RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 ZC3H4Q9UPT8 1303 aaKnown RBP20.58■□□□□ 0.89
RARA-209ENST00000579727 IPO8O15397 1037 aaKnown RBP20.58■□□□□ 0.89
RARA-209ENST00000579727 HSPA1AP0DMV8 641 aaKnown RBP20.58■□□□□ 0.89
RARA-209ENST00000579727 HSPA1BP0DMV9 641 aaKnown RBP20.58■□□□□ 0.89
RARA-209ENST00000579727 ZKSCAN2Q63HK3 967 aa20.58■□□□□ 0.89
RARA-209ENST00000579727 RTFDC1Q9BY42 306 aaPredicted RBP20.58■□□□□ 0.89
RARA-209ENST00000579727 A0A1B0GUL6 1792 aa20.58■□□□□ 0.89
RARA-209ENST00000579727 KDM2BQ8NHM5 1336 aa20.57■□□□□ 0.88
RARA-209ENST00000579727 ANKRD18BA2A2Z9 1011 aa20.57■□□□□ 0.88
RARA-209ENST00000579727 C6orf229H3BNL8 230 aa20.57■□□□□ 0.88
RARA-209ENST00000579727 IGHMBP2P38935 993 aaKnown RBP20.57■□□□□ 0.88
RARA-209ENST00000579727 SUPT20HQ8NEM7 779 aa20.57■□□□□ 0.88
RARA-209ENST00000579727 ZNF594Q96JF6 807 aaPredicted RBP20.57■□□□□ 0.88
RARA-209ENST00000579727 ANKIB1Q9P2G1 1089 aa20.57■□□□□ 0.88
RARA-209ENST00000579727 RIMBP2O15034 1052 aa20.56■□□□□ 0.88
RARA-209ENST00000579727 IFIT5Q13325 482 aaKnown RBP20.56■□□□□ 0.88
RARA-209ENST00000579727 ANKRD44Q8N8A2 993 aa20.56■□□□□ 0.88
RARA-209ENST00000579727 POLLQ9UGP5 575 aa20.56■□□□□ 0.88
RARA-209ENST00000579727 GLTPD2A6NH11 291 aa20.55■□□□□ 0.88
RARA-209ENST00000579727 DDNO94850 711 aaPredicted RBP20.55■□□□□ 0.88
RARA-209ENST00000579727 UFL1O94874 794 aa20.55■□□□□ 0.88
RARA-209ENST00000579727 TBC1D16Q8TBP0 767 aa20.55■□□□□ 0.88
RARA-209ENST00000579727 JDP2Q8WYK2 163 aa20.55■□□□□ 0.88
RARA-209ENST00000579727 MPHOSPH8Q99549 860 aa20.55■□□□□ 0.88
RARA-209ENST00000579727 MEIS3Q99687 375 aa20.55■□□□□ 0.88
RARA-209ENST00000579727 BSDC1Q9NW68 430 aaPredicted RBP20.55■□□□□ 0.88
RARA-209ENST00000579727 WTIPA6NIX2 430 aaPredicted RBP20.54■□□□□ 0.88
RARA-209ENST00000579727 UBTFL1P0CB47 393 aaPredicted RBP20.54■□□□□ 0.88
RARA-209ENST00000579727 CCDC57Q2TAC2 916 aa20.54■□□□□ 0.88
RARA-209ENST00000579727 TAF7LQ5H9L4 462 aa20.54■□□□□ 0.88
RARA-209ENST00000579727 INTS3Q68E01 1043 aaKnown RBP20.54■□□□□ 0.88
RARA-209ENST00000579727 NIM1KQ8IY84 436 aa20.54■□□□□ 0.88
RARA-209ENST00000579727 SMC1BQ8NDV3 1235 aa20.54■□□□□ 0.88
RARA-209ENST00000579727 MINPP1Q9UNW1 487 aa20.54■□□□□ 0.88
RARA-209ENST00000579727 KIAA2012Q0VF49 1180 aa20.53■□□□□ 0.88
RARA-209ENST00000579727 WASHC4Q2M389 1173 aa20.53■□□□□ 0.88
RARA-209ENST00000579727 DPY19L2Q6NUT2 758 aa20.53■□□□□ 0.88
RARA-209ENST00000579727 TMEM57Q8N5G2 664 aa20.53■□□□□ 0.88
RARA-209ENST00000579727 XDHP47989 1333 aa20.53■□□□□ 0.88
RARA-209ENST00000579727 FZD9O00144 591 aa20.52■□□□□ 0.88
RARA-209ENST00000579727 RABL6Q3YEC7 729 aaPredicted RBP20.52■□□□□ 0.88
RARA-209ENST00000579727 PODXL2Q9NZ53 605 aa20.52■□□□□ 0.88
RARA-209ENST00000579727 GGA1Q9UJY5 639 aa20.52■□□□□ 0.88
RARA-209ENST00000579727 FTSJ3Q8IY81 847 aaKnown RBP20.51■□□□□ 0.87
RARA-209ENST00000579727 DBNDD1Q9H9R9 158 aa20.51■□□□□ 0.87
RARA-209ENST00000579727 RCAN3Q9UKA8 241 aa20.51■□□□□ 0.87
RARA-209ENST00000579727 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
RARA-209ENST00000579727 GJA3Q9Y6H8 435 aa20.51■□□□□ 0.87
RARA-209ENST00000579727 RLBP1P12271 317 aa20.5■□□□□ 0.87
RARA-209ENST00000579727 EIF6P56537 245 aaKnown RBP20.5■□□□□ 0.87
RARA-209ENST00000579727 DOK7Q18PE1 504 aa20.5■□□□□ 0.87
RARA-209ENST00000579727 HELBQ8NG08 1087 aaPredicted RBP20.5■□□□□ 0.87
RARA-209ENST00000579727 KLHDC4Q8TBB5 520 aa20.5■□□□□ 0.87
RARA-209ENST00000579727 EYA3Q99504 573 aa20.5■□□□□ 0.87
RARA-209ENST00000579727 CHRNDQ07001 517 aa20.49■□□□□ 0.87
RARA-209ENST00000579727 DZIP1LQ8IYY4 767 aaKnown RBP20.49■□□□□ 0.87
RARA-209ENST00000579727 PUS3Q9BZE2 481 aaKnown RBP20.49■□□□□ 0.87
RARA-209ENST00000579727 VPS33BQ9H267 617 aa20.49■□□□□ 0.87
RARA-209ENST00000579727 SNAP23O00161 211 aa20.48■□□□□ 0.87
RARA-209ENST00000579727 PLIN1O60240 522 aa20.48■□□□□ 0.87
RARA-209ENST00000579727 TAF5LO75529 589 aa20.48■□□□□ 0.87
RARA-209ENST00000579727 ATP2B4P23634 1241 aa20.48■□□□□ 0.87
RARA-209ENST00000579727 LDHAL6AQ6ZMR3 332 aa20.48■□□□□ 0.87
RARA-209ENST00000579727 ZC3H12CQ9C0D7 883 aaKnown RBP20.48■□□□□ 0.87
RARA-209ENST00000579727 CNNM1Q9NRU3 951 aa20.48■□□□□ 0.87
RARA-209ENST00000579727 ZNRF3Q9ULT6 936 aa20.48■□□□□ 0.87
RARA-209ENST00000579727 YDJCA8MPS7 323 aa20.47■□□□□ 0.87
RARA-209ENST00000579727 POTECB2RU33 542 aa20.47■□□□□ 0.87
RARA-209ENST00000579727 ECE2O60344 883 aa20.47■□□□□ 0.87
RARA-209ENST00000579727 RAD17O75943 681 aa20.47■□□□□ 0.87
RARA-209ENST00000579727 ITPRIPQ8IWB1 547 aa20.47■□□□□ 0.87
RARA-209ENST00000579727 PANK1Q8TE04 598 aa20.47■□□□□ 0.87
RARA-209ENST00000579727 SCN9AQ15858 1988 aa20.46■□□□□ 0.87
RARA-209ENST00000579727 KLRK1P26718 216 aa20.46■□□□□ 0.87
RARA-209ENST00000579727 ANKRD2Q9GZV1 360 aa20.46■□□□□ 0.87
RARA-209ENST00000579727 G3V3G9 751 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 SLC34A2O95436 690 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 GNAI3P08754 354 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 KCNJ4P48050 445 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 CXCL9Q07325 125 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 LRRC24Q50LG9 513 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 DCAF8Q5TAQ9 597 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 GPC2Q8N158 579 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 KCNQ5Q9NR82 932 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 SCN4AP35499 1836 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 ZNF804BA4D1E1 1349 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 MED23Q9ULK4 1368 aa20.45■□□□□ 0.86
RARA-209ENST00000579727 VEGFAP15692 232 aaPredicted RBP20.44■□□□□ 0.86
RARA-209ENST00000579727 TXNRD3Q86VQ6 643 aa20.44■□□□□ 0.86
RARA-209ENST00000579727 LEMD3Q9Y2U8 911 aa20.44■□□□□ 0.86
RARA-209ENST00000579727 RFX5P48382 616 aaPredicted RBP20.43■□□□□ 0.86
RARA-209ENST00000579727 CIAPIN1Q6FI81 312 aa20.43■□□□□ 0.86
RARA-209ENST00000579727 C1orf115Q9H7X2 142 aa20.43■□□□□ 0.86
RARA-209ENST00000579727 PSME4Q14997 1843 aa20.42■□□□□ 0.86
RARA-209ENST00000579727 L3MBTL3Q96JM7 780 aaPredicted RBP20.42■□□□□ 0.86
RARA-209ENST00000579727 SIL1Q9H173 461 aa20.42■□□□□ 0.86
RARA-209ENST00000579727 GNAI2P04899 355 aa20.41■□□□□ 0.86
RARA-209ENST00000579727 PTPN12Q05209 780 aaKnown RBP20.41■□□□□ 0.86
RARA-209ENST00000579727 PA2G4Q9UQ80 394 aaKnown RBP20.41■□□□□ 0.86
RARA-209ENST00000579727 HDAC5Q9UQL6 1122 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms