RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 BSDC1Q9NW68 430 aaPredicted RBP13.57□□□□□ -0.24
TOP3A-216ENST00000583804 ATP6V0A2Q9Y487 856 aa13.57□□□□□ -0.24
TOP3A-216ENST00000583804 KDM2BQ8NHM5 1336 aa13.57□□□□□ -0.24
TOP3A-216ENST00000583804 TAF1P21675 1872 aa13.57□□□□□ -0.24
TOP3A-216ENST00000583804 EYA2O00167 538 aa13.56□□□□□ -0.24
TOP3A-216ENST00000583804 SP8Q8IXZ3 490 aa13.56□□□□□ -0.24
TOP3A-216ENST00000583804 MINPP1Q9UNW1 487 aa13.56□□□□□ -0.24
TOP3A-216ENST00000583804 EXOC6BQ9Y2D4 811 aa13.56□□□□□ -0.24
TOP3A-216ENST00000583804 COL4A1P02462 1669 aa13.55□□□□□ -0.24
TOP3A-216ENST00000583804 HDAC1Q13547 482 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-216ENST00000583804 OLFM4Q6UX06 510 aa13.55□□□□□ -0.24
TOP3A-216ENST00000583804 CENPQQ7L2Z9 268 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-216ENST00000583804 SLC51AQ86UW1 340 aa13.55□□□□□ -0.24
TOP3A-216ENST00000583804 HELBQ8NG08 1087 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-216ENST00000583804 KIAA1551Q9HCM1 1747 aa13.55□□□□□ -0.24
TOP3A-216ENST00000583804 CIAO1O76071 339 aa13.55□□□□□ -0.24
TOP3A-216ENST00000583804 IL15P40933 162 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-216ENST00000583804 CHRNDQ07001 517 aa13.55□□□□□ -0.24
TOP3A-216ENST00000583804 METTL24Q5JXM2 366 aa13.55□□□□□ -0.24
TOP3A-216ENST00000583804 ANKIB1Q9P2G1 1089 aa13.55□□□□□ -0.24
TOP3A-216ENST00000583804 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
TOP3A-216ENST00000583804 NSFL1CQ9UNZ2 370 aaKnown RBP13.55□□□□□ -0.24
TOP3A-216ENST00000583804 NOP58Q9Y2X3 529 aaKnown RBP13.55□□□□□ -0.24
TOP3A-216ENST00000583804 RIPOR2Q9Y4F9 1068 aa13.55□□□□□ -0.24
TOP3A-216ENST00000583804 MROH5Q6ZUA9 1318 aa13.54□□□□□ -0.24
TOP3A-216ENST00000583804 HSP90AB4PQ58FF6 505 aa13.54□□□□□ -0.24
TOP3A-216ENST00000583804 ATG9AQ7Z3C6 839 aa13.54□□□□□ -0.24
TOP3A-216ENST00000583804 C7orf43Q8WVR3 580 aa13.54□□□□□ -0.24
TOP3A-216ENST00000583804 ANKRD2Q9GZV1 360 aa13.54□□□□□ -0.24
TOP3A-216ENST00000583804 DCTPP1Q9H773 170 aa13.54□□□□□ -0.24
TOP3A-216ENST00000583804 CEP126Q9P2H0 1117 aa13.54□□□□□ -0.24
TOP3A-216ENST00000583804 DLEC1Q9Y238 1755 aa13.54□□□□□ -0.24
TOP3A-216ENST00000583804 SLX4Q8IY92 1834 aa13.53□□□□□ -0.24
TOP3A-216ENST00000583804 TAF5LO75529 589 aa13.53□□□□□ -0.24
TOP3A-216ENST00000583804 GPSM2P81274 684 aa13.53□□□□□ -0.24
TOP3A-216ENST00000583804 GPR162Q16538 588 aa13.53□□□□□ -0.24
TOP3A-216ENST00000583804 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
TOP3A-216ENST00000583804 SOGA3Q5TF21 947 aa13.53□□□□□ -0.24
TOP3A-216ENST00000583804 CC2D2BQ6DHV5 1058 aa13.53□□□□□ -0.24
TOP3A-216ENST00000583804 MPNDQ8N594 471 aa13.53□□□□□ -0.24
TOP3A-216ENST00000583804 CACNA1SQ13698 1873 aa13.53□□□□□ -0.24
TOP3A-216ENST00000583804 SMARCA5O60264 1052 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-216ENST00000583804 RAB11FIP3O75154 756 aa13.52□□□□□ -0.25
TOP3A-216ENST00000583804 KCNJ4P48050 445 aa13.52□□□□□ -0.25
TOP3A-216ENST00000583804 RGS3P49796 1198 aa13.52□□□□□ -0.25
TOP3A-216ENST00000583804 TFCP2Q12800 502 aa13.52□□□□□ -0.25
TOP3A-216ENST00000583804 DPP8Q6V1X1 898 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-216ENST00000583804 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.25
TOP3A-216ENST00000583804 XDHP47989 1333 aa13.52□□□□□ -0.25
TOP3A-216ENST00000583804 SPEF2Q9C093 1822 aa13.52□□□□□ -0.25
TOP3A-216ENST00000583804 C6orf229H3BNL8 230 aa13.51□□□□□ -0.25
TOP3A-216ENST00000583804 SASH1O94885 1247 aa13.51□□□□□ -0.25
TOP3A-216ENST00000583804 PDE8BO95263 885 aa13.51□□□□□ -0.25
TOP3A-216ENST00000583804 ANKRD45Q5TZF3 282 aa13.51□□□□□ -0.25
TOP3A-216ENST00000583804 ARHGAP27Q6ZUM4 889 aa13.51□□□□□ -0.25
TOP3A-216ENST00000583804 RTKN2Q8IZC4 609 aa13.51□□□□□ -0.25
TOP3A-216ENST00000583804 GGA1Q9UJY5 639 aa13.51□□□□□ -0.25
TOP3A-216ENST00000583804 SNAP23O00161 211 aa13.5□□□□□ -0.25
TOP3A-216ENST00000583804 UFL1O94874 794 aa13.5□□□□□ -0.25
TOP3A-216ENST00000583804 YBX3P16989 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
TOP3A-216ENST00000583804 KCNA4P22459 653 aa13.5□□□□□ -0.25
TOP3A-216ENST00000583804 RHPN1Q8TCX5 695 aa13.5□□□□□ -0.25
TOP3A-216ENST00000583804 GCC1Q96CN9 775 aa13.5□□□□□ -0.25
TOP3A-216ENST00000583804 KIF1BPQ96EK5 621 aa13.5□□□□□ -0.25
TOP3A-216ENST00000583804 LNPKQ9C0E8 428 aa13.5□□□□□ -0.25
TOP3A-216ENST00000583804 WTIPA6NIX2 430 aaPredicted RBP13.49□□□□□ -0.25
TOP3A-216ENST00000583804 ATP2B4P23634 1241 aa13.49□□□□□ -0.25
TOP3A-216ENST00000583804 GRIPAP1Q4V328 841 aa13.49□□□□□ -0.25
TOP3A-216ENST00000583804 LRRCC1Q9C099 1032 aa13.49□□□□□ -0.25
TOP3A-216ENST00000583804 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
TOP3A-216ENST00000583804 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
TOP3A-216ENST00000583804 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
TOP3A-216ENST00000583804 LEMD3Q9Y2U8 911 aa13.49□□□□□ -0.25
TOP3A-216ENST00000583804 ZNF804BA4D1E1 1349 aa13.49□□□□□ -0.25
TOP3A-216ENST00000583804 BRCA1P38398 1863 aaKnown RBP13.49□□□□□ -0.25
TOP3A-216ENST00000583804 PUM3Q15397 648 aaKnown RBP13.48□□□□□ -0.25
TOP3A-216ENST00000583804 ATP2B3Q16720 1220 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 VGLL2Q8N8G2 317 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 TBC1D16Q8TBP0 767 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 NEUROD6Q96NK8 337 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 GPR101Q96P66 508 aaPredicted RBP13.48□□□□□ -0.25
TOP3A-216ENST00000583804 POLLQ9UGP5 575 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 AKAP2Q9Y2D5 859 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.48□□□□□ -0.25
TOP3A-216ENST00000583804 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 RIMBP2O15034 1052 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 TIMM10P62072 90 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 FKBP4Q02790 459 aaKnown RBP eCLIP13.48□□□□□ -0.25
TOP3A-216ENST00000583804 UBE4AQ14139 1066 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 SMC5Q8IY18 1101 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 CLASRPQ8N2M8 674 aaKnown RBP13.48□□□□□ -0.25
TOP3A-216ENST00000583804 SUPT20HQ8NEM7 779 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 ZC3H12CQ9C0D7 883 aaKnown RBP13.48□□□□□ -0.25
TOP3A-216ENST00000583804 TAOK3Q9H2K8 898 aa13.48□□□□□ -0.25
TOP3A-216ENST00000583804 IFIT1P09914 478 aaKnown RBP13.47□□□□□ -0.25
TOP3A-216ENST00000583804 SLC5A1P13866 664 aa13.47□□□□□ -0.25
TOP3A-216ENST00000583804 TNNI3KQ59H18 835 aa13.47□□□□□ -0.25
TOP3A-216ENST00000583804 AACSQ86V21 672 aa13.47□□□□□ -0.25
TOP3A-216ENST00000583804 LPIN2Q92539 896 aa13.47□□□□□ -0.25
TOP3A-216ENST00000583804 EYA3Q99504 573 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms