RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 ZBED9Q6R2W3 1325 aa17.65■□□□□ 0.42
GGA3-215ENST00000582821 ANKRD18BA2A2Z9 1011 aa17.64■□□□□ 0.41
GGA3-215ENST00000582821 NBPF7P0C2Y1 421 aaPredicted RBP17.64■□□□□ 0.41
GGA3-215ENST00000582821 HSPA6P17066 643 aa17.64■□□□□ 0.41
GGA3-215ENST00000582821 ATP2B4P23634 1241 aa17.64■□□□□ 0.41
GGA3-215ENST00000582821 EPHA10Q5JZY3 1008 aa17.64■□□□□ 0.41
GGA3-215ENST00000582821 LMBR1LQ6UX01 489 aa17.64■□□□□ 0.41
GGA3-215ENST00000582821 SMC1BQ8NDV3 1235 aa17.64■□□□□ 0.41
GGA3-215ENST00000582821 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
GGA3-215ENST00000582821 API5Q9BZZ5 524 aaKnown RBP17.64■□□□□ 0.41
GGA3-215ENST00000582821 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.41
GGA3-215ENST00000582821 HACL1Q9UJ83 578 aa17.64■□□□□ 0.41
GGA3-215ENST00000582821 IFIT5Q13325 482 aaKnown RBP17.63■□□□□ 0.41
GGA3-215ENST00000582821 ZC3H12CQ9C0D7 883 aaKnown RBP17.63■□□□□ 0.41
GGA3-215ENST00000582821 USP44Q9H0E7 712 aa17.63■□□□□ 0.41
GGA3-215ENST00000582821 GJA3Q9Y6H8 435 aa17.63■□□□□ 0.41
GGA3-215ENST00000582821 CEP350Q5VT06 3117 aa17.63■□□□□ 0.41
GGA3-215ENST00000582821 YDJCA8MPS7 323 aa17.62■□□□□ 0.41
GGA3-215ENST00000582821 RIMBP2O15034 1052 aa17.62■□□□□ 0.41
GGA3-215ENST00000582821 UFL1O94874 794 aa17.62■□□□□ 0.41
GGA3-215ENST00000582821 CCT4P50991 539 aaKnown RBP17.62■□□□□ 0.41
GGA3-215ENST00000582821 TNIP1Q15025 636 aa17.62■□□□□ 0.41
GGA3-215ENST00000582821 CIAPIN1Q6FI81 312 aa17.62■□□□□ 0.41
GGA3-215ENST00000582821 SUCLG2Q96I99 432 aa17.62■□□□□ 0.41
GGA3-215ENST00000582821 MPHOSPH8Q99549 860 aa17.62■□□□□ 0.41
GGA3-215ENST00000582821 SPEF2Q9C093 1822 aa17.62■□□□□ 0.41
GGA3-215ENST00000582821 SCNN1DP51172 638 aa17.61■□□□□ 0.41
GGA3-215ENST00000582821 RABL6Q3YEC7 729 aaPredicted RBP17.61■□□□□ 0.41
GGA3-215ENST00000582821 ANKRD2Q9GZV1 360 aa17.61■□□□□ 0.41
GGA3-215ENST00000582821 LEMD3Q9Y2U8 911 aa17.61■□□□□ 0.41
GGA3-215ENST00000582821 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
GGA3-215ENST00000582821 EPHX2P34913 555 aa17.6■□□□□ 0.41
GGA3-215ENST00000582821 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
GGA3-215ENST00000582821 PNMA8AQ86V59 439 aaPredicted RBP17.6■□□□□ 0.41
GGA3-215ENST00000582821 DBNDD1Q9H9R9 158 aa17.6■□□□□ 0.41
GGA3-215ENST00000582821 IPO8O15397 1037 aaKnown RBP17.59■□□□□ 0.41
GGA3-215ENST00000582821 ECE2O60344 883 aa17.59■□□□□ 0.41
GGA3-215ENST00000582821 RAD17O75943 681 aa17.59■□□□□ 0.41
GGA3-215ENST00000582821 LMOD1P29536 600 aaPredicted RBP17.59■□□□□ 0.41
GGA3-215ENST00000582821 CHADLQ6NUI6 762 aa17.59■□□□□ 0.41
GGA3-215ENST00000582821 LDHDQ86WU2 507 aa17.59■□□□□ 0.41
GGA3-215ENST00000582821 CHMP3Q9Y3E7 222 aa17.59■□□□□ 0.41
GGA3-215ENST00000582821 EPS15P42566 896 aa17.58■□□□□ 0.4
GGA3-215ENST00000582821 APLP1P51693 650 aa17.58■□□□□ 0.4
GGA3-215ENST00000582821 CHRNDQ07001 517 aa17.58■□□□□ 0.4
GGA3-215ENST00000582821 DOK7Q18PE1 504 aa17.58■□□□□ 0.4
GGA3-215ENST00000582821 INTS3Q68E01 1043 aaKnown RBP17.58■□□□□ 0.4
GGA3-215ENST00000582821 GPR101Q96P66 508 aaPredicted RBP17.58■□□□□ 0.4
GGA3-215ENST00000582821 BICC1Q9H694 974 aaKnown RBP17.58■□□□□ 0.4
GGA3-215ENST00000582821 GPRC5DQ9NZD1 345 aa17.58■□□□□ 0.4
GGA3-215ENST00000582821 SCN9AQ15858 1988 aa17.57■□□□□ 0.4
GGA3-215ENST00000582821 MED23Q9ULK4 1368 aa17.57■□□□□ 0.4
GGA3-215ENST00000582821 WTIPA6NIX2 430 aaPredicted RBP17.57■□□□□ 0.4
GGA3-215ENST00000582821 BCAR3O75815 825 aa17.57■□□□□ 0.4
GGA3-215ENST00000582821 POTEIP0CG38 1075 aa17.57■□□□□ 0.4
GGA3-215ENST00000582821 POTEJP0CG39 1038 aa17.57■□□□□ 0.4
GGA3-215ENST00000582821 GMPSP49915 693 aaPredicted RBP17.57■□□□□ 0.4
GGA3-215ENST00000582821 PODNQ7Z5L7 613 aa17.57■□□□□ 0.4
GGA3-215ENST00000582821 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
GGA3-215ENST00000582821 DPF2Q92785 391 aa17.57■□□□□ 0.4
GGA3-215ENST00000582821 ADAMTSL1Q8N6G6 1762 aa17.56■□□□□ 0.4
GGA3-215ENST00000582821 ZNF804BA4D1E1 1349 aa17.56■□□□□ 0.4
GGA3-215ENST00000582821 PSMD14O00487 310 aa17.56■□□□□ 0.4
GGA3-215ENST00000582821 LDHAL6AQ6ZMR3 332 aa17.56■□□□□ 0.4
GGA3-215ENST00000582821 USP50Q70EL3 339 aaPredicted RBP17.56■□□□□ 0.4
GGA3-215ENST00000582821 ZNF594Q96JF6 807 aaPredicted RBP17.56■□□□□ 0.4
GGA3-215ENST00000582821 KCNQ5Q9NR82 932 aa17.56■□□□□ 0.4
GGA3-215ENST00000582821 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
GGA3-215ENST00000582821 G3V3G9 751 aa17.55■□□□□ 0.4
GGA3-215ENST00000582821 VIL1P09327 827 aaKnown RBP17.55■□□□□ 0.4
GGA3-215ENST00000582821 RPS12P25398 132 aaKnown RBP17.55■□□□□ 0.4
GGA3-215ENST00000582821 TAF7LQ5H9L4 462 aa17.55■□□□□ 0.4
GGA3-215ENST00000582821 DCAF8Q5TAQ9 597 aa17.55■□□□□ 0.4
GGA3-215ENST00000582821 ATF7IPQ6VMQ6 1270 aa17.55■□□□□ 0.4
GGA3-215ENST00000582821 C15orf52Q6ZUT6 534 aaKnown RBP17.55■□□□□ 0.4
GGA3-215ENST00000582821 ADARB2Q9NS39 739 aaKnown RBP17.55■□□□□ 0.4
GGA3-215ENST00000582821 PSME4Q14997 1843 aa17.54■□□□□ 0.4
GGA3-215ENST00000582821 TRIM27P14373 513 aa17.54■□□□□ 0.4
GGA3-215ENST00000582821 EAPPQ56P03 285 aaPredicted RBP17.54■□□□□ 0.4
GGA3-215ENST00000582821 COA1Q9GZY4 146 aa17.54■□□□□ 0.4
GGA3-215ENST00000582821 UBTFL1P0CB47 393 aaPredicted RBP17.53■□□□□ 0.4
GGA3-215ENST00000582821 TXNRD3Q86VQ6 643 aa17.53■□□□□ 0.4
GGA3-215ENST00000582821 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
GGA3-215ENST00000582821 CNOT7Q9UIV1 285 aaKnown RBP17.53■□□□□ 0.4
GGA3-215ENST00000582821 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
GGA3-215ENST00000582821 A0A1B0GUL6 1792 aa17.53■□□□□ 0.4
GGA3-215ENST00000582821 IRS2Q9Y4H2 1338 aa17.52■□□□□ 0.4
GGA3-215ENST00000582821 H7C1D1 291 aa17.52■□□□□ 0.4
GGA3-215ENST00000582821 TAF5LO75529 589 aa17.52■□□□□ 0.4
GGA3-215ENST00000582821 ITGBL1O95965 494 aaPredicted RBP17.52■□□□□ 0.4
GGA3-215ENST00000582821 ZKSCAN2Q63HK3 967 aa17.52■□□□□ 0.4
GGA3-215ENST00000582821 HELBQ8NG08 1087 aaPredicted RBP17.52■□□□□ 0.4
GGA3-215ENST00000582821 PGAP2Q9UHJ9 254 aa17.52■□□□□ 0.4
GGA3-215ENST00000582821 CLEC11AQ9Y240 323 aa17.52■□□□□ 0.4
GGA3-215ENST00000582821 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
GGA3-215ENST00000582821 ZNF609O15014 1411 aa17.52■□□□□ 0.4
GGA3-215ENST00000582821 PASKQ96RG2 1323 aa17.51■□□□□ 0.39
GGA3-215ENST00000582821 USP17L3A6NCW0 530 aa17.51■□□□□ 0.39
GGA3-215ENST00000582821 USP17L4A6NCW7 530 aa17.51■□□□□ 0.39
GGA3-215ENST00000582821 KCNJ4P48050 445 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms