RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 USP44Q9H0E7 712 aa16.73■□□□□ 0.27
NUP85-215ENST00000580879 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
NUP85-215ENST00000580879 PODXL2Q9NZ53 605 aa16.73■□□□□ 0.27
NUP85-215ENST00000580879 GGA1Q9UJY5 639 aa16.73■□□□□ 0.27
NUP85-215ENST00000580879 MINPP1Q9UNW1 487 aa16.73■□□□□ 0.27
NUP85-215ENST00000580879 TNNQ9UQP3 1299 aa16.73■□□□□ 0.27
NUP85-215ENST00000580879 SPEF2Q9C093 1822 aa16.73■□□□□ 0.27
NUP85-215ENST00000580879 TOMM70O94826 608 aa16.72■□□□□ 0.27
NUP85-215ENST00000580879 CCT4P50991 539 aaKnown RBP16.72■□□□□ 0.27
NUP85-215ENST00000580879 ZNF594Q96JF6 807 aaPredicted RBP16.72■□□□□ 0.27
NUP85-215ENST00000580879 MPHOSPH8Q99549 860 aa16.72■□□□□ 0.27
NUP85-215ENST00000580879 BICC1Q9H694 974 aaKnown RBP16.72■□□□□ 0.27
NUP85-215ENST00000580879 DBNDD1Q9H9R9 158 aa16.72■□□□□ 0.27
NUP85-215ENST00000580879 ZNRF3Q9ULT6 936 aa16.72■□□□□ 0.27
NUP85-215ENST00000580879 LTBP1Q14766 1721 aa16.72■□□□□ 0.27
NUP85-215ENST00000580879 XDHP47989 1333 aa16.71■□□□□ 0.27
NUP85-215ENST00000580879 WDR90Q96KV7 1748 aa16.71■□□□□ 0.27
NUP85-215ENST00000580879 DOK7Q18PE1 504 aa16.71■□□□□ 0.27
NUP85-215ENST00000580879 CCDC57Q2TAC2 916 aa16.71■□□□□ 0.27
NUP85-215ENST00000580879 GPC2Q8N158 579 aa16.71■□□□□ 0.27
NUP85-215ENST00000580879 EYA3Q99504 573 aa16.71■□□□□ 0.27
NUP85-215ENST00000580879 YDJCA8MPS7 323 aa16.7■□□□□ 0.26
NUP85-215ENST00000580879 RAD17O75943 681 aa16.7■□□□□ 0.26
NUP85-215ENST00000580879 TRIM27P14373 513 aa16.7■□□□□ 0.26
NUP85-215ENST00000580879 CXCL9Q07325 125 aa16.7■□□□□ 0.26
NUP85-215ENST00000580879 TAF7LQ5H9L4 462 aa16.7■□□□□ 0.26
NUP85-215ENST00000580879 ANKRD44Q8N8A2 993 aa16.7■□□□□ 0.26
NUP85-215ENST00000580879 ARHGAP45Q92619 1136 aa16.7■□□□□ 0.26
NUP85-215ENST00000580879 L3MBTL3Q96JM7 780 aaPredicted RBP16.7■□□□□ 0.26
NUP85-215ENST00000580879 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
NUP85-215ENST00000580879 ATP2B4P23634 1241 aa16.69■□□□□ 0.26
NUP85-215ENST00000580879 CLUAP1Q96AJ1 413 aa16.69■□□□□ 0.26
NUP85-215ENST00000580879 ZC3H12CQ9C0D7 883 aaKnown RBP16.69■□□□□ 0.26
NUP85-215ENST00000580879 IQCA1LA6NCM1 817 aa16.68■□□□□ 0.26
NUP85-215ENST00000580879 ECE2O60344 883 aa16.68■□□□□ 0.26
NUP85-215ENST00000580879 POTEIP0CG38 1075 aa16.68■□□□□ 0.26
NUP85-215ENST00000580879 POTEJP0CG39 1038 aa16.68■□□□□ 0.26
NUP85-215ENST00000580879 CHRNDQ07001 517 aa16.68■□□□□ 0.26
NUP85-215ENST00000580879 CIAPIN1Q6FI81 312 aa16.68■□□□□ 0.26
NUP85-215ENST00000580879 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
NUP85-215ENST00000580879 HELBQ8NG08 1087 aaPredicted RBP16.68■□□□□ 0.26
NUP85-215ENST00000580879 RBM46Q8TBY0 533 aaKnown RBP16.68■□□□□ 0.26
NUP85-215ENST00000580879 KCNQ5Q9NR82 932 aa16.68■□□□□ 0.26
NUP85-215ENST00000580879 HACL1Q9UJ83 578 aa16.68■□□□□ 0.26
NUP85-215ENST00000580879 SNAP23O00161 211 aa16.67■□□□□ 0.26
NUP85-215ENST00000580879 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
NUP85-215ENST00000580879 RABL6Q3YEC7 729 aaPredicted RBP16.67■□□□□ 0.26
NUP85-215ENST00000580879 MEIS3Q99687 375 aa16.67■□□□□ 0.26
NUP85-215ENST00000580879 TAF1DQ9H5J8 278 aaPredicted RBP16.67■□□□□ 0.26
NUP85-215ENST00000580879 G3V3G9 751 aa16.66■□□□□ 0.26
NUP85-215ENST00000580879 TAF5LO75529 589 aa16.66■□□□□ 0.26
NUP85-215ENST00000580879 KLRK1P26718 216 aa16.66■□□□□ 0.26
NUP85-215ENST00000580879 EPHX2P34913 555 aa16.66■□□□□ 0.26
NUP85-215ENST00000580879 GMPSP49915 693 aaPredicted RBP16.66■□□□□ 0.26
NUP85-215ENST00000580879 SCNN1DP51172 638 aa16.66■□□□□ 0.26
NUP85-215ENST00000580879 EAPPQ56P03 285 aaPredicted RBP16.66■□□□□ 0.26
NUP85-215ENST00000580879 DCAF8Q5TAQ9 597 aa16.66■□□□□ 0.26
NUP85-215ENST00000580879 ZKSCAN2Q63HK3 967 aa16.66■□□□□ 0.26
NUP85-215ENST00000580879 INTS3Q68E01 1043 aaKnown RBP16.66■□□□□ 0.26
NUP85-215ENST00000580879 LDHAL6AQ6ZMR3 332 aa16.66■□□□□ 0.26
NUP85-215ENST00000580879 PUS3Q9BZE2 481 aaKnown RBP16.66■□□□□ 0.26
NUP85-215ENST00000580879 ANKRD2Q9GZV1 360 aa16.66■□□□□ 0.26
NUP85-215ENST00000580879 CNNM1Q9NRU3 951 aa16.66■□□□□ 0.26
NUP85-215ENST00000580879 PSMD14O00487 310 aa16.65■□□□□ 0.26
NUP85-215ENST00000580879 PLIN1O60240 522 aa16.65■□□□□ 0.26
NUP85-215ENST00000580879 LMOD1P29536 600 aaPredicted RBP16.65■□□□□ 0.26
NUP85-215ENST00000580879 EPS15P42566 896 aa16.65■□□□□ 0.26
NUP85-215ENST00000580879 KCNJ4P48050 445 aa16.65■□□□□ 0.26
NUP85-215ENST00000580879 TXNRD3Q86VQ6 643 aa16.65■□□□□ 0.26
NUP85-215ENST00000580879 KLHDC4Q8TBB5 520 aa16.65■□□□□ 0.26
NUP85-215ENST00000580879 LEMD3Q9Y2U8 911 aa16.65■□□□□ 0.26
NUP85-215ENST00000580879 ZNF804BA4D1E1 1349 aa16.65■□□□□ 0.26
NUP85-215ENST00000580879 TNIP1Q15025 636 aa16.64■□□□□ 0.25
NUP85-215ENST00000580879 SMC1BQ8NDV3 1235 aa16.64■□□□□ 0.25
NUP85-215ENST00000580879 ZBTB12Q9Y330 459 aaPredicted RBP16.64■□□□□ 0.25
NUP85-215ENST00000580879 LRRFIP2Q9Y608 721 aaKnown RBP16.64■□□□□ 0.25
NUP85-215ENST00000580879 MED23Q9ULK4 1368 aa16.64■□□□□ 0.25
NUP85-215ENST00000580879 SHTN1A0MZ66 631 aa16.63■□□□□ 0.25
NUP85-215ENST00000580879 TMEM57Q8N5G2 664 aa16.63■□□□□ 0.25
NUP85-215ENST00000580879 GPRC5DQ9NZD1 345 aa16.63■□□□□ 0.25
NUP85-215ENST00000580879 SCN4AP35499 1836 aa16.63■□□□□ 0.25
NUP85-215ENST00000580879 HSPA6P17066 643 aa16.62■□□□□ 0.25
NUP85-215ENST00000580879 FSTL1Q12841 308 aa16.62■□□□□ 0.25
NUP85-215ENST00000580879 LRRC24Q50LG9 513 aa16.62■□□□□ 0.25
NUP85-215ENST00000580879 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
NUP85-215ENST00000580879 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
NUP85-215ENST00000580879 SCN9AQ15858 1988 aa16.61■□□□□ 0.25
NUP85-215ENST00000580879 RLBP1P12271 317 aa16.61■□□□□ 0.25
NUP85-215ENST00000580879 CHADLQ6NUI6 762 aa16.61■□□□□ 0.25
NUP85-215ENST00000580879 FTSJ3Q8IY81 847 aaKnown RBP16.61■□□□□ 0.25
NUP85-215ENST00000580879 RFX5P48382 616 aaPredicted RBP16.6■□□□□ 0.25
NUP85-215ENST00000580879 PNMA8AQ86V59 439 aaPredicted RBP16.6■□□□□ 0.25
NUP85-215ENST00000580879 LDHDQ86WU2 507 aa16.6■□□□□ 0.25
NUP85-215ENST00000580879 FBXW7Q969H0 707 aa16.6■□□□□ 0.25
NUP85-215ENST00000580879 RIPOR2Q9Y4F9 1068 aa16.6■□□□□ 0.25
NUP85-215ENST00000580879 CEP350Q5VT06 3117 aa16.59■□□□□ 0.25
NUP85-215ENST00000580879 GNAI3P08754 354 aa16.59■□□□□ 0.25
NUP85-215ENST00000580879 MICALL2Q8IY33 904 aa16.59■□□□□ 0.25
NUP85-215ENST00000580879 DZIP1LQ8IYY4 767 aaKnown RBP16.59■□□□□ 0.25
NUP85-215ENST00000580879 COA1Q9GZY4 146 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms