RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 SP8Q8IXZ3 490 aa11.42□□□□□ -0.58
NUP85-217ENST00000581335 NIM1KQ8IY84 436 aa11.42□□□□□ -0.58
NUP85-217ENST00000581335 SUPT20HQ8NEM7 779 aa11.42□□□□□ -0.58
NUP85-217ENST00000581335 TRMT112Q9UI30 125 aaKnown RBP11.42□□□□□ -0.58
NUP85-217ENST00000581335 TAF1P21675 1872 aa11.42□□□□□ -0.58
NUP85-217ENST00000581335 SH3TC1Q8TE82 1336 aa11.41□□□□□ -0.58
NUP85-217ENST00000581335 TTLL13PA6NNM8 815 aa11.41□□□□□ -0.58
NUP85-217ENST00000581335 HOXB7P09629 217 aa11.41□□□□□ -0.58
NUP85-217ENST00000581335 HCLS1P14317 486 aaPredicted RBP11.41□□□□□ -0.58
NUP85-217ENST00000581335 EPS15P42566 896 aa11.41□□□□□ -0.58
NUP85-217ENST00000581335 VEGFBP49765 207 aa11.41□□□□□ -0.58
NUP85-217ENST00000581335 SCNN1DP51172 638 aa11.41□□□□□ -0.58
NUP85-217ENST00000581335 AOC3Q16853 763 aa11.41□□□□□ -0.58
NUP85-217ENST00000581335 ANKRD13DQ6ZTN6 518 aa11.41□□□□□ -0.58
NUP85-217ENST00000581335 USP50Q70EL3 339 aaPredicted RBP11.41□□□□□ -0.58
NUP85-217ENST00000581335 DDX46Q7L014 1031 aaKnown RBP11.41□□□□□ -0.58
NUP85-217ENST00000581335 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
NUP85-217ENST00000581335 RTFDC1Q9BY42 306 aaPredicted RBP11.41□□□□□ -0.58
NUP85-217ENST00000581335 CHPF2Q9P2E5 772 aa11.41□□□□□ -0.58
NUP85-217ENST00000581335 DDX60Q8IY21 1712 aaKnown RBP11.4□□□□□ -0.58
NUP85-217ENST00000581335 DEFB115Q30KQ5 88 aa11.4□□□□□ -0.58
NUP85-217ENST00000581335 PPP1R15BQ5SWA1 713 aa11.4□□□□□ -0.58
NUP85-217ENST00000581335 HDGFL1Q5TGJ6 251 aa11.4□□□□□ -0.58
NUP85-217ENST00000581335 DPP8Q6V1X1 898 aaPredicted RBP11.4□□□□□ -0.58
NUP85-217ENST00000581335 MPNDQ8N594 471 aa11.4□□□□□ -0.58
NUP85-217ENST00000581335 DBF4Q9UBU7 674 aaPredicted RBP11.4□□□□□ -0.58
NUP85-217ENST00000581335 RASSF10A6NK89 507 aa11.39□□□□□ -0.59
NUP85-217ENST00000581335 CXCL9Q07325 125 aa11.39□□□□□ -0.59
NUP85-217ENST00000581335 GRAPQ13588 217 aa11.39□□□□□ -0.59
NUP85-217ENST00000581335 RBM26Q5T8P6 1007 aaKnown RBP11.39□□□□□ -0.59
NUP85-217ENST00000581335 GRAPLQ8TC17 118 aaPredicted RBP11.39□□□□□ -0.59
NUP85-217ENST00000581335 TRPM7Q96QT4 1865 aa11.39□□□□□ -0.59
NUP85-217ENST00000581335 ISCA1Q9BUE6 129 aa11.39□□□□□ -0.59
NUP85-217ENST00000581335 EMILIN3Q9NT22 766 aa11.39□□□□□ -0.59
NUP85-217ENST00000581335 ZNRF3Q9ULT6 936 aa11.39□□□□□ -0.59
NUP85-217ENST00000581335 FOXN1O15353 648 aa11.38□□□□□ -0.59
NUP85-217ENST00000581335 KIAA2012Q0VF49 1180 aa11.38□□□□□ -0.59
NUP85-217ENST00000581335 DUSP27Q5VZP5 1158 aa11.38□□□□□ -0.59
NUP85-217ENST00000581335 TMC4Q7Z404 712 aa11.38□□□□□ -0.59
NUP85-217ENST00000581335 ZNF428Q96B54 188 aa11.38□□□□□ -0.59
NUP85-217ENST00000581335 PRKRIP1Q9H875 184 aaPredicted RBP11.38□□□□□ -0.59
NUP85-217ENST00000581335 ADARB2Q9NS39 739 aaKnown RBP11.38□□□□□ -0.59
NUP85-217ENST00000581335 MBIPQ9NS73 344 aa11.38□□□□□ -0.59
NUP85-217ENST00000581335 HYPKQ9NX55 129 aa11.38□□□□□ -0.59
NUP85-217ENST00000581335 GPRC5DQ9NZD1 345 aa11.38□□□□□ -0.59
NUP85-217ENST00000581335 ATP5J2-PTCD1G3V325 749 aa11.37□□□□□ -0.59
NUP85-217ENST00000581335 ZNF853P0CG23 659 aa11.37□□□□□ -0.59
NUP85-217ENST00000581335 TNIP1Q15025 636 aa11.37□□□□□ -0.59
NUP85-217ENST00000581335 SF3B3Q15393 1217 aaKnown RBP11.37□□□□□ -0.59
NUP85-217ENST00000581335 CIAPIN1Q6FI81 312 aa11.37□□□□□ -0.59
NUP85-217ENST00000581335 AIDAQ96BJ3 306 aa11.37□□□□□ -0.59
NUP85-217ENST00000581335 FAM89AQ96GI7 184 aa11.37□□□□□ -0.59
NUP85-217ENST00000581335 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
NUP85-217ENST00000581335 ABT1Q9ULW3 272 aaKnown RBP11.37□□□□□ -0.59
NUP85-217ENST00000581335 LRRC37AA6NMS7 1700 aa11.37□□□□□ -0.59
NUP85-217ENST00000581335 WDR33Q9C0J8 1336 aaKnown RBP11.36□□□□□ -0.59
NUP85-217ENST00000581335 APAF1O14727 1248 aa11.36□□□□□ -0.59
NUP85-217ENST00000581335 GMPSP49915 693 aaPredicted RBP11.36□□□□□ -0.59
NUP85-217ENST00000581335 FMR1Q06787 632 aaKnown RBP eCLIP11.36□□□□□ -0.59
NUP85-217ENST00000581335 TRIM28Q13263 835 aaKnown RBP11.36□□□□□ -0.59
NUP85-217ENST00000581335 PRDM10Q9NQV6 1147 aa11.36□□□□□ -0.59
NUP85-217ENST00000581335 WBP1LQ9NX94 342 aa11.36□□□□□ -0.59
NUP85-217ENST00000581335 RAD17O75943 681 aa11.35□□□□□ -0.59
NUP85-217ENST00000581335 CTCFP49711 727 aaPredicted RBP11.35□□□□□ -0.59
NUP85-217ENST00000581335 GNAI1P63096 354 aa11.35□□□□□ -0.59
NUP85-217ENST00000581335 CALD1Q05682 793 aaKnown RBP11.35□□□□□ -0.59
NUP85-217ENST00000581335 CST9Q5W186 159 aa11.35□□□□□ -0.59
NUP85-217ENST00000581335 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
NUP85-217ENST00000581335 CELF1Q92879 486 aaKnown RBP11.35□□□□□ -0.59
NUP85-217ENST00000581335 BCL2L13Q9BXK5 485 aa11.35□□□□□ -0.59
NUP85-217ENST00000581335 IFT57Q9NWB7 429 aa11.35□□□□□ -0.59
NUP85-217ENST00000581335 PGAP2Q9UHJ9 254 aa11.35□□□□□ -0.59
NUP85-217ENST00000581335 DUOX1Q9NRD9 1551 aa11.35□□□□□ -0.59
NUP85-217ENST00000581335 CDHR2Q9BYE9 1310 aa11.35□□□□□ -0.59
NUP85-217ENST00000581335 YDJCA8MPS7 323 aa11.34□□□□□ -0.59
NUP85-217ENST00000581335 TRAF5O00463 557 aa11.34□□□□□ -0.59
NUP85-217ENST00000581335 IRS4O14654 1257 aaPredicted RBP11.34□□□□□ -0.59
NUP85-217ENST00000581335 MAP2K1Q02750 393 aaPredicted RBP11.34□□□□□ -0.59
NUP85-217ENST00000581335 DSG2Q14126 1118 aa11.34□□□□□ -0.59
NUP85-217ENST00000581335 WASHC4Q2M389 1173 aa11.34□□□□□ -0.59
NUP85-217ENST00000581335 RTL5Q5HYW3 569 aaPredicted RBP11.34□□□□□ -0.59
NUP85-217ENST00000581335 PHAXQ9H814 394 aaKnown RBP11.34□□□□□ -0.59
NUP85-217ENST00000581335 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
NUP85-217ENST00000581335 ELL2O00472 640 aaPredicted RBP11.33□□□□□ -0.6
NUP85-217ENST00000581335 ECE1P42892 770 aa11.33□□□□□ -0.6
NUP85-217ENST00000581335 HIRAP54198 1017 aaPredicted RBP11.33□□□□□ -0.6
NUP85-217ENST00000581335 ZBTB38Q8NAP3 1195 aaPredicted RBP11.33□□□□□ -0.6
NUP85-217ENST00000581335 POLLQ9UGP5 575 aa11.33□□□□□ -0.6
NUP85-217ENST00000581335 CNOT7Q9UIV1 285 aaKnown RBP11.33□□□□□ -0.6
NUP85-217ENST00000581335 TLL2Q9Y6L7 1015 aa11.33□□□□□ -0.6
NUP85-217ENST00000581335 COL4A1P02462 1669 aa11.33□□□□□ -0.6
NUP85-217ENST00000581335 THSD7BQ9C0I4 1608 aa11.32□□□□□ -0.6
NUP85-217ENST00000581335 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
NUP85-217ENST00000581335 H7C1D1 291 aa11.32□□□□□ -0.6
NUP85-217ENST00000581335 DPYSL4O14531 572 aa11.32□□□□□ -0.6
NUP85-217ENST00000581335 RIMBP2O15034 1052 aa11.32□□□□□ -0.6
NUP85-217ENST00000581335 LBX1P52954 281 aa11.32□□□□□ -0.6
NUP85-217ENST00000581335 RPS8P62241 208 aaKnown RBP11.32□□□□□ -0.6
NUP85-217ENST00000581335 GPSM2P81274 684 aa11.32□□□□□ -0.6
NUP85-217ENST00000581335 CYP4F22Q6NT55 531 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms