RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 IGHMBP2P38935 993 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-222ENST00000581708 ALDH1L2Q3SY69 923 aa15.97■□□□□ 0.15
CDK5RAP3-222ENST00000581708 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
CDK5RAP3-222ENST00000581708 GREM2Q9H772 168 aa15.97■□□□□ 0.15
CDK5RAP3-222ENST00000581708 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
CDK5RAP3-222ENST00000581708 CLEC11AQ9Y240 323 aa15.97■□□□□ 0.15
CDK5RAP3-222ENST00000581708 COL4A1P02462 1669 aa15.97■□□□□ 0.15
CDK5RAP3-222ENST00000581708 PASKQ96RG2 1323 aa15.96■□□□□ 0.15
CDK5RAP3-222ENST00000581708 GRM8O00222 908 aa15.96■□□□□ 0.15
CDK5RAP3-222ENST00000581708 UFL1O94874 794 aa15.96■□□□□ 0.15
CDK5RAP3-222ENST00000581708 ITGBL1O95965 494 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-222ENST00000581708 EPS15P42566 896 aa15.96■□□□□ 0.15
CDK5RAP3-222ENST00000581708 CCDC85AQ96PX6 553 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-222ENST00000581708 SRCIN1Q9C0H9 1055 aa15.96■□□□□ 0.15
CDK5RAP3-222ENST00000581708 YDJCA8MPS7 323 aa15.95■□□□□ 0.14
CDK5RAP3-222ENST00000581708 F6X3S4 739 aa15.95■□□□□ 0.14
CDK5RAP3-222ENST00000581708 RAD17O75943 681 aa15.95■□□□□ 0.14
CDK5RAP3-222ENST00000581708 ITGA6P23229 1130 aa15.95■□□□□ 0.14
CDK5RAP3-222ENST00000581708 GMPSP49915 693 aaPredicted RBP15.95■□□□□ 0.14
CDK5RAP3-222ENST00000581708 MRPL50Q8N5N7 158 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-222ENST00000581708 JMYQ8N9B5 988 aa15.95■□□□□ 0.14
CDK5RAP3-222ENST00000581708 ZC3H15Q8WU90 426 aaKnown RBP15.95■□□□□ 0.14
CDK5RAP3-222ENST00000581708 BCL2L13Q9BXK5 485 aa15.95■□□□□ 0.14
CDK5RAP3-222ENST00000581708 ANKRD2Q9GZV1 360 aa15.95■□□□□ 0.14
CDK5RAP3-222ENST00000581708 MINPP1Q9UNW1 487 aa15.95■□□□□ 0.14
CDK5RAP3-222ENST00000581708 ZNF609O15014 1411 aa15.94■□□□□ 0.14
CDK5RAP3-222ENST00000581708 G3V3G9 751 aa15.94■□□□□ 0.14
CDK5RAP3-222ENST00000581708 ECE2O60344 883 aa15.94■□□□□ 0.14
CDK5RAP3-222ENST00000581708 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
CDK5RAP3-222ENST00000581708 CNTROBQ8N137 903 aa15.94■□□□□ 0.14
CDK5RAP3-222ENST00000581708 MPHOSPH8Q99549 860 aa15.94■□□□□ 0.14
CDK5RAP3-222ENST00000581708 C9orf78Q9NZ63 289 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP3-222ENST00000581708 LEMD3Q9Y2U8 911 aa15.94■□□□□ 0.14
CDK5RAP3-222ENST00000581708 MED23Q9ULK4 1368 aa15.93■□□□□ 0.14
CDK5RAP3-222ENST00000581708 ANKRD18BA2A2Z9 1011 aa15.93■□□□□ 0.14
CDK5RAP3-222ENST00000581708 H7C1D1 291 aa15.93■□□□□ 0.14
CDK5RAP3-222ENST00000581708 RIMBP2O15034 1052 aa15.93■□□□□ 0.14
CDK5RAP3-222ENST00000581708 FOXO4P98177 505 aa15.93■□□□□ 0.14
CDK5RAP3-222ENST00000581708 IFIT5Q13325 482 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-222ENST00000581708 PODNQ7Z5L7 613 aa15.93■□□□□ 0.14
CDK5RAP3-222ENST00000581708 DBNDD1Q9H9R9 158 aa15.93■□□□□ 0.14
CDK5RAP3-222ENST00000581708 PGAP2Q9UHJ9 254 aa15.93■□□□□ 0.14
CDK5RAP3-222ENST00000581708 UTYO14607 1347 aa15.93■□□□□ 0.14
CDK5RAP3-222ENST00000581708 TMEM88BA6NKF7 163 aa15.92■□□□□ 0.14
CDK5RAP3-222ENST00000581708 VIL1P09327 827 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-222ENST00000581708 BRPF1P55201 1214 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP3-222ENST00000581708 FAM161AQ3B820 660 aa15.92■□□□□ 0.14
CDK5RAP3-222ENST00000581708 DIEXFQ68CQ4 756 aaKnown RBP15.92■□□□□ 0.14
CDK5RAP3-222ENST00000581708 SLC4A10Q6U841 1118 aa15.92■□□□□ 0.14
CDK5RAP3-222ENST00000581708 SSH1Q8WYL5 1049 aa15.92■□□□□ 0.14
CDK5RAP3-222ENST00000581708 PSMD14O00487 310 aa15.91■□□□□ 0.14
CDK5RAP3-222ENST00000581708 MMP14P50281 582 aa15.91■□□□□ 0.14
CDK5RAP3-222ENST00000581708 CCT4P50991 539 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-222ENST00000581708 MAP1SQ66K74 1059 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP3-222ENST00000581708 CDCA7LQ96GN5 454 aa15.91■□□□□ 0.14
CDK5RAP3-222ENST00000581708 CNOT7Q9UIV1 285 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP3-222ENST00000581708 HTRA3P83110 453 aa15.9■□□□□ 0.14
CDK5RAP3-222ENST00000581708 DOK7Q18PE1 504 aa15.9■□□□□ 0.14
CDK5RAP3-222ENST00000581708 CCDC57Q2TAC2 916 aa15.9■□□□□ 0.14
CDK5RAP3-222ENST00000581708 AGBL3Q8NEM8 1001 aa15.9■□□□□ 0.14
CDK5RAP3-222ENST00000581708 COA1Q9GZY4 146 aa15.9■□□□□ 0.14
CDK5RAP3-222ENST00000581708 PSME4Q14997 1843 aa15.89■□□□□ 0.13
CDK5RAP3-222ENST00000581708 LMBR1LQ6UX01 489 aa15.89■□□□□ 0.13
CDK5RAP3-222ENST00000581708 C15orf52Q6ZUT6 534 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-222ENST00000581708 MICALL2Q8IY33 904 aa15.89■□□□□ 0.13
CDK5RAP3-222ENST00000581708 ZNF804BA4D1E1 1349 aa15.89■□□□□ 0.13
CDK5RAP3-222ENST00000581708 SPEF2Q9C093 1822 aa15.89■□□□□ 0.13
CDK5RAP3-222ENST00000581708 GPR101Q96P66 508 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP3-222ENST00000581708 SMC4Q9NTJ3 1288 aa15.88■□□□□ 0.13
CDK5RAP3-222ENST00000581708 USP17L3A6NCW0 530 aa15.87■□□□□ 0.13
CDK5RAP3-222ENST00000581708 USP17L4A6NCW7 530 aa15.87■□□□□ 0.13
CDK5RAP3-222ENST00000581708 CHRNDQ07001 517 aa15.87■□□□□ 0.13
CDK5RAP3-222ENST00000581708 RSBN1LQ6PCB5 846 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-222ENST00000581708 USP17L1Q7RTZ2 530 aa15.87■□□□□ 0.13
CDK5RAP3-222ENST00000581708 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-222ENST00000581708 SCN9AQ15858 1988 aa15.87■□□□□ 0.13
CDK5RAP3-222ENST00000581708 MYO3BQ8WXR4 1341 aa15.87■□□□□ 0.13
CDK5RAP3-222ENST00000581708 CNTNAP1P78357 1384 aa15.87■□□□□ 0.13
CDK5RAP3-222ENST00000581708 KCNJ4P48050 445 aa15.86■□□□□ 0.13
CDK5RAP3-222ENST00000581708 ZNF280AP59817 542 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-222ENST00000581708 RABL6Q3YEC7 729 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-222ENST00000581708 TAF7LQ5H9L4 462 aa15.86■□□□□ 0.13
CDK5RAP3-222ENST00000581708 EPHA10Q5JZY3 1008 aa15.86■□□□□ 0.13
CDK5RAP3-222ENST00000581708 LDHAL6AQ6ZMR3 332 aa15.86■□□□□ 0.13
CDK5RAP3-222ENST00000581708 CDC37L1Q7L3B6 337 aa15.86■□□□□ 0.13
CDK5RAP3-222ENST00000581708 API5Q9BZZ5 524 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-222ENST00000581708 KCNQ5Q9NR82 932 aa15.86■□□□□ 0.13
CDK5RAP3-222ENST00000581708 HDAC5Q9UQL6 1122 aa15.86■□□□□ 0.13
CDK5RAP3-222ENST00000581708 CHMP3Q9Y3E7 222 aa15.86■□□□□ 0.13
CDK5RAP3-222ENST00000581708 RASSF10A6NK89 507 aa15.85■□□□□ 0.13
CDK5RAP3-222ENST00000581708 NBPF7P0C2Y1 421 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-222ENST00000581708 HIRAP54198 1017 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-222ENST00000581708 STRIP1Q5VSL9 837 aa15.85■□□□□ 0.13
CDK5RAP3-222ENST00000581708 MIER1Q8N108 512 aa15.85■□□□□ 0.13
CDK5RAP3-222ENST00000581708 ARHGAP45Q92619 1136 aa15.85■□□□□ 0.13
CDK5RAP3-222ENST00000581708 SUCLG2Q96I99 432 aa15.85■□□□□ 0.13
CDK5RAP3-222ENST00000581708 GMLQ99445 158 aa15.85■□□□□ 0.13
CDK5RAP3-222ENST00000581708 KIF16BQ96L93 1317 aa15.85■□□□□ 0.13
CDK5RAP3-222ENST00000581708 TRPM7Q96QT4 1865 aa15.84■□□□□ 0.13
CDK5RAP3-222ENST00000581708 TRPM4Q8TD43 1214 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms