RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 RAB11FIP3O75154 756 aa11.81□□□□□ -0.52
RFFL-210ENST00000582308 IL15P40933 162 aaPredicted RBP11.81□□□□□ -0.52
RFFL-210ENST00000582308 CENPQQ7L2Z9 268 aaPredicted RBP11.81□□□□□ -0.52
RFFL-210ENST00000582308 NLGN2Q8NFZ4 835 aa11.81□□□□□ -0.52
RFFL-210ENST00000582308 CNKSR1Q969H4 720 aa11.81□□□□□ -0.52
RFFL-210ENST00000582308 GCC1Q96CN9 775 aa11.81□□□□□ -0.52
RFFL-210ENST00000582308 FHDC1Q9C0D6 1143 aaPredicted RBP11.81□□□□□ -0.52
RFFL-210ENST00000582308 CNNM1Q9NRU3 951 aa11.81□□□□□ -0.52
RFFL-210ENST00000582308 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.81□□□□□ -0.52
RFFL-210ENST00000582308 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
RFFL-210ENST00000582308 HSP90AB4PQ58FF6 505 aa11.8□□□□□ -0.52
RFFL-210ENST00000582308 PRPF40BQ6NWY9 871 aaKnown RBP11.8□□□□□ -0.52
RFFL-210ENST00000582308 TTLL6Q8N841 843 aa11.8□□□□□ -0.52
RFFL-210ENST00000582308 HELBQ8NG08 1087 aaPredicted RBP11.8□□□□□ -0.52
RFFL-210ENST00000582308 MINPP1Q9UNW1 487 aa11.8□□□□□ -0.52
RFFL-210ENST00000582308 ARFGEF1Q9Y6D6 1849 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 PPEF1O14829 653 aaPredicted RBP11.79□□□□□ -0.52
RFFL-210ENST00000582308 SMARCA5O60264 1052 aaPredicted RBP11.79□□□□□ -0.52
RFFL-210ENST00000582308 CHRNDQ07001 517 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 TFCP2Q12800 502 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 METTL24Q5JXM2 366 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 ANKRD45Q5TZF3 282 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 OLFM4Q6UX06 510 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 ERC1Q8IUD2 1116 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 SP8Q8IXZ3 490 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 VGLL2Q8N8G2 317 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 RHPN1Q8TCX5 695 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 PIM2Q9P1W9 311 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 ATP6V0A2Q9Y487 856 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 LTBP1Q14766 1721 aa11.79□□□□□ -0.52
RFFL-210ENST00000582308 TAF5LO75529 589 aa11.78□□□□□ -0.52
RFFL-210ENST00000582308 NUCB1Q02818 461 aa11.78□□□□□ -0.52
RFFL-210ENST00000582308 TMC4Q7Z404 712 aa11.78□□□□□ -0.52
RFFL-210ENST00000582308 KIF1BPQ96EK5 621 aa11.78□□□□□ -0.52
RFFL-210ENST00000582308 SYT17Q9BSW7 474 aa11.78□□□□□ -0.52
RFFL-210ENST00000582308 LRRCC1Q9C099 1032 aa11.78□□□□□ -0.52
RFFL-210ENST00000582308 IL1RAPL2Q9NP60 686 aa11.78□□□□□ -0.52
RFFL-210ENST00000582308 CEP126Q9P2H0 1117 aa11.78□□□□□ -0.52
RFFL-210ENST00000582308 MROH5Q6ZUA9 1318 aa11.78□□□□□ -0.52
RFFL-210ENST00000582308 WTIPA6NIX2 430 aaPredicted RBP11.77□□□□□ -0.53
RFFL-210ENST00000582308 SNAP23O00161 211 aa11.77□□□□□ -0.53
RFFL-210ENST00000582308 PDE8BO95263 885 aa11.77□□□□□ -0.53
RFFL-210ENST00000582308 GPSM2P81274 684 aa11.77□□□□□ -0.53
RFFL-210ENST00000582308 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
RFFL-210ENST00000582308 WWC3Q9ULE0 1092 aa11.77□□□□□ -0.53
RFFL-210ENST00000582308 GOLGB1Q14789 3259 aaKnown RBP11.77□□□□□ -0.53
RFFL-210ENST00000582308 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
RFFL-210ENST00000582308 C21orf2O43822 256 aa11.76□□□□□ -0.53
RFFL-210ENST00000582308 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
RFFL-210ENST00000582308 CHD1LQ86WJ1 897 aa11.76□□□□□ -0.53
RFFL-210ENST00000582308 C16orf71Q8IYS4 520 aaPredicted RBP11.76□□□□□ -0.53
RFFL-210ENST00000582308 EAF2Q96CJ1 260 aaPredicted RBP11.76□□□□□ -0.53
RFFL-210ENST00000582308 LNPKQ9C0E8 428 aa11.76□□□□□ -0.53
RFFL-210ENST00000582308 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
RFFL-210ENST00000582308 BCL11AQ9H165 835 aa11.76□□□□□ -0.53
RFFL-210ENST00000582308 GPR108Q9NPR9 543 aa11.76□□□□□ -0.53
RFFL-210ENST00000582308 ARAP2Q8WZ64 1704 aa11.76□□□□□ -0.53
RFFL-210ENST00000582308 CCDC88AQ3V6T2 1871 aa11.76□□□□□ -0.53
RFFL-210ENST00000582308 FGFR2P21802 821 aa11.75□□□□□ -0.53
RFFL-210ENST00000582308 TIMM10P62072 90 aa11.75□□□□□ -0.53
RFFL-210ENST00000582308 TNNI3KQ59H18 835 aa11.75□□□□□ -0.53
RFFL-210ENST00000582308 PODXL2Q9NZ53 605 aa11.75□□□□□ -0.53
RFFL-210ENST00000582308 ANKIB1Q9P2G1 1089 aa11.75□□□□□ -0.53
RFFL-210ENST00000582308 NSFL1CQ9UNZ2 370 aaKnown RBP11.75□□□□□ -0.53
RFFL-210ENST00000582308 FPGT-TNNI3KV9GXZ4 949 aa11.75□□□□□ -0.53
RFFL-210ENST00000582308 XDHP47989 1333 aa11.75□□□□□ -0.53
RFFL-210ENST00000582308 ZNF609O15014 1411 aa11.75□□□□□ -0.53
RFFL-210ENST00000582308 SNED1Q8TER0 1413 aa11.75□□□□□ -0.53
RFFL-210ENST00000582308 DUOX1Q9NRD9 1551 aa11.75□□□□□ -0.53
RFFL-210ENST00000582308 CHD4Q14839 1912 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 PDE4AP27815 886 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 UBE4AQ14139 1066 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 PUM3Q15397 648 aaKnown RBP11.74□□□□□ -0.53
RFFL-210ENST00000582308 ATP2B3Q16720 1220 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 CC2D2BQ6DHV5 1058 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 AACSQ86V21 672 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 SKAP1Q86WV1 359 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 CLASRPQ8N2M8 674 aaKnown RBP11.74□□□□□ -0.53
RFFL-210ENST00000582308 MPNDQ8N594 471 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 OTUD7AQ8TE49 926 aaPredicted RBP11.74□□□□□ -0.53
RFFL-210ENST00000582308 CCDC8Q9H0W5 538 aaPredicted RBP11.74□□□□□ -0.53
RFFL-210ENST00000582308 POLLQ9UGP5 575 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 BCS1LQ9Y276 419 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 AKAP2Q9Y2D5 859 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 LEMD3Q9Y2U8 911 aa11.74□□□□□ -0.53
RFFL-210ENST00000582308 A0A1B0GUL7 405 aa11.73□□□□□ -0.53
RFFL-210ENST00000582308 ZNF804BA4D1E1 1349 aa11.73□□□□□ -0.53
RFFL-210ENST00000582308 UFL1O94874 794 aa11.73□□□□□ -0.53
RFFL-210ENST00000582308 ADORA1P30542 326 aa11.73□□□□□ -0.53
RFFL-210ENST00000582308 TBC1D16Q8TBP0 767 aa11.73□□□□□ -0.53
RFFL-210ENST00000582308 LPIN2Q92539 896 aa11.73□□□□□ -0.53
RFFL-210ENST00000582308 NEUROD6Q96NK8 337 aa11.73□□□□□ -0.53
RFFL-210ENST00000582308 GPR101Q96P66 508 aaPredicted RBP11.73□□□□□ -0.53
RFFL-210ENST00000582308 TMX4Q9H1E5 349 aaPredicted RBP11.73□□□□□ -0.53
RFFL-210ENST00000582308 TLR7Q9NYK1 1049 aaKnown RBP11.73□□□□□ -0.53
RFFL-210ENST00000582308 ZBTB47Q9UFB7 747 aaPredicted RBP11.73□□□□□ -0.53
RFFL-210ENST00000582308 DBNLQ9UJU6 430 aaKnown RBP11.73□□□□□ -0.53
RFFL-210ENST00000582308 GGA1Q9UJY5 639 aa11.73□□□□□ -0.53
RFFL-210ENST00000582308 AKAP11Q9UKA4 1901 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms