aa13.41□□□□□ -0.26
CASC3-210ENST00000584997 USP17L4A6NCW7 530 aa13.41□□□□□ -0.26
CASC3-210ENST00000584997 SOX10P56693 466 aa13.41□□□□□ -0.26
CASC3-210ENST00000584997 USP17L1Q7RTZ2 530 aa13.41□□□□□ -0.26
CASC3-210ENST00000584997 PODNQ7Z5L7 613 aa13.41□□□□□ -0.26
CASC3-210ENST00000584997 CTU1Q7Z7A3 348 aaKnown RBP13.41□□□□□ -0.26
CASC3-210ENST00000584997 CDC5LQ99459 802 aaKnown RBP13.41□□□□□ -0.26
CASC3-210ENST00000584997 METTL22Q9BUU2 404 aaPredicted RBP13.41□□□□□ -0.26
CASC3-210ENST00000584997 CHMP4AQ9BY43 222 aa13.41□□□□□ -0.26
CASC3-210ENST00000584997 APAF1O14727 1248 aa13.4□□□□□ -0.26
CASC3-210ENST00000584997 CCDC30Q5VVM6 783 aa13.4□□□□□ -0.26
CASC3-210ENST00000584997 GMLQ99445 158 aa13.4□□□□□ -0.26
CASC3-210ENST00000584997 CTSWP56202 376 aa13.39□□□□□ -0.27
CASC3-210ENST00000584997 TTLL12Q14166 644 aaPredicted RBP13.39□□□□□ -0.27
CASC3-210ENST00000584997 OGFOD1Q8N543 542 aa13.39□□□□□ -0.27
CASC3-210ENST00000584997 FBXW7Q969H0 707 aa13.39□□□□□ -0.27
CASC3-210ENST00000584997 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
CASC3-210ENST00000584997 MAP3K2Q9Y2U5 619 aa13.39□□□□□ -0.27
CASC3-210ENST00000584997 MED23Q9ULK4 1368 aa13.39□□□□□ -0.27
CASC3-210ENST00000584997 NEXNQ0ZGT2 675 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms