RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 TNRC6CQ9HCJ0 1690 aaKnown RBP17.67■□□□□ 0.42
SKA2-205ENST00000580541 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
SKA2-205ENST00000580541 SIL1Q9H173 461 aa17.66■□□□□ 0.42
SKA2-205ENST00000580541 LRP5O75197 1615 aa17.65■□□□□ 0.42
SKA2-205ENST00000580541 METTL24Q5JXM2 366 aa17.65■□□□□ 0.42
SKA2-205ENST00000580541 RTKN2Q8IZC4 609 aa17.65■□□□□ 0.42
SKA2-205ENST00000580541 KLHDC4Q8TBB5 520 aa17.65■□□□□ 0.42
SKA2-205ENST00000580541 KIF1BPQ96EK5 621 aa17.65■□□□□ 0.42
SKA2-205ENST00000580541 MINPP1Q9UNW1 487 aa17.65■□□□□ 0.42
SKA2-205ENST00000580541 PA2G4Q9UQ80 394 aaKnown RBP17.65■□□□□ 0.42
SKA2-205ENST00000580541 AKAP2Q9Y2D5 859 aa17.65■□□□□ 0.42
SKA2-205ENST00000580541 RIPOR2Q9Y4F9 1068 aa17.65■□□□□ 0.42
SKA2-205ENST00000580541 ANKIB1Q9P2G1 1089 aa17.64■□□□□ 0.41
SKA2-205ENST00000580541 LRRC24Q50LG9 513 aa17.63■□□□□ 0.41
SKA2-205ENST00000580541 NLGN2Q8NFZ4 835 aa17.63■□□□□ 0.41
SKA2-205ENST00000580541 BCS1LQ9Y276 419 aa17.63■□□□□ 0.41
SKA2-205ENST00000580541 EXOC6BQ9Y2D4 811 aa17.63■□□□□ 0.41
SKA2-205ENST00000580541 LEMD3Q9Y2U8 911 aa17.63■□□□□ 0.41
SKA2-205ENST00000580541 DLEC1Q9Y238 1755 aa17.62■□□□□ 0.41
SKA2-205ENST00000580541 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
SKA2-205ENST00000580541 KCNJ4P48050 445 aa17.62■□□□□ 0.41
SKA2-205ENST00000580541 CHRNDQ07001 517 aa17.62■□□□□ 0.41
SKA2-205ENST00000580541 CCDC93Q567U6 631 aa17.62■□□□□ 0.41
SKA2-205ENST00000580541 CENPQQ7L2Z9 268 aaPredicted RBP17.62■□□□□ 0.41
SKA2-205ENST00000580541 ATG9AQ7Z3C6 839 aa17.62■□□□□ 0.41
SKA2-205ENST00000580541 MPNDQ8N594 471 aa17.62■□□□□ 0.41
SKA2-205ENST00000580541 SUPT20HQ8NEM7 779 aa17.62■□□□□ 0.41
SKA2-205ENST00000580541 PUS3Q9BZE2 481 aaKnown RBP17.62■□□□□ 0.41
SKA2-205ENST00000580541 LRRCC1Q9C099 1032 aa17.62■□□□□ 0.41
SKA2-205ENST00000580541 NSFL1CQ9UNZ2 370 aaKnown RBP17.62■□□□□ 0.41
SKA2-205ENST00000580541 XDHP47989 1333 aa17.62■□□□□ 0.41
SKA2-205ENST00000580541 C21orf2O43822 256 aa17.61■□□□□ 0.41
SKA2-205ENST00000580541 PDE8BO95263 885 aa17.61■□□□□ 0.41
SKA2-205ENST00000580541 IGHDP01880 384 aa17.61■□□□□ 0.41
SKA2-205ENST00000580541 ATP2B4P23634 1241 aa17.61■□□□□ 0.41
SKA2-205ENST00000580541 CLASRPQ8N2M8 674 aaKnown RBP17.61■□□□□ 0.41
SKA2-205ENST00000580541 C7orf43Q8WVR3 580 aa17.61■□□□□ 0.41
SKA2-205ENST00000580541 GPR108Q9NPR9 543 aa17.61■□□□□ 0.41
SKA2-205ENST00000580541 PODXL2Q9NZ53 605 aa17.61■□□□□ 0.41
SKA2-205ENST00000580541 COL11A2P13942 1736 aaPredicted RBP17.61■□□□□ 0.41
SKA2-205ENST00000580541 TAF1P21675 1872 aa17.61■□□□□ 0.41
SKA2-205ENST00000580541 UBE4AQ14139 1066 aa17.6■□□□□ 0.41
SKA2-205ENST00000580541 DPP8Q6V1X1 898 aaPredicted RBP17.6■□□□□ 0.41
SKA2-205ENST00000580541 SMC5Q8IY18 1101 aa17.6■□□□□ 0.41
SKA2-205ENST00000580541 RHPN1Q8TCX5 695 aa17.6■□□□□ 0.41
SKA2-205ENST00000580541 GGA1Q9UJY5 639 aa17.6■□□□□ 0.41
SKA2-205ENST00000580541 SLX4Q8IY92 1834 aa17.59■□□□□ 0.41
SKA2-205ENST00000580541 IFIT1P09914 478 aaKnown RBP17.59■□□□□ 0.41
SKA2-205ENST00000580541 PUM3Q15397 648 aaKnown RBP17.59■□□□□ 0.41
SKA2-205ENST00000580541 ANKRD45Q5TZF3 282 aa17.59■□□□□ 0.41
SKA2-205ENST00000580541 EYA3Q99504 573 aa17.59■□□□□ 0.41
SKA2-205ENST00000580541 VPS33BQ9H267 617 aa17.59■□□□□ 0.41
SKA2-205ENST00000580541 ZNF219Q9P2Y4 722 aaPredicted RBP17.59■□□□□ 0.41
SKA2-205ENST00000580541 APBB1O00213 710 aa17.58■□□□□ 0.4
SKA2-205ENST00000580541 SASH1O94885 1247 aa17.58■□□□□ 0.4
SKA2-205ENST00000580541 SLC5A1P13866 664 aa17.58■□□□□ 0.4
SKA2-205ENST00000580541 TFCP2Q12800 502 aa17.58■□□□□ 0.4
SKA2-205ENST00000580541 LPIN2Q92539 896 aa17.58■□□□□ 0.4
SKA2-205ENST00000580541 GTF3C3Q9Y5Q9 886 aa17.58■□□□□ 0.4
SKA2-205ENST00000580541 ZNF804BA4D1E1 1349 aa17.57■□□□□ 0.4
SKA2-205ENST00000580541 C6orf229H3BNL8 230 aa17.57■□□□□ 0.4
SKA2-205ENST00000580541 GRIN3BO60391 1043 aa17.57■□□□□ 0.4
SKA2-205ENST00000580541 GPSM2P81274 684 aa17.57■□□□□ 0.4
SKA2-205ENST00000580541 GPR162Q16538 588 aa17.57■□□□□ 0.4
SKA2-205ENST00000580541 B4GALNT3Q6L9W6 998 aa17.57■□□□□ 0.4
SKA2-205ENST00000580541 HELBQ8NG08 1087 aaPredicted RBP17.57■□□□□ 0.4
SKA2-205ENST00000580541 KIAA1551Q9HCM1 1747 aa17.56■□□□□ 0.4
SKA2-205ENST00000580541 TAF5LO75529 589 aa17.56■□□□□ 0.4
SKA2-205ENST00000580541 UFL1O94874 794 aa17.56■□□□□ 0.4
SKA2-205ENST00000580541 IFIT2P09913 472 aaKnown RBP17.56■□□□□ 0.4
SKA2-205ENST00000580541 ATP2B3Q16720 1220 aa17.56■□□□□ 0.4
SKA2-205ENST00000580541 CAVIN4Q5BKX8 364 aa17.56■□□□□ 0.4
SKA2-205ENST00000580541 PELP1Q8IZL8 1130 aaKnown RBP17.56■□□□□ 0.4
SKA2-205ENST00000580541 VGLL2Q8N8G2 317 aa17.56■□□□□ 0.4
SKA2-205ENST00000580541 PSMD1Q99460 953 aa17.56■□□□□ 0.4
SKA2-205ENST00000580541 ZC3H12CQ9C0D7 883 aaKnown RBP17.56■□□□□ 0.4
SKA2-205ENST00000580541 BRCA1P38398 1863 aaKnown RBP17.56■□□□□ 0.4
SKA2-205ENST00000580541 CACNA1SQ13698 1873 aa17.56■□□□□ 0.4
SKA2-205ENST00000580541 G3V3G9 751 aa17.55■□□□□ 0.4
SKA2-205ENST00000580541 TNNI3KQ59H18 835 aa17.55■□□□□ 0.4
SKA2-205ENST00000580541 GORABQ5T7V8 394 aa17.55■□□□□ 0.4
SKA2-205ENST00000580541 DCAF8Q5TAQ9 597 aa17.55■□□□□ 0.4
SKA2-205ENST00000580541 TBC1D16Q8TBP0 767 aa17.55■□□□□ 0.4
SKA2-205ENST00000580541 NEUROD6Q96NK8 337 aa17.55■□□□□ 0.4
SKA2-205ENST00000580541 RTFDC1Q9BY42 306 aaPredicted RBP17.55■□□□□ 0.4
SKA2-205ENST00000580541 FPGT-TNNI3KV9GXZ4 949 aa17.55■□□□□ 0.4
SKA2-205ENST00000580541 SPEF2Q9C093 1822 aa17.55■□□□□ 0.4
SKA2-205ENST00000580541 FKBP4Q02790 459 aaKnown RBP eCLIP17.54■□□□□ 0.4
SKA2-205ENST00000580541 NUCB1Q02818 461 aa17.54■□□□□ 0.4
SKA2-205ENST00000580541 WASHC4Q2M389 1173 aa17.54■□□□□ 0.4
SKA2-205ENST00000580541 ARHGAP27Q6ZUM4 889 aa17.54■□□□□ 0.4
SKA2-205ENST00000580541 CHD1LQ86WJ1 897 aa17.54■□□□□ 0.4
SKA2-205ENST00000580541 VPS37DQ86XT2 251 aa17.54■□□□□ 0.4
SKA2-205ENST00000580541 GPATCH3Q96I76 525 aa17.54■□□□□ 0.4
SKA2-205ENST00000580541 IL1RAPL2Q9NP60 686 aa17.54■□□□□ 0.4
SKA2-205ENST00000580541 WWC3Q9ULE0 1092 aa17.54■□□□□ 0.4
SKA2-205ENST00000580541 A0A1B0GUL7 405 aa17.53■□□□□ 0.4
SKA2-205ENST00000580541 FGFR2P21802 821 aa17.53■□□□□ 0.4
SKA2-205ENST00000580541 CCDC158Q5M9N0 1113 aa17.53■□□□□ 0.4
SKA2-205ENST00000580541 C15orf52Q6ZUT6 534 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms