RNA–Protein interactions for RNA: ENST00000581514.1

SCN4A-202, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 3

Gene SCN4A, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-202ENST00000581514 ABHD8Q96I13 439 aa19.22■□□□□ 0.67
SCN4A-202ENST00000581514 MYD88Q99836 296 aa19.22■□□□□ 0.67
SCN4A-202ENST00000581514 SEC31BQ9NQW1 1179 aa19.22■□□□□ 0.67
SCN4A-202ENST00000581514 KCNQ5Q9NR82 932 aa19.22■□□□□ 0.67
SCN4A-202ENST00000581514 SCN9AQ15858 1988 aa19.22■□□□□ 0.67
SCN4A-202ENST00000581514 RTL9Q8NET4 1388 aa19.21■□□□□ 0.67
SCN4A-202ENST00000581514 PODXL2Q9NZ53 605 aa19.21■□□□□ 0.67
SCN4A-202ENST00000581514 TSKSQ9UJT2 592 aa19.21■□□□□ 0.67
SCN4A-202ENST00000581514 EGFRP00533 1210 aa19.2■□□□□ 0.66
SCN4A-202ENST00000581514 PCCAP05165 728 aaPredicted RBP19.2■□□□□ 0.66
SCN4A-202ENST00000581514 C8orf58Q8NAV2 365 aa19.2■□□□□ 0.66
SCN4A-202ENST00000581514 CCDC191Q8NCU4 936 aa19.2■□□□□ 0.66
SCN4A-202ENST00000581514 CA12O43570 354 aa19.19■□□□□ 0.66
SCN4A-202ENST00000581514 UFL1O94874 794 aa19.19■□□□□ 0.66
SCN4A-202ENST00000581514 BRPF1P55201 1214 aaPredicted RBP19.19■□□□□ 0.66
SCN4A-202ENST00000581514 CCDC152Q4G0S7 254 aa19.19■□□□□ 0.66
SCN4A-202ENST00000581514 DLK2Q6UY11 383 aa19.19■□□□□ 0.66
SCN4A-202ENST00000581514 KRT26Q7Z3Y9 468 aa19.19■□□□□ 0.66
SCN4A-202ENST00000581514 ZC3H12CQ9C0D7 883 aaKnown RBP19.19■□□□□ 0.66
SCN4A-202ENST00000581514 CWC25Q9NXE8 425 aaPredicted RBP19.19■□□□□ 0.66
SCN4A-202ENST00000581514 PDE8AO60658 829 aa19.18■□□□□ 0.66
SCN4A-202ENST00000581514 VIL1P09327 827 aaKnown RBP19.18■□□□□ 0.66
SCN4A-202ENST00000581514 RBM26Q5T8P6 1007 aaKnown RBP19.18■□□□□ 0.66
SCN4A-202ENST00000581514 METTL22Q9BUU2 404 aaPredicted RBP19.18■□□□□ 0.66
SCN4A-202ENST00000581514 ANKIB1Q9P2G1 1089 aa19.18■□□□□ 0.66
SCN4A-202ENST00000581514 GGA1Q9UJY5 639 aa19.18■□□□□ 0.66
SCN4A-202ENST00000581514 HUNKP57058 714 aa19.17■□□□□ 0.66
SCN4A-202ENST00000581514 CCDC30Q5VVM6 783 aa19.17■□□□□ 0.66
SCN4A-202ENST00000581514 JARID2Q92833 1246 aaPredicted RBP19.17■□□□□ 0.66
SCN4A-202ENST00000581514 DCPSQ96C86 337 aaKnown RBP19.17■□□□□ 0.66
SCN4A-202ENST00000581514 CASP8AP2Q9UKL3 1982 aa19.17■□□□□ 0.66
SCN4A-202ENST00000581514 PSME4Q14997 1843 aa19.16■□□□□ 0.66
SCN4A-202ENST00000581514 G3V3G9 751 aa19.16■□□□□ 0.66
SCN4A-202ENST00000581514 DDX58O95786 925 aaKnown RBP19.16■□□□□ 0.66
SCN4A-202ENST00000581514 NOGQ13253 232 aa19.16■□□□□ 0.66
SCN4A-202ENST00000581514 KIF4BQ2VIQ3 1234 aa19.16■□□□□ 0.66
SCN4A-202ENST00000581514 DCAF8Q5TAQ9 597 aa19.16■□□□□ 0.66
SCN4A-202ENST00000581514 CCDC85AQ96PX6 553 aaPredicted RBP19.16■□□□□ 0.66
SCN4A-202ENST00000581514 CHMP4AQ9BY43 222 aa19.16■□□□□ 0.66
SCN4A-202ENST00000581514 ADM5C9JUS6 153 aa19.15■□□□□ 0.66
SCN4A-202ENST00000581514 ZIC5Q96T25 663 aa19.15■□□□□ 0.66
SCN4A-202ENST00000581514 GBA2Q9HCG7 927 aaPredicted RBP19.15■□□□□ 0.66
SCN4A-202ENST00000581514 ANKRD18AQ8IVF6 992 aa19.14■□□□□ 0.65
SCN4A-202ENST00000581514 TSPYL6Q8N831 410 aa19.14■□□□□ 0.65
SCN4A-202ENST00000581514 C2orf69Q8N8R5 385 aa19.14■□□□□ 0.65
SCN4A-202ENST00000581514 MAP3K2Q9Y2U5 619 aa19.14■□□□□ 0.65
SCN4A-202ENST00000581514 ZNF609O15014 1411 aa19.14■□□□□ 0.65
SCN4A-202ENST00000581514 MYH3P11055 1940 aa19.13■□□□□ 0.65
SCN4A-202ENST00000581514 RGMBQ6NW40 437 aa19.13■□□□□ 0.65
SCN4A-202ENST00000581514 GGA3Q9NZ52 723 aa19.13■□□□□ 0.65
SCN4A-202ENST00000581514 XDHP47989 1333 aa19.13■□□□□ 0.65
SCN4A-202ENST00000581514 ASTN2O75129 1339 aaPredicted RBP19.12■□□□□ 0.65
SCN4A-202ENST00000581514 FAM155AB1AL88 458 aaPredicted RBP19.12■□□□□ 0.65
SCN4A-202ENST00000581514 CTSWP56202 376 aa19.12■□□□□ 0.65
SCN4A-202ENST00000581514 ZNF280AP59817 542 aaPredicted RBP19.12■□□□□ 0.65
SCN4A-202ENST00000581514 RSBN1LQ6PCB5 846 aaPredicted RBP19.12■□□□□ 0.65
SCN4A-202ENST00000581514 KSR2Q6VAB6 950 aa19.12■□□□□ 0.65
SCN4A-202ENST00000581514 SULF1Q8IWU6 871 aa19.12■□□□□ 0.65
SCN4A-202ENST00000581514 AGBL3Q8NEM8 1001 aa19.12■□□□□ 0.65
SCN4A-202ENST00000581514 SPEF2Q9C093 1822 aa19.11■□□□□ 0.65
SCN4A-202ENST00000581514 PI4KAP2A4QPH2 592 aa19.11■□□□□ 0.65
SCN4A-202ENST00000581514 CCDC85CA6NKD9 419 aa19.11■□□□□ 0.65
SCN4A-202ENST00000581514 IGKV5-2P06315 115 aa19.11■□□□□ 0.65
SCN4A-202ENST00000581514 ATP2B4P23634 1241 aa19.11■□□□□ 0.65
SCN4A-202ENST00000581514 PI4KAP1Q8N8J0 262 aa19.11■□□□□ 0.65
SCN4A-202ENST00000581514 CDC5LQ99459 802 aaKnown RBP19.11■□□□□ 0.65
SCN4A-202ENST00000581514 TSR2Q969E8 191 aaKnown RBP19.1■□□□□ 0.65
SCN4A-202ENST00000581514 CCDC102AQ96A19 550 aa19.1■□□□□ 0.65
SCN4A-202ENST00000581514 GMLQ99445 158 aa19.1■□□□□ 0.65
SCN4A-202ENST00000581514 ZNF157P51786 506 aaPredicted RBP19.09■□□□□ 0.65
SCN4A-202ENST00000581514 SCARF1Q14162 830 aa19.09■□□□□ 0.65
SCN4A-202ENST00000581514 TTLL11Q8NHH1 800 aa19.09■□□□□ 0.65
SCN4A-202ENST00000581514 CDCA5Q96FF9 252 aa19.09■□□□□ 0.65
SCN4A-202ENST00000581514 STK31Q9BXU1 1019 aa19.09■□□□□ 0.65
SCN4A-202ENST00000581514 MCOLN1Q9GZU1 580 aa19.09■□□□□ 0.65
SCN4A-202ENST00000581514 USP17L3A6NCW0 530 aa19.08■□□□□ 0.64
SCN4A-202ENST00000581514 USP17L4A6NCW7 530 aa19.08■□□□□ 0.64
SCN4A-202ENST00000581514 NEXNQ0ZGT2 675 aa19.08■□□□□ 0.64
SCN4A-202ENST00000581514 FAM161AQ3B820 660 aa19.08■□□□□ 0.64
SCN4A-202ENST00000581514 ANGEL2Q5VTE6 544 aaKnown RBP19.08■□□□□ 0.64
SCN4A-202ENST00000581514 USP17L1Q7RTZ2 530 aa19.08■□□□□ 0.64
SCN4A-202ENST00000581514 PODNQ7Z5L7 613 aa19.08■□□□□ 0.64
SCN4A-202ENST00000581514 GREM2Q9H772 168 aa19.08■□□□□ 0.64
SCN4A-202ENST00000581514 BSDC1Q9NW68 430 aaPredicted RBP19.08■□□□□ 0.64
SCN4A-202ENST00000581514 WTIPA6NIX2 430 aaPredicted RBP19.07■□□□□ 0.64
SCN4A-202ENST00000581514 NEURL1BA8MQ27 555 aa19.07■□□□□ 0.64
SCN4A-202ENST00000581514 USP17L8P0C7I0 530 aa19.07■□□□□ 0.64
SCN4A-202ENST00000581514 KIF23Q02241 960 aaPredicted RBP19.07■□□□□ 0.64
SCN4A-202ENST00000581514 CWF19L2Q2TBE0 894 aaKnown RBP19.07■□□□□ 0.64
SCN4A-202ENST00000581514 MYOZ2Q9NPC6 264 aa19.07■□□□□ 0.64
SCN4A-202ENST00000581514 MINPP1Q9UNW1 487 aa19.07■□□□□ 0.64
SCN4A-202ENST00000581514 AKAP11Q9UKA4 1901 aa19.07■□□□□ 0.64
SCN4A-202ENST00000581514 MED23Q9ULK4 1368 aa19.06■□□□□ 0.64
SCN4A-202ENST00000581514 SLC10A3P09131 477 aa19.06■□□□□ 0.64
SCN4A-202ENST00000581514 DGKZQ13574 1117 aa19.06■□□□□ 0.64
SCN4A-202ENST00000581514 CCDC27Q2M243 656 aa19.06■□□□□ 0.64
SCN4A-202ENST00000581514 TWISTNBQ3B726 338 aaPredicted RBP19.06■□□□□ 0.64
SCN4A-202ENST00000581514 CCDC184Q52MB2 194 aa19.06■□□□□ 0.64
SCN4A-202ENST00000581514 G2E3Q7L622 706 aa19.06■□□□□ 0.64
SCN4A-202ENST00000581514 SAGE1Q9NXZ1 904 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms