RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 EAPPQ56P03 285 aaPredicted RBP17.82■□□□□ 0.44
SUPT4H1-205ENST00000581166 SSH1Q8WYL5 1049 aa17.82■□□□□ 0.44
SUPT4H1-205ENST00000581166 SRCIN1Q9C0H9 1055 aa17.82■□□□□ 0.44
SUPT4H1-205ENST00000581166 PTPRCP08575 1304 aa17.82■□□□□ 0.44
SUPT4H1-205ENST00000581166 XDHP47989 1333 aa17.82■□□□□ 0.44
SUPT4H1-205ENST00000581166 GRM8O00222 908 aa17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 CT47B1P0C2W7 299 aaPredicted RBP17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 ITGA6P23229 1130 aa17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 ZC3H12CQ9C0D7 883 aaKnown RBP17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 ADAMTSL1Q8N6G6 1762 aa17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 RAD17O75943 681 aa17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 IGHMBP2P38935 993 aaKnown RBP17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 EPS15P42566 896 aa17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 FAM161AQ3B820 660 aa17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 GPR101Q96P66 508 aaPredicted RBP17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 DBNDD1Q9H9R9 158 aa17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 C9orf78Q9NZ63 289 aaPredicted RBP17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 MINPP1Q9UNW1 487 aa17.81■□□□□ 0.44
SUPT4H1-205ENST00000581166 SPEF2Q9C093 1822 aa17.8■□□□□ 0.44
SUPT4H1-205ENST00000581166 ATP2B4P23634 1241 aa17.8■□□□□ 0.44
SUPT4H1-205ENST00000581166 FOXO4P98177 505 aa17.8■□□□□ 0.44
SUPT4H1-205ENST00000581166 DNAJC5GQ8N7S2 189 aa17.8■□□□□ 0.44
SUPT4H1-205ENST00000581166 GPRC5DQ9NZD1 345 aa17.8■□□□□ 0.44
SUPT4H1-205ENST00000581166 CLEC11AQ9Y240 323 aa17.8■□□□□ 0.44
SUPT4H1-205ENST00000581166 ECE2O60344 883 aa17.79■□□□□ 0.44
SUPT4H1-205ENST00000581166 GMPSP49915 693 aaPredicted RBP17.79■□□□□ 0.44
SUPT4H1-205ENST00000581166 DOK7Q18PE1 504 aa17.79■□□□□ 0.44
SUPT4H1-205ENST00000581166 BCL2L13Q9BXK5 485 aa17.79■□□□□ 0.44
SUPT4H1-205ENST00000581166 ANKRD18BA2A2Z9 1011 aa17.78■□□□□ 0.44
SUPT4H1-205ENST00000581166 HTRA3P83110 453 aa17.78■□□□□ 0.44
SUPT4H1-205ENST00000581166 USP50Q70EL3 339 aaPredicted RBP17.78■□□□□ 0.44
SUPT4H1-205ENST00000581166 MPHOSPH8Q99549 860 aa17.78■□□□□ 0.44
SUPT4H1-205ENST00000581166 ADARB2Q9NS39 739 aaKnown RBP17.78■□□□□ 0.44
SUPT4H1-205ENST00000581166 SMC4Q9NTJ3 1288 aa17.78■□□□□ 0.44
SUPT4H1-205ENST00000581166 G3V3G9 751 aa17.77■□□□□ 0.44
SUPT4H1-205ENST00000581166 PSMD14O00487 310 aa17.77■□□□□ 0.44
SUPT4H1-205ENST00000581166 DCAF8Q5TAQ9 597 aa17.77■□□□□ 0.44
SUPT4H1-205ENST00000581166 UTYO14607 1347 aa17.76■□□□□ 0.43
SUPT4H1-205ENST00000581166 PASKQ96RG2 1323 aa17.76■□□□□ 0.43
SUPT4H1-205ENST00000581166 ITGBL1O95965 494 aaPredicted RBP17.76■□□□□ 0.43
SUPT4H1-205ENST00000581166 CCT4P50991 539 aaKnown RBP17.76■□□□□ 0.43
SUPT4H1-205ENST00000581166 IFIT5Q13325 482 aaKnown RBP17.76■□□□□ 0.43
SUPT4H1-205ENST00000581166 EPHA10Q5JZY3 1008 aa17.76■□□□□ 0.43
SUPT4H1-205ENST00000581166 LMBR1LQ6UX01 489 aa17.76■□□□□ 0.43
SUPT4H1-205ENST00000581166 ANKRD2Q9GZV1 360 aa17.76■□□□□ 0.43
SUPT4H1-205ENST00000581166 CNTROBQ8N137 903 aa17.75■□□□□ 0.43
SUPT4H1-205ENST00000581166 DPF2Q92785 391 aa17.75■□□□□ 0.43
SUPT4H1-205ENST00000581166 KCNQ5Q9NR82 932 aa17.75■□□□□ 0.43
SUPT4H1-205ENST00000581166 LEMD3Q9Y2U8 911 aa17.75■□□□□ 0.43
SUPT4H1-205ENST00000581166 CHMP3Q9Y3E7 222 aa17.75■□□□□ 0.43
SUPT4H1-205ENST00000581166 MED23Q9ULK4 1368 aa17.75■□□□□ 0.43
SUPT4H1-205ENST00000581166 NBPF7P0C2Y1 421 aaPredicted RBP17.74■□□□□ 0.43
SUPT4H1-205ENST00000581166 BRPF1P55201 1214 aaPredicted RBP17.74■□□□□ 0.43
SUPT4H1-205ENST00000581166 MAP1SQ66K74 1059 aaPredicted RBP17.74■□□□□ 0.43
SUPT4H1-205ENST00000581166 KLRG1Q96E93 195 aa17.74■□□□□ 0.43
SUPT4H1-205ENST00000581166 CNOT7Q9UIV1 285 aaKnown RBP17.74■□□□□ 0.43
SUPT4H1-205ENST00000581166 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
SUPT4H1-205ENST00000581166 WTIPA6NIX2 430 aaPredicted RBP17.73■□□□□ 0.43
SUPT4H1-205ENST00000581166 RPS12P25398 132 aaKnown RBP17.73■□□□□ 0.43
SUPT4H1-205ENST00000581166 CCDC57Q2TAC2 916 aa17.73■□□□□ 0.43
SUPT4H1-205ENST00000581166 PODNQ7Z5L7 613 aa17.73■□□□□ 0.43
SUPT4H1-205ENST00000581166 SUCLG2Q96I99 432 aa17.73■□□□□ 0.43
SUPT4H1-205ENST00000581166 SCN9AQ15858 1988 aa17.73■□□□□ 0.43
SUPT4H1-205ENST00000581166 H7C1D1 291 aa17.72■□□□□ 0.43
SUPT4H1-205ENST00000581166 VIL1P09327 827 aaKnown RBP17.72■□□□□ 0.43
SUPT4H1-205ENST00000581166 CHRNDQ07001 517 aa17.72■□□□□ 0.43
SUPT4H1-205ENST00000581166 KAZALD1Q96I82 304 aa17.72■□□□□ 0.43
SUPT4H1-205ENST00000581166 CREBZFQ9NS37 354 aa17.72■□□□□ 0.43
SUPT4H1-205ENST00000581166 ZNF804BA4D1E1 1349 aa17.72■□□□□ 0.43
SUPT4H1-205ENST00000581166 RARSP54136 660 aaKnown RBP17.72■□□□□ 0.43
SUPT4H1-205ENST00000581166 HNRNPUQ00839 825 aaKnown RBP eCLIP17.72■□□□□ 0.43
SUPT4H1-205ENST00000581166 MICALL2Q8IY33 904 aa17.72■□□□□ 0.43
SUPT4H1-205ENST00000581166 NOB1Q9ULX3 412 aaKnown RBP17.72■□□□□ 0.43
SUPT4H1-205ENST00000581166 PSME4Q14997 1843 aa17.71■□□□□ 0.43
SUPT4H1-205ENST00000581166 TAF7LQ5H9L4 462 aa17.71■□□□□ 0.43
SUPT4H1-205ENST00000581166 ZC3H15Q8WU90 426 aaKnown RBP17.71■□□□□ 0.43
SUPT4H1-205ENST00000581166 USP44Q9H0E7 712 aa17.71■□□□□ 0.43
SUPT4H1-205ENST00000581166 PGAP2Q9UHJ9 254 aa17.71■□□□□ 0.43
SUPT4H1-205ENST00000581166 SHTN1A0MZ66 631 aa17.7■□□□□ 0.42
SUPT4H1-205ENST00000581166 RABL6Q3YEC7 729 aaPredicted RBP17.7■□□□□ 0.42
SUPT4H1-205ENST00000581166 LDHAL6AQ6ZMR3 332 aa17.7■□□□□ 0.42
SUPT4H1-205ENST00000581166 ZNF594Q96JF6 807 aaPredicted RBP17.7■□□□□ 0.42
SUPT4H1-205ENST00000581166 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
SUPT4H1-205ENST00000581166 COA1Q9GZY4 146 aa17.7■□□□□ 0.42
SUPT4H1-205ENST00000581166 ZNF609O15014 1411 aa17.69■□□□□ 0.42
SUPT4H1-205ENST00000581166 TMEM88BA6NKF7 163 aa17.69■□□□□ 0.42
SUPT4H1-205ENST00000581166 KCNJ4P48050 445 aa17.69■□□□□ 0.42
SUPT4H1-205ENST00000581166 HIRAP54198 1017 aaPredicted RBP17.69■□□□□ 0.42
SUPT4H1-205ENST00000581166 RSBN1LQ6PCB5 846 aaPredicted RBP17.69■□□□□ 0.42
SUPT4H1-205ENST00000581166 TXNRD3Q86VQ6 643 aa17.69■□□□□ 0.42
SUPT4H1-205ENST00000581166 AGBL3Q8NEM8 1001 aa17.69■□□□□ 0.42
SUPT4H1-205ENST00000581166 TRPM4Q8TD43 1214 aa17.69■□□□□ 0.42
SUPT4H1-205ENST00000581166 BICC1Q9H694 974 aaKnown RBP17.69■□□□□ 0.42
SUPT4H1-205ENST00000581166 A0A1B0GUL6 1792 aa17.68■□□□□ 0.42
SUPT4H1-205ENST00000581166 USP17L3A6NCW0 530 aa17.68■□□□□ 0.42
SUPT4H1-205ENST00000581166 USP17L4A6NCW7 530 aa17.68■□□□□ 0.42
SUPT4H1-205ENST00000581166 TAF5LO75529 589 aa17.68■□□□□ 0.42
SUPT4H1-205ENST00000581166 USP17L1Q7RTZ2 530 aa17.68■□□□□ 0.42
SUPT4H1-205ENST00000581166 JMYQ8N9B5 988 aa17.68■□□□□ 0.42
SUPT4H1-205ENST00000581166 CNNM1Q9NRU3 951 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 232.9 ms