RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 ADARB2Q9NS39 739 aaKnown RBP21.58■■□□□ 1.05
CDC42EP4-206ENST00000581014 ANKIB1Q9P2G1 1089 aa21.58■■□□□ 1.05
CDC42EP4-206ENST00000581014 GGA1Q9UJY5 639 aa21.58■■□□□ 1.05
CDC42EP4-206ENST00000581014 PCNTO95613 3336 aa21.58■■□□□ 1.04
CDC42EP4-206ENST00000581014 XDHP47989 1333 aa21.57■■□□□ 1.04
CDC42EP4-206ENST00000581014 RAD17O75943 681 aa21.57■■□□□ 1.04
CDC42EP4-206ENST00000581014 GMPSP49915 693 aaPredicted RBP21.57■■□□□ 1.04
CDC42EP4-206ENST00000581014 TRMT2AQ8IZ69 625 aaKnown RBP21.57■■□□□ 1.04
CDC42EP4-206ENST00000581014 ZC3H12CQ9C0D7 883 aaKnown RBP21.57■■□□□ 1.04
CDC42EP4-206ENST00000581014 CLEC11AQ9Y240 323 aa21.57■■□□□ 1.04
CDC42EP4-206ENST00000581014 CNTROBQ8N137 903 aa21.56■■□□□ 1.04
CDC42EP4-206ENST00000581014 DPF2Q92785 391 aa21.56■■□□□ 1.04
CDC42EP4-206ENST00000581014 MINPP1Q9UNW1 487 aa21.56■■□□□ 1.04
CDC42EP4-206ENST00000581014 TRPM7Q96QT4 1865 aa21.56■■□□□ 1.04
CDC42EP4-206ENST00000581014 RIMBP2O15034 1052 aa21.55■■□□□ 1.04
CDC42EP4-206ENST00000581014 ALDH1L1O75891 902 aa21.55■■□□□ 1.04
CDC42EP4-206ENST00000581014 UFL1O94874 794 aa21.55■■□□□ 1.04
CDC42EP4-206ENST00000581014 ATP2B4P23634 1241 aa21.55■■□□□ 1.04
CDC42EP4-206ENST00000581014 ECE2O60344 883 aa21.54■■□□□ 1.04
CDC42EP4-206ENST00000581014 MAP1SQ66K74 1059 aaPredicted RBP21.54■■□□□ 1.04
CDC42EP4-206ENST00000581014 MRPL50Q8N5N7 158 aaKnown RBP21.54■■□□□ 1.04
CDC42EP4-206ENST00000581014 DBNDD1Q9H9R9 158 aa21.54■■□□□ 1.04
CDC42EP4-206ENST00000581014 GRM8O00222 908 aa21.53■■□□□ 1.04
CDC42EP4-206ENST00000581014 ITGA6P23229 1130 aa21.53■■□□□ 1.04
CDC42EP4-206ENST00000581014 RPS12P25398 132 aaKnown RBP21.53■■□□□ 1.04
CDC42EP4-206ENST00000581014 FOXO4P98177 505 aa21.53■■□□□ 1.04
CDC42EP4-206ENST00000581014 BCL2L13Q9BXK5 485 aa21.53■■□□□ 1.04
CDC42EP4-206ENST00000581014 PGAP2Q9UHJ9 254 aa21.53■■□□□ 1.04
CDC42EP4-206ENST00000581014 MYH3P11055 1940 aa21.53■■□□□ 1.04
CDC42EP4-206ENST00000581014 PSMD14O00487 310 aa21.52■■□□□ 1.04
CDC42EP4-206ENST00000581014 IGHMBP2P38935 993 aaKnown RBP21.52■■□□□ 1.04
CDC42EP4-206ENST00000581014 DOK7Q18PE1 504 aa21.52■■□□□ 1.04
CDC42EP4-206ENST00000581014 FAM161AQ3B820 660 aa21.52■■□□□ 1.04
CDC42EP4-206ENST00000581014 ZC3H15Q8WU90 426 aaKnown RBP21.52■■□□□ 1.04
CDC42EP4-206ENST00000581014 CDCA7LQ96GN5 454 aa21.52■■□□□ 1.04
CDC42EP4-206ENST00000581014 GPR101Q96P66 508 aaPredicted RBP21.52■■□□□ 1.04
CDC42EP4-206ENST00000581014 PTPRCP08575 1304 aa21.52■■□□□ 1.03
CDC42EP4-206ENST00000581014 SPEF2Q9C093 1822 aa21.51■■□□□ 1.03
CDC42EP4-206ENST00000581014 VIL1P09327 827 aaKnown RBP21.51■■□□□ 1.03
CDC42EP4-206ENST00000581014 CT47B1P0C2W7 299 aaPredicted RBP21.51■■□□□ 1.03
CDC42EP4-206ENST00000581014 SSH1Q8WYL5 1049 aa21.51■■□□□ 1.03
CDC42EP4-206ENST00000581014 SRCIN1Q9C0H9 1055 aa21.51■■□□□ 1.03
CDC42EP4-206ENST00000581014 MKRN1Q9UHC7 482 aaKnown RBP21.51■■□□□ 1.03
CDC42EP4-206ENST00000581014 CNOT7Q9UIV1 285 aaKnown RBP21.51■■□□□ 1.03
CDC42EP4-206ENST00000581014 TMEM88BA6NKF7 163 aa21.5■■□□□ 1.03
CDC42EP4-206ENST00000581014 ALDH1L2Q3SY69 923 aa21.5■■□□□ 1.03
CDC42EP4-206ENST00000581014 PODNQ7Z5L7 613 aa21.5■■□□□ 1.03
CDC42EP4-206ENST00000581014 ANKRD2Q9GZV1 360 aa21.5■■□□□ 1.03
CDC42EP4-206ENST00000581014 KCNQ5Q9NR82 932 aa21.5■■□□□ 1.03
CDC42EP4-206ENST00000581014 LEMD3Q9Y2U8 911 aa21.5■■□□□ 1.03
CDC42EP4-206ENST00000581014 MED23Q9ULK4 1368 aa21.49■■□□□ 1.03
CDC42EP4-206ENST00000581014 ZNF609O15014 1411 aa21.49■■□□□ 1.03
CDC42EP4-206ENST00000581014 H7C1D1 291 aa21.49■■□□□ 1.03
CDC42EP4-206ENST00000581014 CCT4P50991 539 aaKnown RBP21.49■■□□□ 1.03
CDC42EP4-206ENST00000581014 MPHOSPH8Q99549 860 aa21.49■■□□□ 1.03
CDC42EP4-206ENST00000581014 ZBTB12Q9Y330 459 aaPredicted RBP21.49■■□□□ 1.03
CDC42EP4-206ENST00000581014 UTYO14607 1347 aa21.49■■□□□ 1.03
CDC42EP4-206ENST00000581014 ANKRD18BA2A2Z9 1011 aa21.48■■□□□ 1.03
CDC42EP4-206ENST00000581014 HSPA1AP0DMV8 641 aaKnown RBP21.48■■□□□ 1.03
CDC42EP4-206ENST00000581014 HSPA1BP0DMV9 641 aaKnown RBP21.48■■□□□ 1.03
CDC42EP4-206ENST00000581014 HIRAP54198 1017 aaPredicted RBP21.48■■□□□ 1.03
CDC42EP4-206ENST00000581014 SLC4A10Q6U841 1118 aa21.48■■□□□ 1.03
CDC42EP4-206ENST00000581014 MICALL2Q8IY33 904 aa21.48■■□□□ 1.03
CDC42EP4-206ENST00000581014 C9orf78Q9NZ63 289 aaPredicted RBP21.48■■□□□ 1.03
CDC42EP4-206ENST00000581014 CNTNAP1P78357 1384 aa21.48■■□□□ 1.03
CDC42EP4-206ENST00000581014 G3V3G9 751 aa21.47■■□□□ 1.03
CDC42EP4-206ENST00000581014 IFIT5Q13325 482 aaKnown RBP21.47■■□□□ 1.03
CDC42EP4-206ENST00000581014 DCAF8Q5TAQ9 597 aa21.47■■□□□ 1.03
CDC42EP4-206ENST00000581014 WTIPA6NIX2 430 aaPredicted RBP21.46■■□□□ 1.03
CDC42EP4-206ENST00000581014 EPHA10Q5JZY3 1008 aa21.46■■□□□ 1.03
CDC42EP4-206ENST00000581014 LMBR1LQ6UX01 489 aa21.46■■□□□ 1.03
CDC42EP4-206ENST00000581014 AGBL3Q8NEM8 1001 aa21.46■■□□□ 1.03
CDC42EP4-206ENST00000581014 TRPM4Q8TD43 1214 aa21.46■■□□□ 1.03
CDC42EP4-206ENST00000581014 BRPF1P55201 1214 aaPredicted RBP21.45■■□□□ 1.02
CDC42EP4-206ENST00000581014 SHTN1A0MZ66 631 aa21.44■■□□□ 1.02
CDC42EP4-206ENST00000581014 CHRNDQ07001 517 aa21.44■■□□□ 1.02
CDC42EP4-206ENST00000581014 COL13A1Q5TAT6 717 aaPredicted RBP21.44■■□□□ 1.02
CDC42EP4-206ENST00000581014 RSBN1LQ6PCB5 846 aaPredicted RBP21.44■■□□□ 1.02
CDC42EP4-206ENST00000581014 KAZALD1Q96I82 304 aa21.44■■□□□ 1.02
CDC42EP4-206ENST00000581014 GMLQ99445 158 aa21.44■■□□□ 1.02
CDC42EP4-206ENST00000581014 COA1Q9GZY4 146 aa21.44■■□□□ 1.02
CDC42EP4-206ENST00000581014 ZNF804BA4D1E1 1349 aa21.44■■□□□ 1.02
CDC42EP4-206ENST00000581014 USP17L3A6NCW0 530 aa21.43■■□□□ 1.02
CDC42EP4-206ENST00000581014 USP17L4A6NCW7 530 aa21.43■■□□□ 1.02
CDC42EP4-206ENST00000581014 RASSF10A6NK89 507 aa21.43■■□□□ 1.02
CDC42EP4-206ENST00000581014 NBPF7P0C2Y1 421 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP4-206ENST00000581014 ZNF280AP59817 542 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP4-206ENST00000581014 CCDC57Q2TAC2 916 aa21.43■■□□□ 1.02
CDC42EP4-206ENST00000581014 C15orf52Q6ZUT6 534 aaKnown RBP21.43■■□□□ 1.02
CDC42EP4-206ENST00000581014 USP17L1Q7RTZ2 530 aa21.43■■□□□ 1.02
CDC42EP4-206ENST00000581014 PSME4Q14997 1843 aa21.43■■□□□ 1.02
CDC42EP4-206ENST00000581014 SCN9AQ15858 1988 aa21.43■■□□□ 1.02
CDC42EP4-206ENST00000581014 RABL6Q3YEC7 729 aaPredicted RBP21.42■■□□□ 1.02
CDC42EP4-206ENST00000581014 DIEXFQ68CQ4 756 aaKnown RBP21.42■■□□□ 1.02
CDC42EP4-206ENST00000581014 CDC37L1Q7L3B6 337 aa21.42■■□□□ 1.02
CDC42EP4-206ENST00000581014 SAMD7Q7Z3H4 446 aa21.42■■□□□ 1.02
CDC42EP4-206ENST00000581014 THSD7BQ9C0I4 1608 aa21.41■■□□□ 1.02
CDC42EP4-206ENST00000581014 CST9Q5W186 159 aa21.41■■□□□ 1.02
CDC42EP4-206ENST00000581014 TXNRD3Q86VQ6 643 aa21.41■■□□□ 1.02
CDC42EP4-206ENST00000581014 SUCLG2Q96I99 432 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms