RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 MPHOSPH8Q99549 860 aa18.83■□□□□ 0.6
MKS1-210ENST00000581180 PUS3Q9BZE2 481 aaKnown RBP18.83■□□□□ 0.6
MKS1-210ENST00000581180 MINPP1Q9UNW1 487 aa18.83■□□□□ 0.6
MKS1-210ENST00000581180 DUOX1Q9NRD9 1551 aa18.83■□□□□ 0.6
MKS1-210ENST00000581180 GRIN3BO60391 1043 aa18.82■□□□□ 0.6
MKS1-210ENST00000581180 IRX6P78412 446 aaPredicted RBP18.82■□□□□ 0.6
MKS1-210ENST00000581180 LDHAL6AQ6ZMR3 332 aa18.82■□□□□ 0.6
MKS1-210ENST00000581180 PA2G4Q9UQ80 394 aaKnown RBP18.82■□□□□ 0.6
MKS1-210ENST00000581180 RIPOR2Q9Y4F9 1068 aa18.82■□□□□ 0.6
MKS1-210ENST00000581180 UTRNP46939 3433 aa18.82■□□□□ 0.6
MKS1-210ENST00000581180 NFKBIEO00221 500 aa18.81■□□□□ 0.6
MKS1-210ENST00000581180 AAMPQ13685 434 aa18.81■□□□□ 0.6
MKS1-210ENST00000581180 GRIPAP1Q4V328 841 aa18.81■□□□□ 0.6
MKS1-210ENST00000581180 LRRC24Q50LG9 513 aa18.81■□□□□ 0.6
MKS1-210ENST00000581180 RTKN2Q8IZC4 609 aa18.81■□□□□ 0.6
MKS1-210ENST00000581180 PODXL2Q9NZ53 605 aa18.81■□□□□ 0.6
MKS1-210ENST00000581180 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
MKS1-210ENST00000581180 PCDHB15Q9Y5E8 787 aa18.81■□□□□ 0.6
MKS1-210ENST00000581180 EYA2O00167 538 aa18.8■□□□□ 0.6
MKS1-210ENST00000581180 GPSM2P81274 684 aa18.8■□□□□ 0.6
MKS1-210ENST00000581180 LTBP3Q9NS15 1303 aa18.79■□□□□ 0.6
MKS1-210ENST00000581180 CIAO1O76071 339 aa18.79■□□□□ 0.6
MKS1-210ENST00000581180 CHRNDQ07001 517 aa18.79■□□□□ 0.6
MKS1-210ENST00000581180 ARHGAP27Q6ZUM4 889 aa18.79■□□□□ 0.6
MKS1-210ENST00000581180 ATG9AQ7Z3C6 839 aa18.79■□□□□ 0.6
MKS1-210ENST00000581180 MPNDQ8N594 471 aa18.79■□□□□ 0.6
MKS1-210ENST00000581180 PSMD1Q99460 953 aa18.79■□□□□ 0.6
MKS1-210ENST00000581180 RTFDC1Q9BY42 306 aaPredicted RBP18.79■□□□□ 0.6
MKS1-210ENST00000581180 TMX4Q9H1E5 349 aaPredicted RBP18.79■□□□□ 0.6
MKS1-210ENST00000581180 CNNM1Q9NRU3 951 aa18.79■□□□□ 0.6
MKS1-210ENST00000581180 FKBP4Q02790 459 aaKnown RBP eCLIP18.78■□□□□ 0.6
MKS1-210ENST00000581180 NSFL1CQ9UNZ2 370 aaKnown RBP18.78■□□□□ 0.6
MKS1-210ENST00000581180 NOP58Q9Y2X3 529 aaKnown RBP18.78■□□□□ 0.6
MKS1-210ENST00000581180 XDHP47989 1333 aa18.77■□□□□ 0.6
MKS1-210ENST00000581180 PRELPP51888 382 aa18.77■□□□□ 0.6
MKS1-210ENST00000581180 RASSF7Q02833 373 aa18.77■□□□□ 0.6
MKS1-210ENST00000581180 DPP8Q6V1X1 898 aaPredicted RBP18.77■□□□□ 0.6
MKS1-210ENST00000581180 VGLL2Q8N8G2 317 aa18.77■□□□□ 0.6
MKS1-210ENST00000581180 ANKRD2Q9GZV1 360 aa18.77■□□□□ 0.6
MKS1-210ENST00000581180 SIL1Q9H173 461 aa18.77■□□□□ 0.6
MKS1-210ENST00000581180 TAOK3Q9H2K8 898 aa18.77■□□□□ 0.6
MKS1-210ENST00000581180 POLLQ9UGP5 575 aa18.77■□□□□ 0.6
MKS1-210ENST00000581180 MROH5Q6ZUA9 1318 aa18.76■□□□□ 0.59
MKS1-210ENST00000581180 DCAF8L1A6NGE4 600 aa18.76■□□□□ 0.59
MKS1-210ENST00000581180 HELBQ8NG08 1087 aaPredicted RBP18.76■□□□□ 0.59
MKS1-210ENST00000581180 TBC1D16Q8TBP0 767 aa18.76■□□□□ 0.59
MKS1-210ENST00000581180 ANKIB1Q9P2G1 1089 aa18.76■□□□□ 0.59
MKS1-210ENST00000581180 WTIPA6NIX2 430 aaPredicted RBP18.75■□□□□ 0.59
MKS1-210ENST00000581180 HMMRO75330 724 aa18.75■□□□□ 0.59
MKS1-210ENST00000581180 ATP2B4P23634 1241 aa18.75■□□□□ 0.59
MKS1-210ENST00000581180 IL15P40933 162 aaPredicted RBP18.75■□□□□ 0.59
MKS1-210ENST00000581180 LEMD3Q9Y2U8 911 aa18.75■□□□□ 0.59
MKS1-210ENST00000581180 TAF5LO75529 589 aa18.74■□□□□ 0.59
MKS1-210ENST00000581180 SURF6O75683 361 aaKnown RBP18.74■□□□□ 0.59
MKS1-210ENST00000581180 METTL24Q5JXM2 366 aa18.74■□□□□ 0.59
MKS1-210ENST00000581180 SUPT20HQ8NEM7 779 aa18.74■□□□□ 0.59
MKS1-210ENST00000581180 GGA1Q9UJY5 639 aa18.74■□□□□ 0.59
MKS1-210ENST00000581180 SNAP23O00161 211 aa18.73■□□□□ 0.59
MKS1-210ENST00000581180 UFL1O94874 794 aa18.73■□□□□ 0.59
MKS1-210ENST00000581180 PDE8BO95263 885 aa18.73■□□□□ 0.59
MKS1-210ENST00000581180 G3BP1Q13283 466 aaKnown RBP eCLIP18.73■□□□□ 0.59
MKS1-210ENST00000581180 ZNF277Q9NRM2 450 aaPredicted RBP18.73■□□□□ 0.59
MKS1-210ENST00000581180 ZNF804BA4D1E1 1349 aa18.73■□□□□ 0.59
MKS1-210ENST00000581180 IRS2Q9Y4H2 1338 aa18.73■□□□□ 0.59
MKS1-210ENST00000581180 COL4A5P29400 1685 aa18.73■□□□□ 0.59
MKS1-210ENST00000581180 C6orf229H3BNL8 230 aa18.72■□□□□ 0.59
MKS1-210ENST00000581180 SASH1O94885 1247 aa18.72■□□□□ 0.59
MKS1-210ENST00000581180 VPS33BQ9H267 617 aa18.72■□□□□ 0.59
MKS1-210ENST00000581180 EXOC6BQ9Y2D4 811 aa18.72■□□□□ 0.59
MKS1-210ENST00000581180 ARAP2Q8WZ64 1704 aa18.71■□□□□ 0.59
MKS1-210ENST00000581180 LMNB1P20700 586 aa18.71■□□□□ 0.59
MKS1-210ENST00000581180 FGFR2P21802 821 aa18.71■□□□□ 0.59
MKS1-210ENST00000581180 IARSP41252 1262 aaKnown RBP18.71■□□□□ 0.59
MKS1-210ENST00000581180 KIAA2012Q0VF49 1180 aa18.71■□□□□ 0.59
MKS1-210ENST00000581180 UBE4AQ14139 1066 aa18.71■□□□□ 0.59
MKS1-210ENST00000581180 GPR101Q96P66 508 aaPredicted RBP18.71■□□□□ 0.59
MKS1-210ENST00000581180 CEP126Q9P2H0 1117 aa18.71■□□□□ 0.59
MKS1-210ENST00000581180 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.71■□□□□ 0.59
MKS1-210ENST00000581180 TIAM2Q8IVF5 1701 aa18.71■□□□□ 0.59
MKS1-210ENST00000581180 MED23Q9ULK4 1368 aa18.7■□□□□ 0.58
MKS1-210ENST00000581180 SCN9AQ15858 1988 aa18.7■□□□□ 0.58
MKS1-210ENST00000581180 TFCP2Q12800 502 aa18.7■□□□□ 0.58
MKS1-210ENST00000581180 HDAC1Q13547 482 aaPredicted RBP18.7■□□□□ 0.58
MKS1-210ENST00000581180 C15orf52Q6ZUT6 534 aaKnown RBP18.7■□□□□ 0.58
MKS1-210ENST00000581180 EYA3Q99504 573 aa18.7■□□□□ 0.58
MKS1-210ENST00000581180 DCTPP1Q9H773 170 aa18.7■□□□□ 0.58
MKS1-210ENST00000581180 PSME4Q14997 1843 aa18.7■□□□□ 0.58
MKS1-210ENST00000581180 PPIP5K2O43314 1243 aa18.69■□□□□ 0.58
MKS1-210ENST00000581180 KLRK1P26718 216 aa18.69■□□□□ 0.58
MKS1-210ENST00000581180 AOC3Q16853 763 aa18.69■□□□□ 0.58
MKS1-210ENST00000581180 WASHC4Q2M389 1173 aa18.69■□□□□ 0.58
MKS1-210ENST00000581180 TXNRD3Q86VQ6 643 aa18.69■□□□□ 0.58
MKS1-210ENST00000581180 KCNJ4P48050 445 aa18.68■□□□□ 0.58
MKS1-210ENST00000581180 PUM3Q15397 648 aaKnown RBP18.68■□□□□ 0.58
MKS1-210ENST00000581180 HSP90AB4PQ58FF6 505 aa18.68■□□□□ 0.58
MKS1-210ENST00000581180 C9orf131Q5VYM1 1079 aa18.68■□□□□ 0.58
MKS1-210ENST00000581180 ZC3H12CQ9C0D7 883 aaKnown RBP18.68■□□□□ 0.58
MKS1-210ENST00000581180 RIMBP2O15034 1052 aa18.67■□□□□ 0.58
MKS1-210ENST00000581180 RAB11FIP3O75154 756 aa18.67■□□□□ 0.58
MKS1-210ENST00000581180 OS9Q13438 667 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms