RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 ARXQ96QS3 562 aa8.91□□□□□ -0.98
DDX42-213ENST00000581477 GPHNQ9NQX3 736 aaPredicted RBP8.91□□□□□ -0.98
DDX42-213ENST00000581477 CWC25Q9NXE8 425 aaPredicted RBP8.91□□□□□ -0.98
DDX42-213ENST00000581477 C9orf78Q9NZ63 289 aaPredicted RBP8.91□□□□□ -0.98
DDX42-213ENST00000581477 ZNF652Q9Y2D9 606 aa8.91□□□□□ -0.98
DDX42-213ENST00000581477 QSER1Q2KHR3 1735 aa8.91□□□□□ -0.98
DDX42-213ENST00000581477 GTPBP6O43824 516 aaPredicted RBP8.9□□□□□ -0.98
DDX42-213ENST00000581477 ZPR1O75312 459 aa8.9□□□□□ -0.98
DDX42-213ENST00000581477 PCCAP05165 728 aaPredicted RBP8.9□□□□□ -0.98
DDX42-213ENST00000581477 RFC4P35249 363 aa8.9□□□□□ -0.98
DDX42-213ENST00000581477 MTX1Q13505 466 aa8.9□□□□□ -0.98
DDX42-213ENST00000581477 HDAC1Q13547 482 aaPredicted RBP8.9□□□□□ -0.98
DDX42-213ENST00000581477 PARP10Q53GL7 1025 aa8.9□□□□□ -0.98
DDX42-213ENST00000581477 USPL1Q5W0Q7 1092 aa8.9□□□□□ -0.98
DDX42-213ENST00000581477 SMIM5Q71RC9 77 aa8.9□□□□□ -0.98
DDX42-213ENST00000581477 DEFB132Q7Z7B7 95 aa8.9□□□□□ -0.98
DDX42-213ENST00000581477 ANKRD44Q8N8A2 993 aa8.9□□□□□ -0.98
DDX42-213ENST00000581477 ZBTB38Q8NAP3 1195 aaPredicted RBP8.9□□□□□ -0.98
DDX42-213ENST00000581477 CCDC136Q96JN2 1154 aa8.9□□□□□ -0.98
DDX42-213ENST00000581477 TUBGCP6Q96RT7 1819 aa8.89□□□□□ -0.99
DDX42-213ENST00000581477 UBN2Q6ZU65 1347 aa8.89□□□□□ -0.99
DDX42-213ENST00000581477 KDM2BQ8NHM5 1336 aa8.89□□□□□ -0.99
DDX42-213ENST00000581477 CDHR2Q9BYE9 1310 aa8.89□□□□□ -0.99
DDX42-213ENST00000581477 IGHDP01880 384 aa8.89□□□□□ -0.99
DDX42-213ENST00000581477 ATP8B2P98198 1209 aa8.89□□□□□ -0.99
DDX42-213ENST00000581477 SLC15A2Q16348 729 aa8.89□□□□□ -0.99
DDX42-213ENST00000581477 CEP85Q6P2H3 762 aa8.89□□□□□ -0.99
DDX42-213ENST00000581477 SIRT2Q8IXJ6 389 aa8.89□□□□□ -0.99
DDX42-213ENST00000581477 UPF1Q92900 1129 aaKnown RBP eCLIP8.89□□□□□ -0.99
DDX42-213ENST00000581477 KAZALD1Q96I82 304 aa8.89□□□□□ -0.99
DDX42-213ENST00000581477 RWDD1Q9H446 243 aaPredicted RBP8.89□□□□□ -0.99
DDX42-213ENST00000581477 TFCP2L1Q9NZI6 479 aa8.89□□□□□ -0.99
DDX42-213ENST00000581477 SRP68Q9UHB9 627 aaKnown RBP8.89□□□□□ -0.99
DDX42-213ENST00000581477 LRRFIP2Q9Y608 721 aaKnown RBP8.89□□□□□ -0.99
DDX42-213ENST00000581477 PNPLA7Q6ZV29 1317 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 PHF14O94880 888 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 GYS1P13807 737 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 GPTP24298 496 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 RABL6Q3YEC7 729 aaPredicted RBP8.88□□□□□ -0.99
DDX42-213ENST00000581477 SUSD4Q5VX71 490 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 TBC1D9BQ66K14 1250 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 B4GALNT3Q6L9W6 998 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 UBE3BQ7Z3V4 1068 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 PPP1R42Q7Z4L9 355 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 COL23A1Q86Y22 540 aaPredicted RBP8.88□□□□□ -0.99
DDX42-213ENST00000581477 SUCLG2Q96I99 432 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 PLA2G12BQ9BX93 195 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 C1orf115Q9H7X2 142 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 NIP7Q9Y221 180 aaKnown RBP eCLIP8.88□□□□□ -0.99
DDX42-213ENST00000581477 COL24A1Q17RW2 1714 aa8.88□□□□□ -0.99
DDX42-213ENST00000581477 NTSR2O95665 410 aa8.87□□□□□ -0.99
DDX42-213ENST00000581477 TM4SF1P30408 202 aa8.87□□□□□ -0.99
DDX42-213ENST00000581477 FOXO4P98177 505 aa8.87□□□□□ -0.99
DDX42-213ENST00000581477 CENPQQ7L2Z9 268 aaPredicted RBP8.87□□□□□ -0.99
DDX42-213ENST00000581477 SSH3Q8TE77 659 aa8.87□□□□□ -0.99
DDX42-213ENST00000581477 SETDB2Q96T68 719 aa8.87□□□□□ -0.99
DDX42-213ENST00000581477 UTP14AQ9BVJ6 771 aaKnown RBP8.87□□□□□ -0.99
DDX42-213ENST00000581477 CRISPLD2Q9H0B8 497 aa8.87□□□□□ -0.99
DDX42-213ENST00000581477 ANO8Q9HCE9 1232 aaPredicted RBP8.87□□□□□ -0.99
DDX42-213ENST00000581477 STK32BQ9NY57 414 aa8.87□□□□□ -0.99
DDX42-213ENST00000581477 TRMT112Q9UI30 125 aaKnown RBP8.87□□□□□ -0.99
DDX42-213ENST00000581477 PNMA6EA0A0J9YXQ4 647 aa8.86□□□□□ -0.99
DDX42-213ENST00000581477 HMMRO75330 724 aa8.86□□□□□ -0.99
DDX42-213ENST00000581477 CSF1RP07333 972 aa8.86□□□□□ -0.99
DDX42-213ENST00000581477 NFIXQ14938 502 aa8.86□□□□□ -0.99
DDX42-213ENST00000581477 EPHA10Q5JZY3 1008 aa8.86□□□□□ -0.99
DDX42-213ENST00000581477 SLC10A5Q5PT55 438 aa8.86□□□□□ -0.99
DDX42-213ENST00000581477 SMC5Q8IY18 1101 aa8.86□□□□□ -0.99
DDX42-213ENST00000581477 NLGN1Q8N2Q7 840 aa8.86□□□□□ -0.99
DDX42-213ENST00000581477 FAM89AQ96GI7 184 aa8.86□□□□□ -0.99
DDX42-213ENST00000581477 BICC1Q9H694 974 aaKnown RBP8.86□□□□□ -0.99
DDX42-213ENST00000581477 DCTPP1Q9H773 170 aa8.86□□□□□ -0.99
DDX42-213ENST00000581477 SH3TC1Q8TE82 1336 aa8.85□□□□□ -0.99
DDX42-213ENST00000581477 PDE8AO60658 829 aa8.85□□□□□ -0.99
DDX42-213ENST00000581477 HSP90B1P14625 803 aaKnown RBP8.85□□□□□ -0.99
DDX42-213ENST00000581477 KCNC4Q03721 635 aa8.85□□□□□ -0.99
DDX42-213ENST00000581477 TPTE2Q6XPS3 522 aa8.85□□□□□ -0.99
DDX42-213ENST00000581477 SYNE4Q8N205 404 aa8.85□□□□□ -0.99
DDX42-213ENST00000581477 PTCD2Q8WV60 388 aaKnown RBP8.85□□□□□ -0.99
DDX42-213ENST00000581477 JARID2Q92833 1246 aaPredicted RBP8.85□□□□□ -0.99
DDX42-213ENST00000581477 GCC1Q96CN9 775 aa8.85□□□□□ -0.99
DDX42-213ENST00000581477 NYXQ9GZU5 481 aa8.85□□□□□ -0.99
DDX42-213ENST00000581477 EP400Q96L91 3159 aa8.85□□□□□ -0.99
DDX42-213ENST00000581477 CARMIL3Q8ND23 1372 aa8.85□□□□□ -0.99
DDX42-213ENST00000581477 LAMB2P55268 1798 aa8.84□□□□□ -0.99
DDX42-213ENST00000581477 MYH3P11055 1940 aa8.84□□□□□ -0.99
DDX42-213ENST00000581477 IRS4O14654 1257 aaPredicted RBP8.84□□□□□ -0.99
DDX42-213ENST00000581477 LMBR1LQ6UX01 489 aa8.84□□□□□ -0.99
DDX42-213ENST00000581477 BICDL1Q6ZP65 573 aa8.84□□□□□ -0.99
DDX42-213ENST00000581477 TTLL11Q8NHH1 800 aa8.84□□□□□ -0.99
DDX42-213ENST00000581477 SLC16A10Q8TF71 515 aa8.84□□□□□ -0.99
DDX42-213ENST00000581477 NOP58Q9Y2X3 529 aaKnown RBP8.84□□□□□ -0.99
DDX42-213ENST00000581477 DDX60Q8IY21 1712 aaKnown RBP8.83□□□□□ -1
DDX42-213ENST00000581477 NRXN2Q9P2S2 1712 aa8.83□□□□□ -1
DDX42-213ENST00000581477 RIC1Q4ADV7 1423 aa8.83□□□□□ -1
DDX42-213ENST00000581477 POLRMTO00411 1230 aaKnown RBP8.83□□□□□ -1
DDX42-213ENST00000581477 SRGAP3O43295 1099 aa8.83□□□□□ -1
DDX42-213ENST00000581477 RFX5P48382 616 aaPredicted RBP8.83□□□□□ -1
DDX42-213ENST00000581477 ERFEQ4G0M1 354 aa8.83□□□□□ -1
DDX42-213ENST00000581477 RTL5Q5HYW3 569 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms