RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 BCAR3O75815 825 aa15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 UFL1O94874 794 aa15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 IFIT5Q13325 482 aaKnown RBP15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 WASHC4Q2M389 1173 aa15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 TBC1D16Q8TBP0 767 aa15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 GPR101Q96P66 508 aaPredicted RBP15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 EYA3Q99504 573 aa15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 MPHOSPH8Q99549 860 aa15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 BSDC1Q9NW68 430 aaPredicted RBP15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 POLLQ9UGP5 575 aa15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 GGA1Q9UJY5 639 aa15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 GJA3Q9Y6H8 435 aa15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 UTYO14607 1347 aa15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 WDR90Q96KV7 1748 aa15.88■□□□□ 0.13
SMARCE1-218ENST00000582955 IPO8O15397 1037 aaKnown RBP15.87■□□□□ 0.13
SMARCE1-218ENST00000582955 TOMM70O94826 608 aa15.87■□□□□ 0.13
SMARCE1-218ENST00000582955 CCDC57Q2TAC2 916 aa15.87■□□□□ 0.13
SMARCE1-218ENST00000582955 TAF7LQ5H9L4 462 aa15.87■□□□□ 0.13
SMARCE1-218ENST00000582955 PODXL2Q9NZ53 605 aa15.87■□□□□ 0.13
SMARCE1-218ENST00000582955 XDHP47989 1333 aa15.87■□□□□ 0.13
SMARCE1-218ENST00000582955 LTBP1Q14766 1721 aa15.86■□□□□ 0.13
SMARCE1-218ENST00000582955 GPC2Q8N158 579 aa15.86■□□□□ 0.13
SMARCE1-218ENST00000582955 ARHGAP45Q92619 1136 aa15.86■□□□□ 0.13
SMARCE1-218ENST00000582955 USP44Q9H0E7 712 aa15.86■□□□□ 0.13
SMARCE1-218ENST00000582955 BICC1Q9H694 974 aaKnown RBP15.86■□□□□ 0.13
SMARCE1-218ENST00000582955 ZNRF3Q9ULT6 936 aa15.86■□□□□ 0.13
SMARCE1-218ENST00000582955 MINPP1Q9UNW1 487 aa15.86■□□□□ 0.13
SMARCE1-218ENST00000582955 POTECB2RU33 542 aa15.85■□□□□ 0.13
SMARCE1-218ENST00000582955 ATP2B4P23634 1241 aa15.85■□□□□ 0.13
SMARCE1-218ENST00000582955 KAZALD1Q96I82 304 aa15.85■□□□□ 0.13
SMARCE1-218ENST00000582955 ZC3H12CQ9C0D7 883 aaKnown RBP15.85■□□□□ 0.13
SMARCE1-218ENST00000582955 IQCA1LA6NCM1 817 aa15.84■□□□□ 0.13
SMARCE1-218ENST00000582955 G3V3G9 751 aa15.84■□□□□ 0.13
SMARCE1-218ENST00000582955 DOK7Q18PE1 504 aa15.84■□□□□ 0.13
SMARCE1-218ENST00000582955 DCAF8Q5TAQ9 597 aa15.84■□□□□ 0.13
SMARCE1-218ENST00000582955 ATF7IPQ6VMQ6 1270 aa15.84■□□□□ 0.13
SMARCE1-218ENST00000582955 ZNF594Q96JF6 807 aaPredicted RBP15.84■□□□□ 0.13
SMARCE1-218ENST00000582955 L3MBTL3Q96JM7 780 aaPredicted RBP15.84■□□□□ 0.13
SMARCE1-218ENST00000582955 DBNDD1Q9H9R9 158 aa15.84■□□□□ 0.13
SMARCE1-218ENST00000582955 RAD17O75943 681 aa15.83■□□□□ 0.12
SMARCE1-218ENST00000582955 UBTFL1P0CB47 393 aaPredicted RBP15.83■□□□□ 0.12
SMARCE1-218ENST00000582955 TRIM27P14373 513 aa15.83■□□□□ 0.12
SMARCE1-218ENST00000582955 CXCL9Q07325 125 aa15.83■□□□□ 0.12
SMARCE1-218ENST00000582955 ZKSCAN2Q63HK3 967 aa15.83■□□□□ 0.12
SMARCE1-218ENST00000582955 CIAPIN1Q6FI81 312 aa15.83■□□□□ 0.12
SMARCE1-218ENST00000582955 RBM46Q8TBY0 533 aaKnown RBP15.83■□□□□ 0.12
SMARCE1-218ENST00000582955 CLUAP1Q96AJ1 413 aa15.83■□□□□ 0.12
SMARCE1-218ENST00000582955 ANKRD2Q9GZV1 360 aa15.83■□□□□ 0.12
SMARCE1-218ENST00000582955 HACL1Q9UJ83 578 aa15.83■□□□□ 0.12
SMARCE1-218ENST00000582955 TNNQ9UQP3 1299 aa15.83■□□□□ 0.12
SMARCE1-218ENST00000582955 YDJCA8MPS7 323 aa15.82■□□□□ 0.12
SMARCE1-218ENST00000582955 ECE2O60344 883 aa15.82■□□□□ 0.12
SMARCE1-218ENST00000582955 LMOD1P29536 600 aaPredicted RBP15.82■□□□□ 0.12
SMARCE1-218ENST00000582955 KCNJ4P48050 445 aa15.82■□□□□ 0.12
SMARCE1-218ENST00000582955 CHRNDQ07001 517 aa15.82■□□□□ 0.12
SMARCE1-218ENST00000582955 RABL6Q3YEC7 729 aaPredicted RBP15.82■□□□□ 0.12
SMARCE1-218ENST00000582955 LDHAL6AQ6ZMR3 332 aa15.82■□□□□ 0.12
SMARCE1-218ENST00000582955 ANKRD44Q8N8A2 993 aa15.82■□□□□ 0.12
SMARCE1-218ENST00000582955 CNNM1Q9NRU3 951 aa15.82■□□□□ 0.12
SMARCE1-218ENST00000582955 WTIPA6NIX2 430 aaPredicted RBP15.81■□□□□ 0.12
SMARCE1-218ENST00000582955 SCN4AP35499 1836 aa15.81■□□□□ 0.12
SMARCE1-218ENST00000582955 TNIP1Q15025 636 aa15.81■□□□□ 0.12
SMARCE1-218ENST00000582955 INTS3Q68E01 1043 aaKnown RBP15.81■□□□□ 0.12
SMARCE1-218ENST00000582955 TAF1DQ9H5J8 278 aaPredicted RBP15.81■□□□□ 0.12
SMARCE1-218ENST00000582955 LEMD3Q9Y2U8 911 aa15.81■□□□□ 0.12
SMARCE1-218ENST00000582955 MED23Q9ULK4 1368 aa15.8■□□□□ 0.12
SMARCE1-218ENST00000582955 ZNF804BA4D1E1 1349 aa15.8■□□□□ 0.12
SMARCE1-218ENST00000582955 EPHX2P34913 555 aa15.8■□□□□ 0.12
SMARCE1-218ENST00000582955 EAPPQ56P03 285 aaPredicted RBP15.8■□□□□ 0.12
SMARCE1-218ENST00000582955 SMC1BQ8NDV3 1235 aa15.8■□□□□ 0.12
SMARCE1-218ENST00000582955 HELBQ8NG08 1087 aaPredicted RBP15.8■□□□□ 0.12
SMARCE1-218ENST00000582955 MEIS3Q99687 375 aa15.8■□□□□ 0.12
SMARCE1-218ENST00000582955 PLIN1O60240 522 aa15.79■□□□□ 0.12
SMARCE1-218ENST00000582955 TAF5LO75529 589 aa15.79■□□□□ 0.12
SMARCE1-218ENST00000582955 GMPSP49915 693 aaPredicted RBP15.79■□□□□ 0.12
SMARCE1-218ENST00000582955 SCNN1DP51172 638 aa15.79■□□□□ 0.12
SMARCE1-218ENST00000582955 FSTL1Q12841 308 aa15.79■□□□□ 0.12
SMARCE1-218ENST00000582955 FTSJ3Q8IY81 847 aaKnown RBP15.79■□□□□ 0.12
SMARCE1-218ENST00000582955 HDAC5Q9UQL6 1122 aa15.79■□□□□ 0.12
SMARCE1-218ENST00000582955 PSMD14O00487 310 aa15.78■□□□□ 0.12
SMARCE1-218ENST00000582955 POTEIP0CG38 1075 aa15.78■□□□□ 0.12
SMARCE1-218ENST00000582955 POTEJP0CG39 1038 aa15.78■□□□□ 0.12
SMARCE1-218ENST00000582955 PUS3Q9BZE2 481 aaKnown RBP15.78■□□□□ 0.12
SMARCE1-218ENST00000582955 KCNQ5Q9NR82 932 aa15.78■□□□□ 0.12
SMARCE1-218ENST00000582955 LRRFIP2Q9Y608 721 aaKnown RBP15.78■□□□□ 0.12
SMARCE1-218ENST00000582955 GNAI3P08754 354 aa15.77■□□□□ 0.12
SMARCE1-218ENST00000582955 EPS15P42566 896 aa15.77■□□□□ 0.12
SMARCE1-218ENST00000582955 PNMA8AQ86V59 439 aaPredicted RBP15.77■□□□□ 0.12
SMARCE1-218ENST00000582955 TMEM57Q8N5G2 664 aa15.77■□□□□ 0.12
SMARCE1-218ENST00000582955 KLHDC4Q8TBB5 520 aa15.77■□□□□ 0.12
SMARCE1-218ENST00000582955 YTHDC1Q96MU7 727 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-218ENST00000582955 GPRC5DQ9NZD1 345 aa15.77■□□□□ 0.12
SMARCE1-218ENST00000582955 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
SMARCE1-218ENST00000582955 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
SMARCE1-218ENST00000582955 SNAP23O00161 211 aa15.76■□□□□ 0.11
SMARCE1-218ENST00000582955 HSPA6P17066 643 aa15.76■□□□□ 0.11
SMARCE1-218ENST00000582955 KLRK1P26718 216 aa15.76■□□□□ 0.11
SMARCE1-218ENST00000582955 POTEHQ6S545 545 aa15.76■□□□□ 0.11
SMARCE1-218ENST00000582955 TXNRD3Q86VQ6 643 aa15.76■□□□□ 0.11
SMARCE1-218ENST00000582955 LDHDQ86WU2 507 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms