RNA–Protein interactions for RNA: ENST00000580617.5

NCOR1-220, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 1,352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-220ENST00000580617 MAP1SQ66K74 1059 aaPredicted RBP13.3□□□□□ -0.28
NCOR1-220ENST00000580617 ANKRD18AQ8IVF6 992 aa13.3□□□□□ -0.28
NCOR1-220ENST00000580617 PODXL2Q9NZ53 605 aa13.3□□□□□ -0.28
NCOR1-220ENST00000580617 PCNTO95613 3336 aa13.29□□□□□ -0.28
NCOR1-220ENST00000580617 POLR2AP24928 1970 aaKnown RBP13.29□□□□□ -0.28
NCOR1-220ENST00000580617 UFL1O94874 794 aa13.29□□□□□ -0.28
NCOR1-220ENST00000580617 TNIP1Q15025 636 aa13.29□□□□□ -0.28
NCOR1-220ENST00000580617 CNTROBQ8N137 903 aa13.29□□□□□ -0.28
NCOR1-220ENST00000580617 JMYQ8N9B5 988 aa13.29□□□□□ -0.28
NCOR1-220ENST00000580617 EYA3Q99504 573 aa13.29□□□□□ -0.28
NCOR1-220ENST00000580617 PLA2G12BQ9BX93 195 aa13.29□□□□□ -0.28
NCOR1-220ENST00000580617 CREBZFQ9NS37 354 aa13.29□□□□□ -0.28
NCOR1-220ENST00000580617 ANKIB1Q9P2G1 1089 aa13.29□□□□□ -0.28
NCOR1-220ENST00000580617 ZNF646O15015 1829 aaPredicted RBP13.29□□□□□ -0.28
NCOR1-220ENST00000580617 ECE2O60344 883 aa13.28□□□□□ -0.28
NCOR1-220ENST00000580617 DOK7Q18PE1 504 aa13.28□□□□□ -0.28
NCOR1-220ENST00000580617 USP50Q70EL3 339 aaPredicted RBP13.28□□□□□ -0.28
NCOR1-220ENST00000580617 CDC5LQ99459 802 aaKnown RBP13.28□□□□□ -0.28
NCOR1-220ENST00000580617 BCL2L13Q9BXK5 485 aa13.28□□□□□ -0.28
NCOR1-220ENST00000580617 ADARB2Q9NS39 739 aaKnown RBP13.28□□□□□ -0.28
NCOR1-220ENST00000580617 GGA1Q9UJY5 639 aa13.28□□□□□ -0.28
NCOR1-220ENST00000580617 XDHP47989 1333 aa13.28□□□□□ -0.28
NCOR1-220ENST00000580617 SHTN1A0MZ66 631 aa13.27□□□□□ -0.29
NCOR1-220ENST00000580617 CCER2I3L3R5 266 aa13.27□□□□□ -0.29
NCOR1-220ENST00000580617 FAM161AQ3B820 660 aa13.27□□□□□ -0.29
NCOR1-220ENST00000580617 BEND3Q5T5X7 828 aa13.27□□□□□ -0.29
NCOR1-220ENST00000580617 ZC3H12CQ9C0D7 883 aaKnown RBP13.27□□□□□ -0.29
NCOR1-220ENST00000580617 KCNQ5Q9NR82 932 aa13.27□□□□□ -0.29
NCOR1-220ENST00000580617 E9PSI1 815 aa13.26□□□□□ -0.29
NCOR1-220ENST00000580617 PSMD14O00487 310 aa13.26□□□□□ -0.29
NCOR1-220ENST00000580617 BSDC1Q9NW68 430 aaPredicted RBP13.26□□□□□ -0.29
NCOR1-220ENST00000580617 ZBTB12Q9Y330 459 aaPredicted RBP13.26□□□□□ -0.29
NCOR1-220ENST00000580617 WTIPA6NIX2 430 aaPredicted RBP13.25□□□□□ -0.29
NCOR1-220ENST00000580617 TMEM88BA6NKF7 163 aa13.25□□□□□ -0.29
NCOR1-220ENST00000580617 CSF1RP07333 972 aa13.25□□□□□ -0.29
NCOR1-220ENST00000580617 ITGA6P23229 1130 aa13.25□□□□□ -0.29
NCOR1-220ENST00000580617 SLFN5Q08AF3 891 aa13.25□□□□□ -0.29
NCOR1-220ENST00000580617 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
NCOR1-220ENST00000580617 MKRN1Q9UHC7 482 aaKnown RBP13.25□□□□□ -0.29
NCOR1-220ENST00000580617 CNOT7Q9UIV1 285 aaKnown RBP13.25□□□□□ -0.29
NCOR1-220ENST00000580617 MINPP1Q9UNW1 487 aa13.25□□□□□ -0.29
NCOR1-220ENST00000580617 ATP2B4P23634 1241 aa13.24□□□□□ -0.29
NCOR1-220ENST00000580617 IGHMBP2P38935 993 aaKnown RBP13.24□□□□□ -0.29
NCOR1-220ENST00000580617 FMR1Q06787 632 aaKnown RBP eCLIP13.24□□□□□ -0.29
NCOR1-220ENST00000580617 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
NCOR1-220ENST00000580617 MICALL2Q8IY33 904 aa13.24□□□□□ -0.29
NCOR1-220ENST00000580617 TRPM4Q8TD43 1214 aa13.24□□□□□ -0.29
NCOR1-220ENST00000580617 CDCA7LQ96GN5 454 aa13.24□□□□□ -0.29
NCOR1-220ENST00000580617 CNTNAP1P78357 1384 aa13.23□□□□□ -0.29
NCOR1-220ENST00000580617 MED23Q9ULK4 1368 aa13.23□□□□□ -0.29
NCOR1-220ENST00000580617 TRAF5O00463 557 aa13.23□□□□□ -0.29
NCOR1-220ENST00000580617 HIRAP54198 1017 aaPredicted RBP13.23□□□□□ -0.29
NCOR1-220ENST00000580617 FOXO4P98177 505 aa13.23□□□□□ -0.29
NCOR1-220ENST00000580617 MIER1Q8N108 512 aa13.23□□□□□ -0.29
NCOR1-220ENST00000580617 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
NCOR1-220ENST00000580617 DPF2Q92785 391 aa13.23□□□□□ -0.29
NCOR1-220ENST00000580617 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 G3V3G9 751 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 H7C1D1 291 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 GRM8O00222 908 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 CCT4P50991 539 aaKnown RBP13.22□□□□□ -0.29
NCOR1-220ENST00000580617 EPHA10Q5JZY3 1008 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 DCAF8Q5TAQ9 597 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 SAMD7Q7Z3H4 446 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 SSH1Q8WYL5 1049 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 PGAP2Q9UHJ9 254 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 ZNF609O15014 1411 aa13.22□□□□□ -0.29
NCOR1-220ENST00000580617 EGFRP00533 1210 aa13.21□□□□□ -0.29
NCOR1-220ENST00000580617 VIL1P09327 827 aaKnown RBP13.21□□□□□ -0.29
NCOR1-220ENST00000580617 RPS12P25398 132 aaKnown RBP13.21□□□□□ -0.29
NCOR1-220ENST00000580617 TRMT2AQ8IZ69 625 aaKnown RBP13.21□□□□□ -0.29
NCOR1-220ENST00000580617 MPHOSPH8Q99549 860 aa13.21□□□□□ -0.29
NCOR1-220ENST00000580617 C9orf78Q9NZ63 289 aaPredicted RBP13.21□□□□□ -0.29
NCOR1-220ENST00000580617 CHMP3Q9Y3E7 222 aa13.21□□□□□ -0.29
NCOR1-220ENST00000580617 KLRK1P26718 216 aa13.2□□□□□ -0.3
NCOR1-220ENST00000580617 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
NCOR1-220ENST00000580617 LMBR1LQ6UX01 489 aa13.2□□□□□ -0.3
NCOR1-220ENST00000580617 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
NCOR1-220ENST00000580617 GLIS2Q9BZE0 524 aaPredicted RBP13.2□□□□□ -0.3
NCOR1-220ENST00000580617 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
NCOR1-220ENST00000580617 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
NCOR1-220ENST00000580617 PTPRCP08575 1304 aa13.2□□□□□ -0.3
NCOR1-220ENST00000580617 RASSF10A6NK89 507 aa13.2□□□□□ -0.3
NCOR1-220ENST00000580617 CHRNDQ07001 517 aa13.2□□□□□ -0.3
NCOR1-220ENST00000580617 IFIT5Q13325 482 aaKnown RBP13.2□□□□□ -0.3
NCOR1-220ENST00000580617 CST9Q5W186 159 aa13.2□□□□□ -0.3
NCOR1-220ENST00000580617 RSBN1LQ6PCB5 846 aaPredicted RBP13.2□□□□□ -0.3
NCOR1-220ENST00000580617 PODNQ7Z5L7 613 aa13.2□□□□□ -0.3
NCOR1-220ENST00000580617 TXNRD3Q86VQ6 643 aa13.2□□□□□ -0.3
NCOR1-220ENST00000580617 ABT1Q9ULW3 272 aaKnown RBP13.2□□□□□ -0.3
NCOR1-220ENST00000580617 LEMD3Q9Y2U8 911 aa13.2□□□□□ -0.3
NCOR1-220ENST00000580617 THSD7BQ9C0I4 1608 aa13.19□□□□□ -0.3
NCOR1-220ENST00000580617 NBPF7P0C2Y1 421 aaPredicted RBP13.19□□□□□ -0.3
NCOR1-220ENST00000580617 HSPA1AP0DMV8 641 aaKnown RBP13.19□□□□□ -0.3
NCOR1-220ENST00000580617 HSPA1BP0DMV9 641 aaKnown RBP13.19□□□□□ -0.3
NCOR1-220ENST00000580617 VEGFBP49765 207 aa13.19□□□□□ -0.3
NCOR1-220ENST00000580617 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
NCOR1-220ENST00000580617 KAZALD1Q96I82 304 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms