RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 IL15P40933 162 aaPredicted RBP22.66■■□□□ 1.22
RFFL-211ENST00000584541 TTLL6Q8N841 843 aa22.66■■□□□ 1.22
RFFL-211ENST00000584541 LRRC24Q50LG9 513 aa22.65■■□□□ 1.22
RFFL-211ENST00000584541 CENPQQ7L2Z9 268 aaPredicted RBP22.65■■□□□ 1.22
RFFL-211ENST00000584541 PUS3Q9BZE2 481 aaKnown RBP22.65■■□□□ 1.22
RFFL-211ENST00000584541 ZBTB47Q9UFB7 747 aaPredicted RBP22.65■■□□□ 1.22
RFFL-211ENST00000584541 A0A1B0GUL6 1792 aa22.65■■□□□ 1.22
RFFL-211ENST00000584541 MROH5Q6ZUA9 1318 aa22.64■■□□□ 1.22
RFFL-211ENST00000584541 KCNA3P22001 575 aa22.64■■□□□ 1.21
RFFL-211ENST00000584541 PRPF40BQ6NWY9 871 aaKnown RBP22.64■■□□□ 1.21
RFFL-211ENST00000584541 LRRC37AA6NMS7 1700 aa22.64■■□□□ 1.21
RFFL-211ENST00000584541 METTL24Q5JXM2 366 aa22.63■■□□□ 1.21
RFFL-211ENST00000584541 SMC5Q8IY18 1101 aa22.63■■□□□ 1.21
RFFL-211ENST00000584541 KIF1BPQ96EK5 621 aa22.63■■□□□ 1.21
RFFL-211ENST00000584541 RIPOR2Q9Y4F9 1068 aa22.63■■□□□ 1.21
RFFL-211ENST00000584541 APBB1O00213 710 aa22.62■■□□□ 1.21
RFFL-211ENST00000584541 ATG9AQ7Z3C6 839 aa22.62■■□□□ 1.21
RFFL-211ENST00000584541 SP8Q8IXZ3 490 aa22.62■■□□□ 1.21
RFFL-211ENST00000584541 NLGN2Q8NFZ4 835 aa22.62■■□□□ 1.21
RFFL-211ENST00000584541 ANKRD2Q9GZV1 360 aa22.62■■□□□ 1.21
RFFL-211ENST00000584541 CEP126Q9P2H0 1117 aa22.62■■□□□ 1.21
RFFL-211ENST00000584541 ATP6V0A2Q9Y487 856 aa22.62■■□□□ 1.21
RFFL-211ENST00000584541 DALRD3Q5D0E6 543 aaKnown RBP22.61■■□□□ 1.21
RFFL-211ENST00000584541 SYT17Q9BSW7 474 aa22.61■■□□□ 1.21
RFFL-211ENST00000584541 LRRCC1Q9C099 1032 aa22.61■■□□□ 1.21
RFFL-211ENST00000584541 MINPP1Q9UNW1 487 aa22.61■■□□□ 1.21
RFFL-211ENST00000584541 CHRNDQ07001 517 aa22.6■■□□□ 1.21
RFFL-211ENST00000584541 RHPN1Q8TCX5 695 aa22.6■■□□□ 1.21
RFFL-211ENST00000584541 KDM2BQ8NHM5 1336 aa22.59■■□□□ 1.21
RFFL-211ENST00000584541 ARFGEF1Q9Y6D6 1849 aa22.59■■□□□ 1.21
RFFL-211ENST00000584541 SASH1O94885 1247 aa22.59■■□□□ 1.21
RFFL-211ENST00000584541 ANKRD45Q5TZF3 282 aa22.59■■□□□ 1.21
RFFL-211ENST00000584541 CC2D2BQ6DHV5 1058 aa22.59■■□□□ 1.21
RFFL-211ENST00000584541 ANKIB1Q9P2G1 1089 aa22.59■■□□□ 1.21
RFFL-211ENST00000584541 TFCP2Q12800 502 aa22.58■■□□□ 1.21
RFFL-211ENST00000584541 SOGA3Q5TF21 947 aa22.58■■□□□ 1.21
RFFL-211ENST00000584541 AKAP2Q9Y2D5 859 aa22.58■■□□□ 1.21
RFFL-211ENST00000584541 PDE8BO95263 885 aa22.57■■□□□ 1.2
RFFL-211ENST00000584541 GRIPAP1Q4V328 841 aa22.57■■□□□ 1.2
RFFL-211ENST00000584541 CLASRPQ8N2M8 674 aaKnown RBP22.57■■□□□ 1.2
RFFL-211ENST00000584541 HELBQ8NG08 1087 aaPredicted RBP22.57■■□□□ 1.2
RFFL-211ENST00000584541 ZNF219Q9P2Y4 722 aaPredicted RBP22.57■■□□□ 1.2
RFFL-211ENST00000584541 XDHP47989 1333 aa22.57■■□□□ 1.2
RFFL-211ENST00000584541 C21orf2O43822 256 aa22.56■■□□□ 1.2
RFFL-211ENST00000584541 KCNJ4P48050 445 aa22.56■■□□□ 1.2
RFFL-211ENST00000584541 WWC3Q9ULE0 1092 aa22.56■■□□□ 1.2
RFFL-211ENST00000584541 NSFL1CQ9UNZ2 370 aaKnown RBP22.56■■□□□ 1.2
RFFL-211ENST00000584541 BCS1LQ9Y276 419 aa22.56■■□□□ 1.2
RFFL-211ENST00000584541 TAF5LO75529 589 aa22.55■■□□□ 1.2
RFFL-211ENST00000584541 PUM3Q15397 648 aaKnown RBP22.55■■□□□ 1.2
RFFL-211ENST00000584541 CCDC93Q567U6 631 aa22.55■■□□□ 1.2
RFFL-211ENST00000584541 MPNDQ8N594 471 aa22.55■■□□□ 1.2
RFFL-211ENST00000584541 VGLL2Q8N8G2 317 aa22.55■■□□□ 1.2
RFFL-211ENST00000584541 IL1RAPL2Q9NP60 686 aa22.55■■□□□ 1.2
RFFL-211ENST00000584541 GPR108Q9NPR9 543 aa22.55■■□□□ 1.2
RFFL-211ENST00000584541 GPSM2P81274 684 aa22.54■■□□□ 1.2
RFFL-211ENST00000584541 NUCB1Q02818 461 aa22.54■■□□□ 1.2
RFFL-211ENST00000584541 DPP8Q6V1X1 898 aaPredicted RBP22.54■■□□□ 1.2
RFFL-211ENST00000584541 C7orf43Q8WVR3 580 aa22.54■■□□□ 1.2
RFFL-211ENST00000584541 BCL11AQ9H165 835 aa22.54■■□□□ 1.2
RFFL-211ENST00000584541 PODXL2Q9NZ53 605 aa22.54■■□□□ 1.2
RFFL-211ENST00000584541 LEMD3Q9Y2U8 911 aa22.54■■□□□ 1.2
RFFL-211ENST00000584541 LTBP1Q14766 1721 aa22.54■■□□□ 1.2
RFFL-211ENST00000584541 SMARCA5O60264 1052 aaPredicted RBP22.53■■□□□ 1.2
RFFL-211ENST00000584541 ATP2B4P23634 1241 aa22.53■■□□□ 1.2
RFFL-211ENST00000584541 ATP2B3Q16720 1220 aa22.53■■□□□ 1.2
RFFL-211ENST00000584541 TNNI3KQ59H18 835 aa22.53■■□□□ 1.2
RFFL-211ENST00000584541 CHD1LQ86WJ1 897 aa22.53■■□□□ 1.2
RFFL-211ENST00000584541 RTKN2Q8IZC4 609 aa22.53■■□□□ 1.2
RFFL-211ENST00000584541 GGA1Q9UJY5 639 aa22.53■■□□□ 1.2
RFFL-211ENST00000584541 FPGT-TNNI3KV9GXZ4 949 aa22.53■■□□□ 1.2
RFFL-211ENST00000584541 ARAP2Q8WZ64 1704 aa22.53■■□□□ 1.2
RFFL-211ENST00000584541 ZNF609O15014 1411 aa22.52■■□□□ 1.2
RFFL-211ENST00000584541 IFIT1P09914 478 aaKnown RBP22.52■■□□□ 1.2
RFFL-211ENST00000584541 SLC5A1P13866 664 aa22.52■■□□□ 1.2
RFFL-211ENST00000584541 UBE4AQ14139 1066 aa22.52■■□□□ 1.2
RFFL-211ENST00000584541 ZNF804BA4D1E1 1349 aa22.52■■□□□ 1.2
RFFL-211ENST00000584541 UFL1O94874 794 aa22.51■■□□□ 1.19
RFFL-211ENST00000584541 IFIT2P09913 472 aaKnown RBP22.51■■□□□ 1.19
RFFL-211ENST00000584541 OLFM4Q6UX06 510 aa22.51■■□□□ 1.19
RFFL-211ENST00000584541 AACSQ86V21 672 aa22.51■■□□□ 1.19
RFFL-211ENST00000584541 LPIN2Q92539 896 aa22.51■■□□□ 1.19
RFFL-211ENST00000584541 NEUROD6Q96NK8 337 aa22.51■■□□□ 1.19
RFFL-211ENST00000584541 LNPKQ9C0E8 428 aa22.51■■□□□ 1.19
RFFL-211ENST00000584541 FER1L6Q2WGJ9 1857 aa22.5■■□□□ 1.19
RFFL-211ENST00000584541 A0A1B0GUL7 405 aa22.5■■□□□ 1.19
RFFL-211ENST00000584541 C6orf229H3BNL8 230 aa22.5■■□□□ 1.19
RFFL-211ENST00000584541 SLC51AQ86UW1 340 aa22.5■■□□□ 1.19
RFFL-211ENST00000584541 SUPT20HQ8NEM7 779 aa22.5■■□□□ 1.19
RFFL-211ENST00000584541 FGFR2P21802 821 aa22.49■■□□□ 1.19
RFFL-211ENST00000584541 TBC1D16Q8TBP0 767 aa22.49■■□□□ 1.19
RFFL-211ENST00000584541 EAF2Q96CJ1 260 aaPredicted RBP22.49■■□□□ 1.19
RFFL-211ENST00000584541 EYA3Q99504 573 aa22.49■■□□□ 1.19
RFFL-211ENST00000584541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.49■■□□□ 1.19
RFFL-211ENST00000584541 TIMM10P62072 90 aa22.48■■□□□ 1.19
RFFL-211ENST00000584541 GORABQ5T7V8 394 aa22.48■■□□□ 1.19
RFFL-211ENST00000584541 PELP1Q8IZL8 1130 aaKnown RBP22.48■■□□□ 1.19
RFFL-211ENST00000584541 DUOX1Q9NRD9 1551 aa22.47■■□□□ 1.19
RFFL-211ENST00000584541 CCDC8Q9H0W5 538 aaPredicted RBP22.47■■□□□ 1.19
RFFL-211ENST00000584541 POLLQ9UGP5 575 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms