RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 COL4A1P02462 1669 aa17.35■□□□□ 0.37
AC055811.3-201ENST00000584952 EGFRP00533 1210 aa17.34■□□□□ 0.37
AC055811.3-201ENST00000584952 PCCAP05165 728 aaPredicted RBP17.34■□□□□ 0.37
AC055811.3-201ENST00000584952 RPS12P25398 132 aaKnown RBP17.34■□□□□ 0.37
AC055811.3-201ENST00000584952 CCDC191Q8NCU4 936 aa17.34■□□□□ 0.37
AC055811.3-201ENST00000584952 RTL9Q8NET4 1388 aa17.34■□□□□ 0.37
AC055811.3-201ENST00000584952 ZC3H12CQ9C0D7 883 aaKnown RBP17.34■□□□□ 0.37
AC055811.3-201ENST00000584952 SEC31BQ9NQW1 1179 aa17.34■□□□□ 0.37
AC055811.3-201ENST00000584952 PODXL2Q9NZ53 605 aa17.34■□□□□ 0.37
AC055811.3-201ENST00000584952 TBC1D10BQ4KMP7 808 aaPredicted RBP17.33■□□□□ 0.36
AC055811.3-201ENST00000584952 ABHD8Q96I13 439 aa17.33■□□□□ 0.36
AC055811.3-201ENST00000584952 CHMP4AQ9BY43 222 aa17.33■□□□□ 0.36
AC055811.3-201ENST00000584952 ANKIB1Q9P2G1 1089 aa17.33■□□□□ 0.36
AC055811.3-201ENST00000584952 PDE8AO60658 829 aa17.32■□□□□ 0.36
AC055811.3-201ENST00000584952 CCDC152Q4G0S7 254 aa17.32■□□□□ 0.36
AC055811.3-201ENST00000584952 RBM26Q5T8P6 1007 aaKnown RBP17.32■□□□□ 0.36
AC055811.3-201ENST00000584952 CCDC30Q5VVM6 783 aa17.32■□□□□ 0.36
AC055811.3-201ENST00000584952 DLK2Q6UY11 383 aa17.32■□□□□ 0.36
AC055811.3-201ENST00000584952 JARID2Q92833 1246 aaPredicted RBP17.32■□□□□ 0.36
AC055811.3-201ENST00000584952 METTL22Q9BUU2 404 aaPredicted RBP17.32■□□□□ 0.36
AC055811.3-201ENST00000584952 CWC25Q9NXE8 425 aaPredicted RBP17.32■□□□□ 0.36
AC055811.3-201ENST00000584952 CA12O43570 354 aa17.31■□□□□ 0.36
AC055811.3-201ENST00000584952 UFL1O94874 794 aa17.31■□□□□ 0.36
AC055811.3-201ENST00000584952 DDX58O95786 925 aaKnown RBP17.31■□□□□ 0.36
AC055811.3-201ENST00000584952 VIL1P09327 827 aaKnown RBP17.31■□□□□ 0.36
AC055811.3-201ENST00000584952 KRT26Q7Z3Y9 468 aa17.31■□□□□ 0.36
AC055811.3-201ENST00000584952 DCPSQ96C86 337 aaKnown RBP17.31■□□□□ 0.36
AC055811.3-201ENST00000584952 TSKSQ9UJT2 592 aa17.31■□□□□ 0.36
AC055811.3-201ENST00000584952 G3V3G9 751 aa17.3■□□□□ 0.36
AC055811.3-201ENST00000584952 BRPF1P55201 1214 aaPredicted RBP17.3■□□□□ 0.36
AC055811.3-201ENST00000584952 DCAF8Q5TAQ9 597 aa17.3■□□□□ 0.36
AC055811.3-201ENST00000584952 TSPYL6Q8N831 410 aa17.3■□□□□ 0.36
AC055811.3-201ENST00000584952 CCDC85AQ96PX6 553 aaPredicted RBP17.3■□□□□ 0.36
AC055811.3-201ENST00000584952 GGA1Q9UJY5 639 aa17.3■□□□□ 0.36
AC055811.3-201ENST00000584952 HUNKP57058 714 aa17.29■□□□□ 0.36
AC055811.3-201ENST00000584952 MAP3K2Q9Y2U5 619 aa17.29■□□□□ 0.36
AC055811.3-201ENST00000584952 NOGQ13253 232 aa17.28■□□□□ 0.36
AC055811.3-201ENST00000584952 KIF4BQ2VIQ3 1234 aa17.28■□□□□ 0.36
AC055811.3-201ENST00000584952 KSR2Q6VAB6 950 aa17.28■□□□□ 0.36
AC055811.3-201ENST00000584952 ANKRD18AQ8IVF6 992 aa17.28■□□□□ 0.36
AC055811.3-201ENST00000584952 PI4KAP2A4QPH2 592 aa17.27■□□□□ 0.36
AC055811.3-201ENST00000584952 ADM5C9JUS6 153 aa17.27■□□□□ 0.36
AC055811.3-201ENST00000584952 PI4KAP1Q8N8J0 262 aa17.27■□□□□ 0.36
AC055811.3-201ENST00000584952 C2orf69Q8N8R5 385 aa17.27■□□□□ 0.36
AC055811.3-201ENST00000584952 TSR2Q969E8 191 aaKnown RBP17.27■□□□□ 0.36
AC055811.3-201ENST00000584952 GBA2Q9HCG7 927 aaPredicted RBP17.27■□□□□ 0.36
AC055811.3-201ENST00000584952 XDHP47989 1333 aa17.26■□□□□ 0.35
AC055811.3-201ENST00000584952 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
AC055811.3-201ENST00000584952 ZNF280AP59817 542 aaPredicted RBP17.26■□□□□ 0.35
AC055811.3-201ENST00000584952 RGMBQ6NW40 437 aa17.26■□□□□ 0.35
AC055811.3-201ENST00000584952 AGBL3Q8NEM8 1001 aa17.26■□□□□ 0.35
AC055811.3-201ENST00000584952 ZIC5Q96T25 663 aa17.26■□□□□ 0.35
AC055811.3-201ENST00000584952 ATP2B4P23634 1241 aa17.25■□□□□ 0.35
AC055811.3-201ENST00000584952 CTSWP56202 376 aa17.25■□□□□ 0.35
AC055811.3-201ENST00000584952 RSBN1LQ6PCB5 846 aaPredicted RBP17.25■□□□□ 0.35
AC055811.3-201ENST00000584952 SULF1Q8IWU6 871 aa17.25■□□□□ 0.35
AC055811.3-201ENST00000584952 TTLL11Q8NHH1 800 aa17.25■□□□□ 0.35
AC055811.3-201ENST00000584952 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
AC055811.3-201ENST00000584952 STK31Q9BXU1 1019 aa17.25■□□□□ 0.35
AC055811.3-201ENST00000584952 GGA3Q9NZ52 723 aa17.25■□□□□ 0.35
AC055811.3-201ENST00000584952 ASTN2O75129 1339 aaPredicted RBP17.24■□□□□ 0.35
AC055811.3-201ENST00000584952 NEXNQ0ZGT2 675 aa17.24■□□□□ 0.35
AC055811.3-201ENST00000584952 SCARF1Q14162 830 aa17.24■□□□□ 0.35
AC055811.3-201ENST00000584952 CWF19L2Q2TBE0 894 aaKnown RBP17.24■□□□□ 0.35
AC055811.3-201ENST00000584952 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
AC055811.3-201ENST00000584952 PODNQ7Z5L7 613 aa17.24■□□□□ 0.35
AC055811.3-201ENST00000584952 CCDC102AQ96A19 550 aa17.24■□□□□ 0.35
AC055811.3-201ENST00000584952 GMLQ99445 158 aa17.24■□□□□ 0.35
AC055811.3-201ENST00000584952 SCN9AQ15858 1988 aa17.24■□□□□ 0.35
AC055811.3-201ENST00000584952 ZNF609O15014 1411 aa17.23■□□□□ 0.35
AC055811.3-201ENST00000584952 WTIPA6NIX2 430 aaPredicted RBP17.23■□□□□ 0.35
AC055811.3-201ENST00000584952 FAM155AB1AL88 458 aaPredicted RBP17.23■□□□□ 0.35
AC055811.3-201ENST00000584952 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
AC055811.3-201ENST00000584952 CCDC27Q2M243 656 aa17.23■□□□□ 0.35
AC055811.3-201ENST00000584952 GREM2Q9H772 168 aa17.23■□□□□ 0.35
AC055811.3-201ENST00000584952 BSDC1Q9NW68 430 aaPredicted RBP17.23■□□□□ 0.35
AC055811.3-201ENST00000584952 USP17L3A6NCW0 530 aa17.22■□□□□ 0.35
AC055811.3-201ENST00000584952 USP17L4A6NCW7 530 aa17.22■□□□□ 0.35
AC055811.3-201ENST00000584952 CCDC85CA6NKD9 419 aa17.22■□□□□ 0.35
AC055811.3-201ENST00000584952 ZNF157P51786 506 aaPredicted RBP17.22■□□□□ 0.35
AC055811.3-201ENST00000584952 TWISTNBQ3B726 338 aaPredicted RBP17.22■□□□□ 0.35
AC055811.3-201ENST00000584952 ANGEL2Q5VTE6 544 aaKnown RBP17.22■□□□□ 0.35
AC055811.3-201ENST00000584952 USP17L1Q7RTZ2 530 aa17.22■□□□□ 0.35
AC055811.3-201ENST00000584952 WWC1Q8IX03 1113 aa17.22■□□□□ 0.35
AC055811.3-201ENST00000584952 CDCA5Q96FF9 252 aa17.22■□□□□ 0.35
AC055811.3-201ENST00000584952 MINPP1Q9UNW1 487 aa17.22■□□□□ 0.35
AC055811.3-201ENST00000584952 NEURL1BA8MQ27 555 aa17.21■□□□□ 0.35
AC055811.3-201ENST00000584952 H7C1W4 665 aa17.21■□□□□ 0.35
AC055811.3-201ENST00000584952 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
AC055811.3-201ENST00000584952 G2E3Q7L622 706 aa17.21■□□□□ 0.35
AC055811.3-201ENST00000584952 MYOZ2Q9NPC6 264 aa17.21■□□□□ 0.35
AC055811.3-201ENST00000584952 ZNF316A6NFI3 1004 aaPredicted RBP17.2■□□□□ 0.34
AC055811.3-201ENST00000584952 KIF23Q02241 960 aaPredicted RBP17.2■□□□□ 0.34
AC055811.3-201ENST00000584952 UBE3BQ7Z3V4 1068 aa17.2■□□□□ 0.34
AC055811.3-201ENST00000584952 MCOLN1Q9GZU1 580 aa17.2■□□□□ 0.34
AC055811.3-201ENST00000584952 POLR2AP24928 1970 aaKnown RBP17.2■□□□□ 0.34
AC055811.3-201ENST00000584952 MED23Q9ULK4 1368 aa17.19■□□□□ 0.34
AC055811.3-201ENST00000584952 CCT4P50991 539 aaKnown RBP17.19■□□□□ 0.34
AC055811.3-201ENST00000584952 SAGE1Q9NXZ1 904 aa17.19■□□□□ 0.34
AC055811.3-201ENST00000584952 SLC10A3P09131 477 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms