RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-227ENST00000583352 CALD1Q05682 793 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-227ENST00000583352 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.41
CDK5RAP3-227ENST00000583352 ZBTB38Q8NAP3 1195 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-227ENST00000583352 TSKSQ9UJT2 592 aa12.52□□□□□ -0.41
CDK5RAP3-227ENST00000583352 G3V3G9 751 aa12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 ZNF853P0CG23 659 aa12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 HUNKP57058 714 aa12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 GNAI1P63096 354 aa12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 TBC1D10BQ4KMP7 808 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 RBM26Q5T8P6 1007 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 KRT26Q7Z3Y9 468 aa12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 TBC1D16Q8TBP0 767 aa12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 MYD88Q99836 296 aa12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 ZC3H12CQ9C0D7 883 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 IFT57Q9NWB7 429 aa12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 COL4A1P02462 1669 aa12.51□□□□□ -0.41
CDK5RAP3-227ENST00000583352 NOGQ13253 232 aa12.5□□□□□ -0.41
CDK5RAP3-227ENST00000583352 DCPSQ96C86 337 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-227ENST00000583352 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-227ENST00000583352 PODXL2Q9NZ53 605 aa12.5□□□□□ -0.41
CDK5RAP3-227ENST00000583352 ANKIB1Q9P2G1 1089 aa12.5□□□□□ -0.41
CDK5RAP3-227ENST00000583352 RTL9Q8NET4 1388 aa12.5□□□□□ -0.41
CDK5RAP3-227ENST00000583352 CCDC85CA6NKD9 419 aa12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 ELL2O00472 640 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 APAF1O14727 1248 aa12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 UFL1O94874 794 aa12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 PCCAP05165 728 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 KIF4BQ2VIQ3 1234 aa12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 CCDC152Q4G0S7 254 aa12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 C2orf69Q8N8R5 385 aa12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 CHMP4AQ9BY43 222 aa12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 GBA2Q9HCG7 927 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 SEC31BQ9NQW1 1179 aa12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 KCNQ5Q9NR82 932 aa12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 GGA1Q9UJY5 639 aa12.49□□□□□ -0.41
CDK5RAP3-227ENST00000583352 ADM5C9JUS6 153 aa12.48□□□□□ -0.41
CDK5RAP3-227ENST00000583352 PDE8AO60658 829 aa12.48□□□□□ -0.41
CDK5RAP3-227ENST00000583352 DDX58O95786 925 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-227ENST00000583352 EGFRP00533 1210 aa12.48□□□□□ -0.41
CDK5RAP3-227ENST00000583352 VIL1P09327 827 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-227ENST00000583352 RGMBQ6NW40 437 aa12.48□□□□□ -0.41
CDK5RAP3-227ENST00000583352 DLK2Q6UY11 383 aa12.48□□□□□ -0.41
CDK5RAP3-227ENST00000583352 CWC25Q9NXE8 425 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-227ENST00000583352 CCDC30Q5VVM6 783 aa12.47□□□□□ -0.41
CDK5RAP3-227ENST00000583352 ANKRD18AQ8IVF6 992 aa12.47□□□□□ -0.41
CDK5RAP3-227ENST00000583352 SULF1Q8IWU6 871 aa12.47□□□□□ -0.41
CDK5RAP3-227ENST00000583352 CCDC102AQ96A19 550 aa12.47□□□□□ -0.41
CDK5RAP3-227ENST00000583352 METTL22Q9BUU2 404 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-227ENST00000583352 MCOLN1Q9GZU1 580 aa12.47□□□□□ -0.41
CDK5RAP3-227ENST00000583352 GGA3Q9NZ52 723 aa12.47□□□□□ -0.41
CDK5RAP3-227ENST00000583352 XDHP47989 1333 aa12.46□□□□□ -0.41
CDK5RAP3-227ENST00000583352 ZBED9Q6R2W3 1325 aa12.46□□□□□ -0.41
CDK5RAP3-227ENST00000583352 FAM161AQ3B820 660 aa12.46□□□□□ -0.41
CDK5RAP3-227ENST00000583352 C8orf58Q8NAV2 365 aa12.46□□□□□ -0.41
CDK5RAP3-227ENST00000583352 AGBL3Q8NEM8 1001 aa12.46□□□□□ -0.41
CDK5RAP3-227ENST00000583352 JARID2Q92833 1246 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-227ENST00000583352 CCDC85AQ96PX6 553 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-227ENST00000583352 ZIC5Q96T25 663 aa12.46□□□□□ -0.41
CDK5RAP3-227ENST00000583352 POLR2AP24928 1970 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-227ENST00000583352 SCN9AQ15858 1988 aa12.46□□□□□ -0.41
CDK5RAP3-227ENST00000583352 ZNF609O15014 1411 aa12.45□□□□□ -0.42
CDK5RAP3-227ENST00000583352 FAM155AB1AL88 458 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-227ENST00000583352 ATP2B4P23634 1241 aa12.45□□□□□ -0.42
CDK5RAP3-227ENST00000583352 ZNF157P51786 506 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-227ENST00000583352 DGKZQ13574 1117 aa12.45□□□□□ -0.42
CDK5RAP3-227ENST00000583352 RSBN1LQ6PCB5 846 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-227ENST00000583352 MAP3K2Q9Y2U5 619 aa12.45□□□□□ -0.42
CDK5RAP3-227ENST00000583352 PCNTO95613 3336 aa12.45□□□□□ -0.42
CDK5RAP3-227ENST00000583352 CASP8AP2Q9UKL3 1982 aa12.45□□□□□ -0.42
CDK5RAP3-227ENST00000583352 ZNF280AP59817 542 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-227ENST00000583352 KIF23Q02241 960 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-227ENST00000583352 MLLT1Q03111 559 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-227ENST00000583352 KSR2Q6VAB6 950 aa12.44□□□□□ -0.42
CDK5RAP3-227ENST00000583352 CDCA5Q96FF9 252 aa12.44□□□□□ -0.42
CDK5RAP3-227ENST00000583352 CDC5LQ99459 802 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-227ENST00000583352 SAGE1Q9NXZ1 904 aa12.44□□□□□ -0.42
CDK5RAP3-227ENST00000583352 ASTN2O75129 1339 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-227ENST00000583352 USP17L8P0C7I0 530 aa12.43□□□□□ -0.42
CDK5RAP3-227ENST00000583352 RGS19P49795 217 aa12.43□□□□□ -0.42
CDK5RAP3-227ENST00000583352 CTSWP56202 376 aa12.43□□□□□ -0.42
CDK5RAP3-227ENST00000583352 NEXNQ0ZGT2 675 aa12.43□□□□□ -0.42
CDK5RAP3-227ENST00000583352 SCARF1Q14162 830 aa12.43□□□□□ -0.42
CDK5RAP3-227ENST00000583352 ANGEL2Q5VTE6 544 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-227ENST00000583352 PODNQ7Z5L7 613 aa12.43□□□□□ -0.42
CDK5RAP3-227ENST00000583352 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
CDK5RAP3-227ENST00000583352 PSME4Q14997 1843 aa12.43□□□□□ -0.42
CDK5RAP3-227ENST00000583352 PI4KAP2A4QPH2 592 aa12.42□□□□□ -0.42
CDK5RAP3-227ENST00000583352 USP17L3A6NCW0 530 aa12.42□□□□□ -0.42
CDK5RAP3-227ENST00000583352 USP17L4A6NCW7 530 aa12.42□□□□□ -0.42
CDK5RAP3-227ENST00000583352 SLC10A3P09131 477 aa12.42□□□□□ -0.42
CDK5RAP3-227ENST00000583352 USP17L1Q7RTZ2 530 aa12.42□□□□□ -0.42
CDK5RAP3-227ENST00000583352 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
CDK5RAP3-227ENST00000583352 PI4KAP1Q8N8J0 262 aa12.42□□□□□ -0.42
CDK5RAP3-227ENST00000583352 GMLQ99445 158 aa12.42□□□□□ -0.42
CDK5RAP3-227ENST00000583352 MYOZ2Q9NPC6 264 aa12.42□□□□□ -0.42
CDK5RAP3-227ENST00000583352 MED23Q9ULK4 1368 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms