RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 TBC1D16Q8TBP0 767 aa13.32□□□□□ -0.28
GGA3-210ENST00000580799 DCPSQ96C86 337 aaKnown RBP13.32□□□□□ -0.28
GGA3-210ENST00000580799 ZC3H12CQ9C0D7 883 aaKnown RBP13.32□□□□□ -0.28
GGA3-210ENST00000580799 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
GGA3-210ENST00000580799 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
GGA3-210ENST00000580799 GNAI1P63096 354 aa13.31□□□□□ -0.28
GGA3-210ENST00000580799 DOK7Q18PE1 504 aa13.31□□□□□ -0.28
GGA3-210ENST00000580799 CCDC152Q4G0S7 254 aa13.31□□□□□ -0.28
GGA3-210ENST00000580799 C2orf69Q8N8R5 385 aa13.31□□□□□ -0.28
GGA3-210ENST00000580799 CCDC191Q8NCU4 936 aa13.31□□□□□ -0.28
GGA3-210ENST00000580799 IFT57Q9NWB7 429 aa13.31□□□□□ -0.28
GGA3-210ENST00000580799 PSME4Q14997 1843 aa13.31□□□□□ -0.28
GGA3-210ENST00000580799 CCDC85CA6NKD9 419 aa13.3□□□□□ -0.28
GGA3-210ENST00000580799 G3V3G9 751 aa13.3□□□□□ -0.28
GGA3-210ENST00000580799 VIL1P09327 827 aaKnown RBP13.3□□□□□ -0.28
GGA3-210ENST00000580799 DCAF8Q5TAQ9 597 aa13.3□□□□□ -0.28
GGA3-210ENST00000580799 RGMBQ6NW40 437 aa13.3□□□□□ -0.28
GGA3-210ENST00000580799 CCDC102AQ96A19 550 aa13.3□□□□□ -0.28
GGA3-210ENST00000580799 GBA2Q9HCG7 927 aaPredicted RBP13.3□□□□□ -0.28
GGA3-210ENST00000580799 KCNQ5Q9NR82 932 aa13.3□□□□□ -0.28
GGA3-210ENST00000580799 ANKIB1Q9P2G1 1089 aa13.3□□□□□ -0.28
GGA3-210ENST00000580799 SCN9AQ15858 1988 aa13.3□□□□□ -0.28
GGA3-210ENST00000580799 PDE8AO60658 829 aa13.29□□□□□ -0.28
GGA3-210ENST00000580799 UFL1O94874 794 aa13.29□□□□□ -0.28
GGA3-210ENST00000580799 DDX58O95786 925 aaKnown RBP13.29□□□□□ -0.28
GGA3-210ENST00000580799 EGFRP00533 1210 aa13.29□□□□□ -0.28
GGA3-210ENST00000580799 PCCAP05165 728 aaPredicted RBP13.29□□□□□ -0.28
GGA3-210ENST00000580799 RGS19P49795 217 aa13.29□□□□□ -0.28
GGA3-210ENST00000580799 KIF4BQ2VIQ3 1234 aa13.29□□□□□ -0.28
GGA3-210ENST00000580799 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
GGA3-210ENST00000580799 SULF1Q8IWU6 871 aa13.29□□□□□ -0.28
GGA3-210ENST00000580799 PHAXQ9H814 394 aaKnown RBP13.29□□□□□ -0.28
GGA3-210ENST00000580799 SEC31BQ9NQW1 1179 aa13.29□□□□□ -0.28
GGA3-210ENST00000580799 CWC25Q9NXE8 425 aaPredicted RBP13.29□□□□□ -0.28
GGA3-210ENST00000580799 GGA1Q9UJY5 639 aa13.29□□□□□ -0.28
GGA3-210ENST00000580799 FAM155AB1AL88 458 aaPredicted RBP13.28□□□□□ -0.28
GGA3-210ENST00000580799 ADM5C9JUS6 153 aa13.28□□□□□ -0.28
GGA3-210ENST00000580799 MLLT1Q03111 559 aaPredicted RBP13.28□□□□□ -0.28
GGA3-210ENST00000580799 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
GGA3-210ENST00000580799 AGBL3Q8NEM8 1001 aa13.28□□□□□ -0.28
GGA3-210ENST00000580799 MYD88Q99836 296 aa13.28□□□□□ -0.28
GGA3-210ENST00000580799 MCOLN1Q9GZU1 580 aa13.28□□□□□ -0.28
GGA3-210ENST00000580799 SAGE1Q9NXZ1 904 aa13.28□□□□□ -0.28
GGA3-210ENST00000580799 POLR2AP24928 1970 aaKnown RBP13.28□□□□□ -0.28
GGA3-210ENST00000580799 XDHP47989 1333 aa13.28□□□□□ -0.28
GGA3-210ENST00000580799 APAF1O14727 1248 aa13.27□□□□□ -0.29
GGA3-210ENST00000580799 ZNF280AP59817 542 aaPredicted RBP13.27□□□□□ -0.29
GGA3-210ENST00000580799 CCDC30Q5VVM6 783 aa13.27□□□□□ -0.29
GGA3-210ENST00000580799 DLK2Q6UY11 383 aa13.27□□□□□ -0.29
GGA3-210ENST00000580799 METTL22Q9BUU2 404 aaPredicted RBP13.27□□□□□ -0.29
GGA3-210ENST00000580799 PRKRIP1Q9H875 184 aaPredicted RBP13.27□□□□□ -0.29
GGA3-210ENST00000580799 GGA3Q9NZ52 723 aa13.27□□□□□ -0.29
GGA3-210ENST00000580799 CASP8AP2Q9UKL3 1982 aa13.27□□□□□ -0.29
GGA3-210ENST00000580799 ELL2O00472 640 aaPredicted RBP13.26□□□□□ -0.29
GGA3-210ENST00000580799 ZNF157P51786 506 aaPredicted RBP13.26□□□□□ -0.29
GGA3-210ENST00000580799 DGKZQ13574 1117 aa13.26□□□□□ -0.29
GGA3-210ENST00000580799 RSBN1LQ6PCB5 846 aaPredicted RBP13.26□□□□□ -0.29
GGA3-210ENST00000580799 ANKRD18AQ8IVF6 992 aa13.26□□□□□ -0.29
GGA3-210ENST00000580799 ZIC5Q96T25 663 aa13.26□□□□□ -0.29
GGA3-210ENST00000580799 MYH3P11055 1940 aa13.25□□□□□ -0.29
GGA3-210ENST00000580799 PITPNM2Q9BZ72 1349 aa13.25□□□□□ -0.29
GGA3-210ENST00000580799 FKBP1BP68106 108 aa13.25□□□□□ -0.29
GGA3-210ENST00000580799 KIF23Q02241 960 aaPredicted RBP13.25□□□□□ -0.29
GGA3-210ENST00000580799 PODNQ7Z5L7 613 aa13.25□□□□□ -0.29
GGA3-210ENST00000580799 REM2Q8IYK8 340 aaPredicted RBP13.25□□□□□ -0.29
GGA3-210ENST00000580799 C8orf58Q8NAV2 365 aa13.25□□□□□ -0.29
GGA3-210ENST00000580799 CDC5LQ99459 802 aaKnown RBP13.25□□□□□ -0.29
GGA3-210ENST00000580799 AKAP11Q9UKA4 1901 aa13.25□□□□□ -0.29
GGA3-210ENST00000580799 PAPPA2Q9BXP8 1791 aa13.25□□□□□ -0.29
GGA3-210ENST00000580799 USP17L3A6NCW0 530 aa13.24□□□□□ -0.29
GGA3-210ENST00000580799 USP17L4A6NCW7 530 aa13.24□□□□□ -0.29
GGA3-210ENST00000580799 SLC10A3P09131 477 aa13.24□□□□□ -0.29
GGA3-210ENST00000580799 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
GGA3-210ENST00000580799 ATP2B4P23634 1241 aa13.24□□□□□ -0.29
GGA3-210ENST00000580799 ANGEL2Q5VTE6 544 aaKnown RBP13.24□□□□□ -0.29
GGA3-210ENST00000580799 USP17L1Q7RTZ2 530 aa13.24□□□□□ -0.29
GGA3-210ENST00000580799 CDCA5Q96FF9 252 aa13.24□□□□□ -0.29
GGA3-210ENST00000580799 GMLQ99445 158 aa13.24□□□□□ -0.29
GGA3-210ENST00000580799 MAP3K2Q9Y2U5 619 aa13.24□□□□□ -0.29
GGA3-210ENST00000580799 MED23Q9ULK4 1368 aa13.23□□□□□ -0.29
GGA3-210ENST00000580799 ASTN2O75129 1339 aaPredicted RBP13.23□□□□□ -0.29
GGA3-210ENST00000580799 CTSWP56202 376 aa13.23□□□□□ -0.29
GGA3-210ENST00000580799 NEXNQ0ZGT2 675 aa13.23□□□□□ -0.29
GGA3-210ENST00000580799 SCARF1Q14162 830 aa13.23□□□□□ -0.29
GGA3-210ENST00000580799 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
GGA3-210ENST00000580799 MYOZ2Q9NPC6 264 aa13.23□□□□□ -0.29
GGA3-210ENST00000580799 SPEF2Q9C093 1822 aa13.23□□□□□ -0.29
GGA3-210ENST00000580799 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
GGA3-210ENST00000580799 CCDC85AQ96PX6 553 aaPredicted RBP13.22□□□□□ -0.29
GGA3-210ENST00000580799 STK31Q9BXU1 1019 aa13.22□□□□□ -0.29
GGA3-210ENST00000580799 BSDC1Q9NW68 430 aaPredicted RBP13.22□□□□□ -0.29
GGA3-210ENST00000580799 RNF186Q9NXI6 227 aa13.22□□□□□ -0.29
GGA3-210ENST00000580799 MYO3BQ8WXR4 1341 aa13.21□□□□□ -0.29
GGA3-210ENST00000580799 ZNF646O15015 1829 aaPredicted RBP13.21□□□□□ -0.29
GGA3-210ENST00000580799 PI4KAP2A4QPH2 592 aa13.21□□□□□ -0.29
GGA3-210ENST00000580799 TRPA1O75762 1119 aa13.21□□□□□ -0.29
GGA3-210ENST00000580799 IGKV5-2P06315 115 aa13.21□□□□□ -0.29
GGA3-210ENST00000580799 MMP14P50281 582 aa13.21□□□□□ -0.29
GGA3-210ENST00000580799 OGFOD1Q8N543 542 aa13.21□□□□□ -0.29
GGA3-210ENST00000580799 PI4KAP1Q8N8J0 262 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms