RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 RTL5Q5HYW3 569 aaPredicted RBP16.07■□□□□ 0.16
TOP3A-215ENST00000583328 PLBD2Q8NHP8 589 aa16.07■□□□□ 0.16
TOP3A-215ENST00000583328 TBC1D16Q8TBP0 767 aa16.07■□□□□ 0.16
TOP3A-215ENST00000583328 ASTN2O75129 1339 aaPredicted RBP16.06■□□□□ 0.16
TOP3A-215ENST00000583328 ATP5J2-PTCD1G3V325 749 aa16.06■□□□□ 0.16
TOP3A-215ENST00000583328 PRPF38BQ5VTL8 546 aaKnown RBP16.06■□□□□ 0.16
TOP3A-215ENST00000583328 ANKRD13DQ6ZTN6 518 aa16.06■□□□□ 0.16
TOP3A-215ENST00000583328 ISCA1Q9BUE6 129 aa16.06■□□□□ 0.16
TOP3A-215ENST00000583328 CHPF2Q9P2E5 772 aa16.06■□□□□ 0.16
TOP3A-215ENST00000583328 DLG5Q8TDM6 1919 aa16.06■□□□□ 0.16
TOP3A-215ENST00000583328 DUOX1Q9NRD9 1551 aa16.05■□□□□ 0.16
TOP3A-215ENST00000583328 TMPOP42166 694 aaKnown RBP16.05■□□□□ 0.16
TOP3A-215ENST00000583328 SCARF1Q14162 830 aa16.05■□□□□ 0.16
TOP3A-215ENST00000583328 KRT24Q2M2I5 525 aa16.05■□□□□ 0.16
TOP3A-215ENST00000583328 ANGEL2Q5VTE6 544 aaKnown RBP16.05■□□□□ 0.16
TOP3A-215ENST00000583328 RASAL3Q86YV0 1011 aa16.05■□□□□ 0.16
TOP3A-215ENST00000583328 HDAC9Q9UKV0 1011 aa16.05■□□□□ 0.16
TOP3A-215ENST00000583328 LAS1LQ9Y4W2 734 aaKnown RBP16.05■□□□□ 0.16
TOP3A-215ENST00000583328 IRS4O14654 1257 aaPredicted RBP16.04■□□□□ 0.16
TOP3A-215ENST00000583328 ANKIB1Q9P2G1 1089 aa16.04■□□□□ 0.16
TOP3A-215ENST00000583328 HPS5Q9UPZ3 1129 aa16.04■□□□□ 0.16
TOP3A-215ENST00000583328 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
TOP3A-215ENST00000583328 UFL1O94874 794 aa16.03■□□□□ 0.16
TOP3A-215ENST00000583328 FKBP1BP68106 108 aa16.03■□□□□ 0.16
TOP3A-215ENST00000583328 PKN2Q16513 984 aaKnown RBP16.03■□□□□ 0.16
TOP3A-215ENST00000583328 HDGFL1Q5TGJ6 251 aa16.03■□□□□ 0.16
TOP3A-215ENST00000583328 RSBN1LQ6PCB5 846 aaPredicted RBP16.03■□□□□ 0.16
TOP3A-215ENST00000583328 AGBL3Q8NEM8 1001 aa16.03■□□□□ 0.16
TOP3A-215ENST00000583328 GGA1Q9UJY5 639 aa16.03■□□□□ 0.16
TOP3A-215ENST00000583328 CHL1O00533 1208 aa16.02■□□□□ 0.16
TOP3A-215ENST00000583328 ZNF280AP59817 542 aaPredicted RBP16.02■□□□□ 0.16
TOP3A-215ENST00000583328 NEUROD2Q15784 382 aa16.02■□□□□ 0.16
TOP3A-215ENST00000583328 PODXL2Q9NZ53 605 aa16.02■□□□□ 0.16
TOP3A-215ENST00000583328 LAMB2P55268 1798 aa16.01■□□□□ 0.15
TOP3A-215ENST00000583328 TBC1D8O95759 1140 aa16.01■□□□□ 0.15
TOP3A-215ENST00000583328 TRIM28Q13263 835 aaKnown RBP16.01■□□□□ 0.15
TOP3A-215ENST00000583328 SEC31BQ9NQW1 1179 aa16.01■□□□□ 0.15
TOP3A-215ENST00000583328 DBF4Q9UBU7 674 aaPredicted RBP16.01■□□□□ 0.15
TOP3A-215ENST00000583328 TAF1P21675 1872 aa16■□□□□ 0.15
TOP3A-215ENST00000583328 UBE2Q2LH0YL09 131 aa16■□□□□ 0.15
TOP3A-215ENST00000583328 USP17L8P0C7I0 530 aa16■□□□□ 0.15
TOP3A-215ENST00000583328 HSP90B1P14625 803 aaKnown RBP16■□□□□ 0.15
TOP3A-215ENST00000583328 MOB2Q70IA6 237 aa16■□□□□ 0.15
TOP3A-215ENST00000583328 ZNF296Q8WUU4 475 aaPredicted RBP16■□□□□ 0.15
TOP3A-215ENST00000583328 MYOZ2Q9NPC6 264 aa16■□□□□ 0.15
TOP3A-215ENST00000583328 HYPKQ9NX55 129 aa16■□□□□ 0.15
TOP3A-215ENST00000583328 POLR2AP24928 1970 aaKnown RBP16■□□□□ 0.15
TOP3A-215ENST00000583328 TTLL12Q14166 644 aaPredicted RBP15.99■□□□□ 0.15
TOP3A-215ENST00000583328 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
TOP3A-215ENST00000583328 ZBTB38Q8NAP3 1195 aaPredicted RBP15.99■□□□□ 0.15
TOP3A-215ENST00000583328 SCAF8Q9UPN6 1271 aaKnown RBP15.99■□□□□ 0.15
TOP3A-215ENST00000583328 PITPNM2Q9BZ72 1349 aa15.98■□□□□ 0.15
TOP3A-215ENST00000583328 USP17L3A6NCW0 530 aa15.98■□□□□ 0.15
TOP3A-215ENST00000583328 USP17L4A6NCW7 530 aa15.98■□□□□ 0.15
TOP3A-215ENST00000583328 LRRC37AA6NMS7 1700 aa15.98■□□□□ 0.15
TOP3A-215ENST00000583328 HOXB7P09629 217 aa15.98■□□□□ 0.15
TOP3A-215ENST00000583328 CCDC152Q4G0S7 254 aa15.98■□□□□ 0.15
TOP3A-215ENST00000583328 PRAMEF18Q5VWM3 479 aa15.98■□□□□ 0.15
TOP3A-215ENST00000583328 USP17L1Q7RTZ2 530 aa15.98■□□□□ 0.15
TOP3A-215ENST00000583328 GMLQ99445 158 aa15.98■□□□□ 0.15
TOP3A-215ENST00000583328 GPR25O00155 361 aa15.97■□□□□ 0.15
TOP3A-215ENST00000583328 CCDC146Q8IYE0 955 aa15.97■□□□□ 0.15
TOP3A-215ENST00000583328 CCDC85AQ96PX6 553 aaPredicted RBP15.97■□□□□ 0.15
TOP3A-215ENST00000583328 AKAP11Q9UKA4 1901 aa15.96■□□□□ 0.15
TOP3A-215ENST00000583328 ATP2B4P23634 1241 aa15.96■□□□□ 0.15
TOP3A-215ENST00000583328 NF2P35240 595 aa15.96■□□□□ 0.15
TOP3A-215ENST00000583328 TM4SF4P48230 202 aa15.96■□□□□ 0.15
TOP3A-215ENST00000583328 GOLGA2Q08379 1002 aa15.96■□□□□ 0.15
TOP3A-215ENST00000583328 DUSP27Q5VZP5 1158 aa15.96■□□□□ 0.15
TOP3A-215ENST00000583328 PODNQ7Z5L7 613 aa15.96■□□□□ 0.15
TOP3A-215ENST00000583328 XDHP47989 1333 aa15.95■□□□□ 0.14
TOP3A-215ENST00000583328 PDE8AO60658 829 aa15.95■□□□□ 0.14
TOP3A-215ENST00000583328 MKRN3Q13064 507 aaKnown RBP15.95■□□□□ 0.14
TOP3A-215ENST00000583328 FBXO46Q6PJ61 603 aaPredicted RBP15.95■□□□□ 0.14
TOP3A-215ENST00000583328 ANKRD18AQ8IVF6 992 aa15.95■□□□□ 0.14
TOP3A-215ENST00000583328 MYD88Q99836 296 aa15.95■□□□□ 0.14
TOP3A-215ENST00000583328 TNRC18O15417 2968 aaPredicted RBP15.95■□□□□ 0.14
TOP3A-215ENST00000583328 FKTNO75072 461 aa15.94■□□□□ 0.14
TOP3A-215ENST00000583328 NBPF9Q3BBW0 867 aa15.94■□□□□ 0.14
TOP3A-215ENST00000583328 OGFOD1Q8N543 542 aa15.94■□□□□ 0.14
TOP3A-215ENST00000583328 JARID2Q92833 1246 aaPredicted RBP15.94■□□□□ 0.14
TOP3A-215ENST00000583328 TRIM35Q9UPQ4 493 aa15.94■□□□□ 0.14
TOP3A-215ENST00000583328 COL4A1P02462 1669 aa15.94■□□□□ 0.14
TOP3A-215ENST00000583328 DDX60Q8IY21 1712 aaKnown RBP15.94■□□□□ 0.14
TOP3A-215ENST00000583328 ZNF609O15014 1411 aa15.94■□□□□ 0.14
TOP3A-215ENST00000583328 PCCAP05165 728 aaPredicted RBP15.93■□□□□ 0.14
TOP3A-215ENST00000583328 SREBF2Q12772 1141 aa15.93■□□□□ 0.14
TOP3A-215ENST00000583328 RALBP1Q15311 655 aa15.93■□□□□ 0.14
TOP3A-215ENST00000583328 NOM1Q5C9Z4 860 aaKnown RBP15.93■□□□□ 0.14
TOP3A-215ENST00000583328 CCDC191Q8NCU4 936 aa15.93■□□□□ 0.14
TOP3A-215ENST00000583328 FBXW7Q969H0 707 aa15.93■□□□□ 0.14
TOP3A-215ENST00000583328 RUNDC1Q96C34 613 aa15.93■□□□□ 0.14
TOP3A-215ENST00000583328 ARMC9Q7Z3E5 817 aa15.92■□□□□ 0.14
TOP3A-215ENST00000583328 GCC1Q96CN9 775 aa15.92■□□□□ 0.14
TOP3A-215ENST00000583328 MXD3Q9BW11 206 aa15.92■□□□□ 0.14
TOP3A-215ENST00000583328 PHAXQ9H814 394 aaKnown RBP15.92■□□□□ 0.14
TOP3A-215ENST00000583328 CWC25Q9NXE8 425 aaPredicted RBP15.92■□□□□ 0.14
TOP3A-215ENST00000583328 SCN9AQ15858 1988 aa15.92■□□□□ 0.14
TOP3A-215ENST00000583328 PAPPA2Q9BXP8 1791 aa15.92■□□□□ 0.14
TOP3A-215ENST00000583328 WNT10BO00744 389 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms